RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 FAM47DPA6NHR8 397 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 C16orf96A6NNT2 1141 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 NDUFS2O75306 463 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 ZNF217O75362 1048 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 ZNF821O75541 412 aaPredicted RBP8.54□□□□□ -1.04
TRIM48-201ENST00000417545 GJB3O75712 270 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 HEXIM1O94992 359 aaKnown RBP8.54□□□□□ -1.04
TRIM48-201ENST00000417545 METTL18O95568 372 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 SLC4A1P02730 911 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 GABRG2P18507 467 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 CR2P20023 1033 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 CD68P34810 354 aaPredicted RBP8.54□□□□□ -1.04
TRIM48-201ENST00000417545 WNT3AP56704 352 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 FAM193AP78312 1265 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 SKOR1P84550 965 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 CSTF1Q05048 431 aaKnown RBP8.54□□□□□ -1.04
TRIM48-201ENST00000417545 ELP6Q0PNE2 266 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 TRAF2Q12933 501 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 ARHGEF7Q14155 803 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 GALNT3Q14435 633 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 SLC14A2Q15849 920 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 GLE1Q53GS7 698 aaKnown RBP8.54□□□□□ -1.04
TRIM48-201ENST00000417545 TMEM31Q5JXX7 168 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 ALG1LQ6GMV1 187 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.54□□□□□ -1.04
TRIM48-201ENST00000417545 USP45Q70EL2 814 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 ERN2Q76MJ5 926 aaKnown RBP8.54□□□□□ -1.04
TRIM48-201ENST00000417545 BMP8AQ7Z5Y6 402 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 TTC7BQ86TV6 843 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 PPIL6Q8IXY8 311 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 ZNF687Q8N1G0 1237 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 MMGT1Q8N4V1 131 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 PDCD7Q8N8D1 485 aaKnown RBP8.54□□□□□ -1.04
TRIM48-201ENST00000417545 DTWD2Q8NBA8 298 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 ARRDC2Q8TBH0 407 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 SLCO2A1Q92959 643 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 FEM1CQ96JP0 617 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 APOL2Q9BQE5 337 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 C1QTNF1Q9BXJ1 281 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 TDRD1Q9BXT4 1180 aaKnown RBP8.54□□□□□ -1.04
TRIM48-201ENST00000417545 SLC6A17Q9H1V8 727 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 PABPC3Q9H361 631 aaKnown RBP8.54□□□□□ -1.04
TRIM48-201ENST00000417545 POLR3BQ9NW08 1133 aaPredicted RBP8.54□□□□□ -1.04
TRIM48-201ENST00000417545 FBXL12Q9NXK8 326 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 TPX2Q9ULW0 747 aaKnown RBP8.54□□□□□ -1.04
TRIM48-201ENST00000417545 UNC80Q8N2C7 3258 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 PRR33A8MZF0 331 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 UPK3BL1B0FP48 263 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 UPK3BL2E5RIL1 263 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 AP3B1O00203 1094 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 DNALI1O14645 258 aaPredicted RBP8.53□□□□□ -1.04
TRIM48-201ENST00000417545 RIOK3O14730 519 aaKnown RBP8.53□□□□□ -1.04
TRIM48-201ENST00000417545 AXIN1O15169 862 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 PCDH8O95206 1070 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 PGLSO95336 258 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 SLC34A2O95436 690 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 AP2A1O95782 977 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 NDST3O95803 873 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 FGF1P05230 155 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 CTSLP07711 333 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 RHOXF2BP0C7M4 288 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 CTPS1P17812 591 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 HLA-DPA1P20036 260 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 OXTRP30559 389 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 PTGIRP43119 386 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 GRIA4P48058 902 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 PXNP49023 591 aaPredicted RBP8.53□□□□□ -1.04
TRIM48-201ENST00000417545 SUOXP51687 545 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 COPAP53621 1224 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 RPL26P61254 145 aaKnown RBP8.53□□□□□ -1.04
TRIM48-201ENST00000417545 TUBB4BP68371 445 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 MRPS25P82663 173 aaKnown RBP8.53□□□□□ -1.04
TRIM48-201ENST00000417545 SLC7A5Q01650 507 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 GUCY2DQ02846 1103 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 FZD5Q13467 585 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 SEMA5AQ13591 1074 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 SEPT6Q14141 434 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 GAS6Q14393 721 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 SPARCL1Q14515 664 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 HLTFQ14527 1009 aaKnown RBP eCLIP8.53□□□□□ -1.04
TRIM48-201ENST00000417545 USP39Q53GS9 565 aaKnown RBP8.53□□□□□ -1.04
TRIM48-201ENST00000417545 PARS2Q7L3T8 475 aaKnown RBP8.53□□□□□ -1.04
TRIM48-201ENST00000417545 C1orf210Q8IVY1 113 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 TMEM105Q8N8V8 129 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 GLIS1Q8NBF1 620 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 MDGA1Q8NFP4 955 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 OR14C36Q8NHC7 312 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 HCAR2Q8TDS4 363 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 CXorf40AQ8TE69 158 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 RAB7BQ96AH8 199 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 ARRDC3Q96B67 414 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 OXNAD1Q96HP4 312 aaPredicted RBP8.53□□□□□ -1.04
TRIM48-201ENST00000417545 ZNF419Q96HQ0 510 aaPredicted RBP8.53□□□□□ -1.04
TRIM48-201ENST00000417545 MRGPRX1Q96LB2 322 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 SRPK1Q96SB4 655 aaKnown RBP8.53□□□□□ -1.04
TRIM48-201ENST00000417545 FAM129BQ96TA1 746 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 RHOXF2Q9BQY4 288 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 ERP44Q9BS26 406 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 LRRC1Q9BTT6 524 aa8.53□□□□□ -1.04
TRIM48-201ENST00000417545 MLPHQ9BV36 600 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms