RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 ZCCHC8Q6NZY4 707 aaKnown RBP25.59■■□□□ 1.69
VEGFA-208ENST00000417285 BRAT1Q6PJG6 821 aa25.59■■□□□ 1.69
VEGFA-208ENST00000417285 RFX8Q6ZV50 586 aa25.59■■□□□ 1.69
VEGFA-208ENST00000417285 NETO2Q8NC67 525 aa25.59■■□□□ 1.69
VEGFA-208ENST00000417285 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.59■■□□□ 1.69
VEGFA-208ENST00000417285 TRIM7Q9C029 511 aa25.59■■□□□ 1.69
VEGFA-208ENST00000417285 SLC39A8Q9C0K1 460 aa25.59■■□□□ 1.69
VEGFA-208ENST00000417285 SPASTQ9UBP0 616 aa25.59■■□□□ 1.69
VEGFA-208ENST00000417285 SALL4Q9UJQ4 1053 aa25.59■■□□□ 1.69
VEGFA-208ENST00000417285 IGSF10Q6WRI0 2623 aa25.58■■□□□ 1.69
VEGFA-208ENST00000417285 TMEM110-MUSTN1A8MSY1 372 aa25.58■■□□□ 1.69
VEGFA-208ENST00000417285 INSIG1O15503 277 aa25.58■■□□□ 1.69
VEGFA-208ENST00000417285 OPA1O60313 960 aa25.58■■□□□ 1.69
VEGFA-208ENST00000417285 MIPP30301 263 aa25.58■■□□□ 1.69
VEGFA-208ENST00000417285 ZBED6P86452 979 aa25.58■■□□□ 1.69
VEGFA-208ENST00000417285 CA9Q16790 459 aa25.58■■□□□ 1.69
VEGFA-208ENST00000417285 COL28A1Q2UY09 1125 aa25.58■■□□□ 1.69
VEGFA-208ENST00000417285 CFAP58Q5T655 872 aa25.58■■□□□ 1.69
VEGFA-208ENST00000417285 HGSNATQ68CP4 663 aa25.58■■□□□ 1.69
VEGFA-208ENST00000417285 LZTR1Q8N653 840 aa25.58■■□□□ 1.69
VEGFA-208ENST00000417285 CELF6Q96J87 481 aaKnown RBP25.58■■□□□ 1.69
VEGFA-208ENST00000417285 TBATAQ96M53 351 aa25.58■■□□□ 1.69
VEGFA-208ENST00000417285 PEBP4Q96S96 227 aa25.58■■□□□ 1.69
VEGFA-208ENST00000417285 ABCG4Q9H172 646 aa25.58■■□□□ 1.69
VEGFA-208ENST00000417285 KLF15Q9UIH9 416 aa25.58■■□□□ 1.69
VEGFA-208ENST00000417285 TSPAN11A1L157 253 aa25.57■■□□□ 1.68
VEGFA-208ENST00000417285 PALMO75781 387 aa25.57■■□□□ 1.68
VEGFA-208ENST00000417285 NEBLO76041 1014 aa25.57■■□□□ 1.68
VEGFA-208ENST00000417285 SERPING1P05155 500 aa25.57■■□□□ 1.68
VEGFA-208ENST00000417285 ERCC2P18074 760 aa25.57■■□□□ 1.68
VEGFA-208ENST00000417285 PCK1P35558 622 aa25.57■■□□□ 1.68
VEGFA-208ENST00000417285 PEX5P50542 639 aa25.57■■□□□ 1.68
VEGFA-208ENST00000417285 NSUN2Q08J23 767 aaKnown RBP eCLIP25.57■■□□□ 1.68
VEGFA-208ENST00000417285 EIF2B5Q13144 721 aaKnown RBP25.57■■□□□ 1.68
VEGFA-208ENST00000417285 RFTN1Q14699 578 aaPredicted RBP25.57■■□□□ 1.68
VEGFA-208ENST00000417285 ZSCAN23Q3MJ62 389 aa25.57■■□□□ 1.68
VEGFA-208ENST00000417285 LRRC73Q5JTD7 316 aa25.57■■□□□ 1.68
VEGFA-208ENST00000417285 AFMIDQ63HM1 303 aa25.57■■□□□ 1.68
VEGFA-208ENST00000417285 ERAP2Q6P179 960 aa25.57■■□□□ 1.68
VEGFA-208ENST00000417285 EXOC2Q96KP1 924 aa25.57■■□□□ 1.68
VEGFA-208ENST00000417285 KCTD15Q96SI1 283 aaPredicted RBP25.57■■□□□ 1.68
VEGFA-208ENST00000417285 IL12RB2Q99665 862 aa25.57■■□□□ 1.68
VEGFA-208ENST00000417285 CAPN11Q9UMQ6 739 aa25.57■■□□□ 1.68
VEGFA-208ENST00000417285 LRCH4O75427 683 aa25.56■■□□□ 1.68
VEGFA-208ENST00000417285 ITIH2P19823 946 aa25.56■■□□□ 1.68
VEGFA-208ENST00000417285 SEMG2Q02383 582 aa25.56■■□□□ 1.68
VEGFA-208ENST00000417285 LRRC14Q15048 493 aa25.56■■□□□ 1.68
VEGFA-208ENST00000417285 BOLA3Q53S33 107 aa25.56■■□□□ 1.68
VEGFA-208ENST00000417285 PPP6R3Q5H9R7 873 aaPredicted RBP25.56■■□□□ 1.68
VEGFA-208ENST00000417285 TPRG1LQ5T0D9 272 aa25.56■■□□□ 1.68
VEGFA-208ENST00000417285 SRLQ86TD4 932 aa25.56■■□□□ 1.68
VEGFA-208ENST00000417285 PDZD3Q86UT5 571 aa25.56■■□□□ 1.68
VEGFA-208ENST00000417285 TP53I13Q8NBR0 393 aaPredicted RBP25.56■■□□□ 1.68
VEGFA-208ENST00000417285 LMX1AQ8TE12 382 aa25.56■■□□□ 1.68
VEGFA-208ENST00000417285 CPLX3Q8WVH0 158 aa25.56■■□□□ 1.68
VEGFA-208ENST00000417285 WRAP53Q9BUR4 548 aaKnown RBP25.56■■□□□ 1.68
VEGFA-208ENST00000417285 SLC13A1Q9BZW2 595 aa25.56■■□□□ 1.68
VEGFA-208ENST00000417285 ATP13A3Q9H7F0 1226 aa25.56■■□□□ 1.68
VEGFA-208ENST00000417285 IFNKQ9P0W0 207 aa25.56■■□□□ 1.68
VEGFA-208ENST00000417285 LUC7L2Q9Y383 392 aaKnown RBP25.56■■□□□ 1.68
VEGFA-208ENST00000417285 BUB1BO60566 1050 aaPredicted RBP25.55■■□□□ 1.68
VEGFA-208ENST00000417285 PIGNO95427 931 aa25.55■■□□□ 1.68
VEGFA-208ENST00000417285 SERPINA4P29622 427 aa25.55■■□□□ 1.68
VEGFA-208ENST00000417285 IGFALSP35858 605 aa25.55■■□□□ 1.68
VEGFA-208ENST00000417285 EIF4A3P38919 411 aaKnown RBP25.55■■□□□ 1.68
VEGFA-208ENST00000417285 POLR2LP62875 67 aaKnown RBP25.55■■□□□ 1.68
VEGFA-208ENST00000417285 AGERQ15109 404 aa25.55■■□□□ 1.68
VEGFA-208ENST00000417285 SKOR2Q2VWA4 1001 aaPredicted RBP25.55■■□□□ 1.68
VEGFA-208ENST00000417285 CDCP2Q5VXM1 449 aa25.55■■□□□ 1.68
VEGFA-208ENST00000417285 MACC1Q6ZN28 852 aa25.55■■□□□ 1.68
VEGFA-208ENST00000417285 GLMNQ92990 594 aa25.55■■□□□ 1.68
VEGFA-208ENST00000417285 CAAP1Q9H8G2 361 aa25.55■■□□□ 1.68
VEGFA-208ENST00000417285 ZWILCHQ9H900 591 aa25.55■■□□□ 1.68
VEGFA-208ENST00000417285 PCDH12Q9NPG4 1184 aa25.55■■□□□ 1.68
VEGFA-208ENST00000417285 MBNL1Q9NR56 388 aaKnown RBP25.55■■□□□ 1.68
VEGFA-208ENST00000417285 TDRD6O60522 2096 aaKnown RBP25.54■■□□□ 1.68
VEGFA-208ENST00000417285 LY6G6EA0A0G2JKS1 128 aa25.54■■□□□ 1.68
VEGFA-208ENST00000417285 CFAP69A5D8W1 941 aa25.54■■□□□ 1.68
VEGFA-208ENST00000417285 TPM3P06753 285 aa25.54■■□□□ 1.68
VEGFA-208ENST00000417285 RPIAP49247 311 aa25.54■■□□□ 1.68
VEGFA-208ENST00000417285 BLKP51451 505 aa25.54■■□□□ 1.68
VEGFA-208ENST00000417285 RENBPP51606 427 aa25.54■■□□□ 1.68
VEGFA-208ENST00000417285 IL10RBQ08334 325 aa25.54■■□□□ 1.68
VEGFA-208ENST00000417285 FAXCQ5TGI0 409 aa25.54■■□□□ 1.68
VEGFA-208ENST00000417285 CYP4V2Q6ZWL3 525 aaPredicted RBP25.54■■□□□ 1.68
VEGFA-208ENST00000417285 CAMK1DQ8IU85 385 aa25.54■■□□□ 1.68
VEGFA-208ENST00000417285 ARHGAP12Q8IWW6 846 aa25.54■■□□□ 1.68
VEGFA-208ENST00000417285 TSEN2Q8NCE0 465 aaKnown RBP25.54■■□□□ 1.68
VEGFA-208ENST00000417285 TPCN2Q8NHX9 752 aa25.54■■□□□ 1.68
VEGFA-208ENST00000417285 DEPDC7Q96QD5 511 aa25.54■■□□□ 1.68
VEGFA-208ENST00000417285 SP110Q9HB58 689 aa25.54■■□□□ 1.68
VEGFA-208ENST00000417285 CWC15Q9P013 229 aaKnown RBP25.54■■□□□ 1.68
VEGFA-208ENST00000417285 APOBEC3BQ9UH17 382 aaKnown RBP25.54■■□□□ 1.68
VEGFA-208ENST00000417285 U3KQA8 63 aa25.54■■□□□ 1.68
VEGFA-208ENST00000417285 CELSR3Q9NYQ7 3312 aa25.53■■□□□ 1.68
VEGFA-208ENST00000417285 LMO7DNF2Z398 122 aa25.53■■□□□ 1.68
VEGFA-208ENST00000417285 DFFAO00273 331 aa25.53■■□□□ 1.68
VEGFA-208ENST00000417285 RRP8O43159 456 aaKnown RBP25.53■■□□□ 1.68
VEGFA-208ENST00000417285 PPARDQ03181 441 aa25.53■■□□□ 1.68
VEGFA-208ENST00000417285 PRRT3Q5FWE3 981 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms