RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 CST9Q5W186 159 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 ARMCX5Q6P1M9 558 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 MTHFD1LQ6UB35 978 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 C1orf186Q6ZWK4 172 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 LRRC8AQ8IWT6 810 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 GALNT16Q8N428 558 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 GALNT4Q8N4A0 578 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 OR6J1Q8NGC5 347 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 GOLGA5Q8TBA6 731 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 SCFD1Q8WVM8 642 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 SEPT1Q8WYJ6 367 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 HVCN1Q96D96 273 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 BICD1Q96G01 975 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 SPATA33Q96N06 139 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 NAP1L5Q96NT1 182 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 FCRL4Q96PJ5 515 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 ACCSQ96QU6 501 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 SNX18Q96RF0 628 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 MMS19Q96T76 1030 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 NUP58Q9BVL2 599 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 FGFBP2Q9BYJ0 223 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 ZNF518BQ9C0D4 1074 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 POLR3FQ9H1D9 316 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 TMEM206Q9H813 350 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 NRBP2Q9NSY0 501 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 KLHL13Q9P2N7 655 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 LPAR3Q9UBY5 353 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 AMFRQ9UKV5 643 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 ZHX1Q9UKY1 873 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 GABRQQ9UN88 632 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 USP22Q9UPT9 525 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 BTBD3Q9Y2F9 522 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 FRMPD3Q5JV73 1810 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 THSD7BQ9C0I4 1608 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 RALGAPA2Q2PPJ7 1873 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 PHLPP2Q6ZVD8 1323 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 GSTTP1A0A1W2PQM5 241 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 LRRIQ4A6NIV6 560 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 MYO1FO00160 1098 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 PDXKO00764 312 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 CLIC2O15247 247 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 SLC16A4O15374 487 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 ZNF500O60304 480 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 RFPL1O75677 317 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 TJP3O95049 919 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 IPO7O95373 1038 aaKnown RBP4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 KRT13P13646 458 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 MARK3P27448 753 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 RGS2P41220 211 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 MATR3P43243 847 aaKnown RBP eCLIP4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 CYP2J2P51589 502 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 CCZ1BP86790 482 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 CCZ1P86791 482 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 MAPK7Q13164 816 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 CCNIQ14094 377 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 SYCP1Q15431 976 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 INSCQ1MX18 579 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 ARHGAP29Q52LW3 1261 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 ZC2HC1CQ53FD0 456 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 RNASE12Q5GAN4 147 aaKnown RBP4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 CELF3Q5SZQ8 465 aaKnown RBP4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 PPP4R4Q6NUP7 873 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 ZDHHC24Q6UX98 284 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 ANO5Q75V66 913 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 APTXQ7Z2E3 356 aaKnown RBP4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 CACNA2D4Q7Z3S7 1137 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 ZBTB8OSQ8IWT0 167 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 RAVER1Q8IY67 606 aaKnown RBP4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 EXOC8Q8IYI6 725 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 FAM186BQ8IYM0 893 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 CHPFQ8IZ52 775 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 ZNF397Q8NF99 534 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 NEK11Q8NG66 645 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 OR56A3Q8NH54 315 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 PRSS3P2Q8NHM4 247 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 DEPTORQ8TB45 409 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 MORC4Q8TE76 937 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 AFAP1L1Q8TED9 768 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 TCP11Q8WWU5 503 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 IQCDQ96DY2 449 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 CCDC51Q96ER9 411 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 EEF2KMTQ96G04 330 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 BAG1Q99933 345 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 JPH2Q9BR39 696 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 THAP7Q9BT49 309 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 DPH1Q9BZG8 443 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 NDST4Q9H3R1 872 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 SMARCAD1Q9H4L7 1026 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 C17orf75Q9HAS0 396 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 SMURF2Q9HAU4 748 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 METTL14Q9HCE5 456 aaKnown RBP4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 POLD4Q9HCU8 107 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 RRAGDQ9NQL2 400 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 ZNHIT6Q9NWK9 470 aaKnown RBP4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 CGNQ9P2M7 1197 aaKnown RBP4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 CPNE7Q9UBL6 633 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 ARMCX3Q9UH62 379 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 ZNF215Q9UL58 517 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 PYCARDQ9ULZ3 195 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 TRAF3IP3Q9Y228 551 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms