RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 OR13J1Q8NGT2 312 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 SCG3Q8WXD2 468 aaKnown RBP16.91■□□□□ 0.3
SSBP3-205ENST00000417664 E2F7Q96AV8 911 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 TDRD1Q9BXT4 1180 aaKnown RBP16.91■□□□□ 0.3
SSBP3-205ENST00000417664 VPS51Q9UID3 782 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 MID2Q9UJV3 735 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 TLK1Q9UKI8 766 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 APOA4P06727 396 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 RHOP08100 348 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 TCF3P15923 654 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 CRABP2P29373 138 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 CSKP41240 450 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 CCR2P41597 374 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 SLC1A2P43004 574 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 MAPK8P45983 427 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 RGRP47804 291 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 PLK1P53350 603 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 PRAMEP78395 509 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 GRM3Q14832 879 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 TAF1BQ53T94 588 aaPredicted RBP16.91■□□□□ 0.3
SSBP3-205ENST00000417664 ZNF470Q6ECI4 717 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 TRPM8Q7Z2W7 1104 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 CCDC91Q7Z6B0 441 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 CLEC14AQ86T13 490 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 SH3RF2Q8TEC5 729 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 CCT6BQ92526 530 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 C7orf26Q96N11 449 aa16.91■□□□□ 0.3
SSBP3-205ENST00000417664 MYLKQ15746 1914 aa16.9■□□□□ 0.3
SSBP3-205ENST00000417664 ZNF197O14709 1029 aa16.9■□□□□ 0.3
SSBP3-205ENST00000417664 GRM6O15303 877 aa16.9■□□□□ 0.3
SSBP3-205ENST00000417664 SNAP91O60641 907 aa16.9■□□□□ 0.3
SSBP3-205ENST00000417664 CLASP2O75122 1294 aaKnown RBP16.9■□□□□ 0.3
SSBP3-205ENST00000417664 PROCP04070 461 aa16.9■□□□□ 0.3
SSBP3-205ENST00000417664 C2P06681 752 aa16.9■□□□□ 0.3
SSBP3-205ENST00000417664 GJA1P17302 382 aa16.9■□□□□ 0.3
SSBP3-205ENST00000417664 BGNP21810 368 aa16.9■□□□□ 0.3
SSBP3-205ENST00000417664 PSMA3P25788 255 aa16.9■□□□□ 0.3
SSBP3-205ENST00000417664 GABRB3P28472 473 aa16.9■□□□□ 0.3
SSBP3-205ENST00000417664 ALDH3A1P30838 453 aa16.9■□□□□ 0.3
SSBP3-205ENST00000417664 LEPRP48357 1165 aaKnown RBP16.9■□□□□ 0.3
SSBP3-205ENST00000417664 CORO7P57737 925 aa16.9■□□□□ 0.3
SSBP3-205ENST00000417664 AP1S1P61966 158 aa16.9■□□□□ 0.3
SSBP3-205ENST00000417664 POU4F1Q01851 419 aa16.9■□□□□ 0.3
SSBP3-205ENST00000417664 CAMK1Q14012 370 aa16.9■□□□□ 0.3
SSBP3-205ENST00000417664 USP10Q14694 798 aaKnown RBP16.9■□□□□ 0.3
SSBP3-205ENST00000417664 SMAD1Q15797 465 aaKnown RBP16.9■□□□□ 0.3
SSBP3-205ENST00000417664 LACTB2Q53H82 288 aaPredicted RBP16.9■□□□□ 0.3
SSBP3-205ENST00000417664 NCEH1Q6PIU2 408 aa16.9■□□□□ 0.3
SSBP3-205ENST00000417664 CMC1Q7Z7K0 106 aa16.9■□□□□ 0.3
SSBP3-205ENST00000417664 DENND6AQ8IWF6 608 aa16.9■□□□□ 0.3
SSBP3-205ENST00000417664 ATXN7L3BQ96GX2 97 aa16.9■□□□□ 0.3
SSBP3-205ENST00000417664 TSNARE1Q96NA8 513 aa16.9■□□□□ 0.3
SSBP3-205ENST00000417664 TDP1Q9NUW8 608 aa16.9■□□□□ 0.3
SSBP3-205ENST00000417664 HCFC1R1Q9NWW0 138 aa16.9■□□□□ 0.3
SSBP3-205ENST00000417664 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.9■□□□□ 0.3
SSBP3-205ENST00000417664 TBC1D14Q9P2M4 693 aa16.9■□□□□ 0.3
SSBP3-205ENST00000417664 SLC39A10Q9ULF5 831 aa16.9■□□□□ 0.3
SSBP3-205ENST00000417664 ACTL7AQ9Y615 435 aa16.9■□□□□ 0.3
SSBP3-205ENST00000417664 USH1CQ9Y6N9 552 aa16.9■□□□□ 0.3
SSBP3-205ENST00000417664 RFPL2O75678 378 aa16.89■□□□□ 0.29
SSBP3-205ENST00000417664 GJB3O75712 270 aa16.89■□□□□ 0.29
SSBP3-205ENST00000417664 HOXB8P17481 243 aaPredicted RBP16.89■□□□□ 0.29
SSBP3-205ENST00000417664 CSNK1DP48730 415 aa16.89■□□□□ 0.29
SSBP3-205ENST00000417664 CLCN5P51795 746 aa16.89■□□□□ 0.29
SSBP3-205ENST00000417664 RHOAP61586 193 aa16.89■□□□□ 0.29
SSBP3-205ENST00000417664 TMPRSS15P98073 1019 aa16.89■□□□□ 0.29
SSBP3-205ENST00000417664 CTBP1Q13363 440 aa16.89■□□□□ 0.29
SSBP3-205ENST00000417664 TAF1AQ15573 450 aaPredicted RBP16.89■□□□□ 0.29
SSBP3-205ENST00000417664 PPM1JQ5JR12 505 aa16.89■□□□□ 0.29
SSBP3-205ENST00000417664 RNF187Q5TA31 235 aaPredicted RBP16.89■□□□□ 0.29
SSBP3-205ENST00000417664 CILP2Q8IUL8 1156 aa16.89■□□□□ 0.29
SSBP3-205ENST00000417664 KIAA1958Q8N8K9 716 aa16.89■□□□□ 0.29
SSBP3-205ENST00000417664 GPR150Q8NGU9 434 aa16.89■□□□□ 0.29
SSBP3-205ENST00000417664 BLOC1S5Q8TDH9 187 aa16.89■□□□□ 0.29
SSBP3-205ENST00000417664 SREK1Q8WXA9 508 aaKnown RBP16.89■□□□□ 0.29
SSBP3-205ENST00000417664 HDAC10Q969S8 669 aa16.89■□□□□ 0.29
SSBP3-205ENST00000417664 RMDN1Q96DB5 314 aa16.89■□□□□ 0.29
SSBP3-205ENST00000417664 TRIM55Q9BYV6 548 aa16.89■□□□□ 0.29
SSBP3-205ENST00000417664 ACTR5Q9H9F9 607 aaPredicted RBP16.89■□□□□ 0.29
SSBP3-205ENST00000417664 HACD3Q9P035 362 aa16.89■□□□□ 0.29
SSBP3-205ENST00000417664 LHX3Q9UBR4 397 aa16.89■□□□□ 0.29
SSBP3-205ENST00000417664 GGT7Q9UJ14 662 aa16.89■□□□□ 0.29
SSBP3-205ENST00000417664 EMCNQ9ULC0 261 aa16.89■□□□□ 0.29
SSBP3-205ENST00000417664 CORO1CQ9ULV4 474 aaPredicted RBP16.89■□□□□ 0.29
SSBP3-205ENST00000417664 CHKBQ9Y259 395 aa16.89■□□□□ 0.29
SSBP3-205ENST00000417664 RAI2Q9Y5P3 530 aa16.89■□□□□ 0.29
SSBP3-205ENST00000417664 HELZP42694 1942 aaKnown RBP16.89■□□□□ 0.29
SSBP3-205ENST00000417664 FAM95CA0A1B0GW59 222 aa16.88■□□□□ 0.29
SSBP3-205ENST00000417664 C2orf81A6NN90 581 aa16.88■□□□□ 0.29
SSBP3-205ENST00000417664 MOSPD3O75425 235 aa16.88■□□□□ 0.29
SSBP3-205ENST00000417664 RPP40O75818 363 aaKnown RBP16.88■□□□□ 0.29
SSBP3-205ENST00000417664 PRLP01236 227 aa16.88■□□□□ 0.29
SSBP3-205ENST00000417664 STMN1P16949 149 aa16.88■□□□□ 0.29
SSBP3-205ENST00000417664 GRK2P25098 689 aa16.88■□□□□ 0.29
SSBP3-205ENST00000417664 IRS1P35568 1242 aa16.88■□□□□ 0.29
SSBP3-205ENST00000417664 RAB10P61026 200 aa16.88■□□□□ 0.29
SSBP3-205ENST00000417664 CCDC15Q0P6D6 951 aa16.88■□□□□ 0.29
SSBP3-205ENST00000417664 GALNT3Q14435 633 aa16.88■□□□□ 0.29
SSBP3-205ENST00000417664 TEAD2Q15562 447 aa16.88■□□□□ 0.29
SSBP3-205ENST00000417664 MRNIPQ6NTE8 343 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms