RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 OSBPL10Q9BXB5 764 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 SLC13A1Q9BZW2 595 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 UNKQ9C0B0 810 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 NXF3Q9H4D5 531 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 PCIF1Q9H4Z3 704 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 CLK4Q9HAZ1 481 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 AGO4Q9HCK5 861 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 CD248Q9HCU0 757 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 TCF7L2Q9NQB0 619 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 ACSS2Q9NR19 701 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 MBNL3Q9NUK0 354 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 MYO1AQ9UBC5 1043 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 ASH2LQ9UBL3 628 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 AFF4Q9UHB7 1163 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 TUBD1Q9UJT1 453 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 ZNF180Q9UJW8 692 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 L1RE1Q9UN81 338 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 CELSR2Q9HCU4 2923 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 ANK1P16157 1881 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 TDRD15B5MCY1 1934 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 CEP192Q8TEP8 1941 aa5.68□□□□□ -1.5
ECHDC1-206ENST00000417628 CABIN1Q9Y6J0 2220 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 ARID2Q68CP9 1835 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 MTORP42345 2549 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 TCRBV5S2A0A599 114 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 LRRD1A4D1F6 860 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 TMEM189-UBE2V1I3L0A0 370 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 MEIS2O14770 477 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 N4BP3O15049 544 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 TRAPPC3O43617 180 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 DFNA5O60443 496 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 BUB1BO60566 1050 aaPredicted RBP5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 NADKO95544 446 aaPredicted RBP5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 GSTA1P08263 222 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 RBP3P10745 1247 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 PTPN1P18031 435 aaKnown RBP5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 AKAP5P24588 427 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 GABRR2P28476 465 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 AVPR1AP37288 418 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 GDNFP39905 211 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 LIFRP42702 1097 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 GPR3P46089 330 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 PEX5P50542 639 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 DUSP3P51452 185 aaPredicted RBP5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 EPHB3P54753 998 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 SCAND1P57086 179 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 BASP1P80723 227 aaKnown RBP5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 PDE1BQ01064 536 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 COX10Q12887 443 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 ZBTB17Q13105 803 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 CUL4AQ13619 759 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 CATSPEREQ5SY80 951 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 DCAF12L1Q5VU92 463 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 ARMC3Q5W041 872 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 NXNQ6DKJ4 435 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 NOTUMQ6P988 496 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 C3orf62Q6ZUJ4 267 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 NLRP9Q7RTR0 991 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 HEATR4Q86WZ0 1026 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 SLC15A3Q8IY34 581 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 CEP57L1Q8IYX8 460 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 SAMD14Q8IZD0 417 aaPredicted RBP5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 CMTM8Q8IZV2 173 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 RNF10Q8N5U6 811 aaKnown RBP5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 ESX1Q8N693 406 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 JPH3Q8WXH2 748 aaPredicted RBP5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 CTNNBL1Q8WYA6 563 aaPredicted RBP5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 SEC14L1Q92503 715 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 TBC1D31Q96DN5 1066 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 CCDC51Q96ER9 411 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 SNF8Q96H20 258 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 CCDC120Q96HB5 630 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 C16orf92Q96LL3 132 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 GDAP1L1Q96MZ0 367 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 MAP3K14Q99558 947 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 MXRA8Q9BRK3 442 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 NAT10Q9H0A0 1025 aaKnown RBP5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 TMEM245Q9H330 911 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 FAM204AQ9H8W3 233 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 SLC40A1Q9NP59 571 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 DUS2Q9NX74 493 aaKnown RBP5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 GALNT8Q9NY28 637 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 MYOTQ9UBF9 498 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 IP6K2Q9UHH9 426 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 TTC7AQ9ULT0 858 aaPredicted RBP5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 CCL26Q9Y258 94 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 ANKRD6Q9Y2G4 727 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 ZDHHC9Q9Y397 364 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 PCDHGA9Q9Y5G4 932 aaKnown RBP5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 PCDHGA8Q9Y5G5 932 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 PCDHGA7Q9Y5G6 932 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 PCDHGA6Q9Y5G7 932 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 PCDHGA3Q9Y5H0 932 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 ATP6V1DQ9Y5K8 247 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 MYLKQ15746 1914 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 MED13LQ71F56 2210 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 LRRK1Q38SD2 2015 aa5.67□□□□□ -1.5
ECHDC1-206ENST00000417628 GOLGA8BA8MQT2 603 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 E7ENQ6 273 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 H7C4K7 107 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms