RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 VPS4BO75351 444 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 NOL4O94818 638 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 SCAF4O95104 1147 aaKnown RBP6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 KRT19P08727 400 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 SPATA31D3P0C874 917 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 FDXRP22570 491 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 ATICP31939 592 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 RPL9P32969 192 aaKnown RBP6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 PIK3CAP42336 1068 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 KLK7P49862 253 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 WDR5P61964 334 aaKnown RBP6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 RBP5P82980 135 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 GRIK3Q13003 919 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 TBX2Q13207 712 aaPredicted RBP6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 TRPC3Q13507 836 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 PRKD1Q15139 912 aaPredicted RBP6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 NAB2Q15742 525 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 SGSM1Q2NKQ1 1148 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 PDCD4Q53EL6 469 aaKnown RBP6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 KLHDC7AQ5VTJ3 777 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 IZUMO3Q5VZ72 239 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 DPY19L2P1Q6NXN4 242 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 PSRC1Q6PGN9 363 aaPredicted RBP6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 C1orf228Q6PIY5 440 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 TRIM65Q6PJ69 517 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 SPATA31D4Q6ZUB0 917 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 GDF7Q7Z4P5 450 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 TTC9BQ8N6N2 239 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 RNF152Q8N8N0 203 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 SPC24Q8NBT2 197 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 CCDC150Q8NCX0 1101 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 NEK11Q8NG66 645 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 CXorf38Q8TB03 319 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 URGCPQ8TCY9 931 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 RSPH1Q8WYR4 309 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 TAF4BQ92750 862 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 TOP1MTQ969P6 601 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 IQCDQ96DY2 449 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 PDLIM2Q96JY6 352 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 CASD1Q96PB1 797 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 TRIB1Q96RU8 372 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 LBHD1Q9BQE6 289 aaPredicted RBP6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 ZSWIM1Q9BR11 485 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 NUP58Q9BVL2 599 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 COLEC11Q9BWP8 271 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 KRTAP17-1Q9BYP8 105 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 EDEM3Q9BZQ6 932 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 CERS4Q9HA82 394 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 SIX2Q9NPC8 291 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 SERHLQ9NQF3 203 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 FAM207AQ9NSI2 230 aaPredicted RBP6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 ETAA1Q9NY74 926 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 HSFX1Q9UBD0 423 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 TUBGCP4Q9UGJ1 667 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 SIX4Q9UIU6 781 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 CNOT11Q9UKZ1 510 aaKnown RBP6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 CHST2Q9Y4C5 530 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 SCN5AQ14524 2016 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 TANC1Q9C0D5 1861 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 ALPK3Q96L96 1907 aa6.19□□□□□ -1.42
NIFKP3-201ENST00000417799 TTC3P53804 2025 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 CCDC195A0A1B0GUA6 201 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 CCDC78A2IDD5 438 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 MBD3L4A6NDZ8 208 aaPredicted RBP6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 MBD3L3A6NE82 208 aaPredicted RBP6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 GRXCR1A8MXD5 290 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 PIRO00625 290 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 APOL1O14791 398 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 EPHB6O15197 1021 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 GPANK1O95872 356 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 ASS1P00966 412 aaKnown RBP6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 TPM1P09493 284 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 UCHL3P15374 230 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 TRIM21P19474 475 aaKnown RBP6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 ACRV1P26436 265 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 LRPAP1P30533 357 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 CASP14P31944 242 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 GATMP50440 423 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 MYL6P60660 151 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 POLR2FP61218 127 aaKnown RBP6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 NOP14P78316 857 aaKnown RBP6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 HSD11B2P80365 405 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 DEFB103AP81534 67 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 HTRA4P83105 476 aaPredicted RBP6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 DSC1Q08554 894 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 CCDC173Q0VFZ6 552 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 LRMPQ12912 555 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 MYO1EQ12965 1108 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 TRIM14Q14142 442 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 ZNF699Q32M78 642 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 DCAF12L1Q5VU92 463 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 C9orf57Q5W0N0 161 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 HIBCHQ6NVY1 386 aaPredicted RBP6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 ATP11CQ8NB49 1132 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 VPS37AQ8NEZ2 397 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 OR56A3Q8NH54 315 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 CPT1CQ8TCG5 803 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 HERVK_113Q902F9 699 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms