RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 CYP4F3Q08477 520 aa25.22■■□□□ 1.63
HLA-C-204ENST00000415537 DPYSQ14117 519 aa25.22■■□□□ 1.63
HLA-C-204ENST00000415537 DPYSL2Q16555 572 aa25.22■■□□□ 1.63
HLA-C-204ENST00000415537 ZSCAN23Q3MJ62 389 aa25.22■■□□□ 1.63
HLA-C-204ENST00000415537 TMEM52BQ4KMG9 183 aa25.22■■□□□ 1.63
HLA-C-204ENST00000415537 NPWQ8N729 165 aa25.22■■□□□ 1.63
HLA-C-204ENST00000415537 STAU2Q9NUL3 570 aaKnown RBP eCLIP25.22■■□□□ 1.63
HLA-C-204ENST00000415537 EVA1BQ9NVM1 165 aa25.22■■□□□ 1.63
HLA-C-204ENST00000415537 IP6K2Q9UHH9 426 aa25.22■■□□□ 1.63
HLA-C-204ENST00000415537 ANAPC7Q9UJX3 599 aa25.22■■□□□ 1.63
HLA-C-204ENST00000415537 KNTC1P50748 2209 aa25.21■■□□□ 1.63
HLA-C-204ENST00000415537 TOR1BO14657 336 aa25.21■■□□□ 1.63
HLA-C-204ENST00000415537 BUB1BO60566 1050 aaPredicted RBP25.21■■□□□ 1.63
HLA-C-204ENST00000415537 JUNDP17535 347 aa25.21■■□□□ 1.63
HLA-C-204ENST00000415537 IL1R2P27930 398 aa25.21■■□□□ 1.63
HLA-C-204ENST00000415537 IGFALSP35858 605 aa25.21■■□□□ 1.63
HLA-C-204ENST00000415537 YPEL5P62699 121 aa25.21■■□□□ 1.63
HLA-C-204ENST00000415537 ALKBH5Q6P6C2 394 aaKnown RBP25.21■■□□□ 1.63
HLA-C-204ENST00000415537 ARHGAP36Q6ZRI8 547 aa25.21■■□□□ 1.63
HLA-C-204ENST00000415537 CAMK1DQ8IU85 385 aa25.21■■□□□ 1.63
HLA-C-204ENST00000415537 BTN2A2Q8WVV5 523 aa25.21■■□□□ 1.63
HLA-C-204ENST00000415537 NUP85Q9BW27 656 aa25.21■■□□□ 1.63
HLA-C-204ENST00000415537 CAAP1Q9H8G2 361 aa25.21■■□□□ 1.63
HLA-C-204ENST00000415537 PCDH12Q9NPG4 1184 aa25.21■■□□□ 1.63
HLA-C-204ENST00000415537 DKK4Q9UBT3 224 aa25.21■■□□□ 1.63
HLA-C-204ENST00000415537 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.21■■□□□ 1.63
HLA-C-204ENST00000415537 A0A087X0T9 212 aa25.2■■□□□ 1.62
HLA-C-204ENST00000415537 TSPAN11A1L157 253 aa25.2■■□□□ 1.62
HLA-C-204ENST00000415537 NEBLO76041 1014 aa25.2■■□□□ 1.62
HLA-C-204ENST00000415537 FAM228BP0C875 321 aa25.2■■□□□ 1.62
HLA-C-204ENST00000415537 GIMD1P0DJR0 217 aa25.2■■□□□ 1.62
HLA-C-204ENST00000415537 CKMT1AP12532 417 aa25.2■■□□□ 1.62
HLA-C-204ENST00000415537 RGRP47804 291 aa25.2■■□□□ 1.62
HLA-C-204ENST00000415537 DUSP3P51452 185 aaPredicted RBP25.2■■□□□ 1.62
HLA-C-204ENST00000415537 RENBPP51606 427 aa25.2■■□□□ 1.62
HLA-C-204ENST00000415537 BCL2L1Q07817 233 aa25.2■■□□□ 1.62
HLA-C-204ENST00000415537 NSUN2Q08J23 767 aaKnown RBP eCLIP25.2■■□□□ 1.62
HLA-C-204ENST00000415537 TARDBPQ13148 414 aaKnown RBP eCLIP25.2■■□□□ 1.62
HLA-C-204ENST00000415537 CCDC122Q5T0U0 273 aa25.2■■□□□ 1.62
HLA-C-204ENST00000415537 TMCO3Q6UWJ1 677 aa25.2■■□□□ 1.62
HLA-C-204ENST00000415537 POLNQ7Z5Q5 900 aa25.2■■□□□ 1.62
HLA-C-204ENST00000415537 ZNF548Q8NEK5 533 aaPredicted RBP25.2■■□□□ 1.62
HLA-C-204ENST00000415537 BTBD6Q96KE9 485 aa25.2■■□□□ 1.62
HLA-C-204ENST00000415537 APOLD1Q96LR9 279 aa25.2■■□□□ 1.62
HLA-C-204ENST00000415537 COQ6Q9Y2Z9 468 aa25.2■■□□□ 1.62
HLA-C-204ENST00000415537 CSNK1G3Q9Y6M4 447 aa25.2■■□□□ 1.62
HLA-C-204ENST00000415537 DMXL2Q8TDJ6 3036 aa25.2■■□□□ 1.62
HLA-C-204ENST00000415537 CFAP47Q6ZTR5 3102 aa25.19■■□□□ 1.62
HLA-C-204ENST00000415537 K7ESM1 405 aa25.19■■□□□ 1.62
HLA-C-204ENST00000415537 MYO1FO00160 1098 aa25.19■■□□□ 1.62
HLA-C-204ENST00000415537 RIOK3O14730 519 aaKnown RBP25.19■■□□□ 1.62
HLA-C-204ENST00000415537 AQP9O43315 295 aa25.19■■□□□ 1.62
HLA-C-204ENST00000415537 GYPCP04921 128 aa25.19■■□□□ 1.62
HLA-C-204ENST00000415537 RARAP10276 462 aa25.19■■□□□ 1.62
HLA-C-204ENST00000415537 TCF4P15884 667 aa25.19■■□□□ 1.62
HLA-C-204ENST00000415537 AMPD1P23109 780 aa25.19■■□□□ 1.62
HLA-C-204ENST00000415537 SCNN1BP51168 640 aa25.19■■□□□ 1.62
HLA-C-204ENST00000415537 LRRC14Q15048 493 aa25.19■■□□□ 1.62
HLA-C-204ENST00000415537 SKOR2Q2VWA4 1001 aaPredicted RBP25.19■■□□□ 1.62
HLA-C-204ENST00000415537 TPRG1LQ5T0D9 272 aa25.19■■□□□ 1.62
HLA-C-204ENST00000415537 KDM7AQ6ZMT4 941 aa25.19■■□□□ 1.62
HLA-C-204ENST00000415537 NIPA2Q8N8Q9 360 aa25.19■■□□□ 1.62
HLA-C-204ENST00000415537 TP53I13Q8NBR0 393 aaPredicted RBP25.19■■□□□ 1.62
HLA-C-204ENST00000415537 LMX1AQ8TE12 382 aa25.19■■□□□ 1.62
HLA-C-204ENST00000415537 TEKT4Q8WW24 435 aa25.19■■□□□ 1.62
HLA-C-204ENST00000415537 ZNF599Q96NL3 588 aa25.19■■□□□ 1.62
HLA-C-204ENST00000415537 MBNL1Q9NR56 388 aaKnown RBP25.19■■□□□ 1.62
HLA-C-204ENST00000415537 SPASTQ9UBP0 616 aa25.19■■□□□ 1.62
HLA-C-204ENST00000415537 SEPT3Q9UH03 358 aa25.19■■□□□ 1.62
HLA-C-204ENST00000415537 KLF15Q9UIH9 416 aa25.19■■□□□ 1.62
HLA-C-204ENST00000415537 ATP8A1Q9Y2Q0 1164 aa25.19■■□□□ 1.62
HLA-C-204ENST00000415537 FREM2Q5SZK8 3169 aa25.18■■□□□ 1.62
HLA-C-204ENST00000415537 LZTS3O60299 673 aaPredicted RBP25.18■■□□□ 1.62
HLA-C-204ENST00000415537 CYP1A2P05177 515 aa25.18■■□□□ 1.62
HLA-C-204ENST00000415537 C6P13671 934 aa25.18■■□□□ 1.62
HLA-C-204ENST00000415537 CASP14P31944 242 aa25.18■■□□□ 1.62
HLA-C-204ENST00000415537 EIF4A3P38919 411 aaKnown RBP25.18■■□□□ 1.62
HLA-C-204ENST00000415537 SSR1P43307 286 aaKnown RBP25.18■■□□□ 1.62
HLA-C-204ENST00000415537 POLR2LP62875 67 aaKnown RBP25.18■■□□□ 1.62
HLA-C-204ENST00000415537 EIF2B5Q13144 721 aaKnown RBP25.18■■□□□ 1.62
HLA-C-204ENST00000415537 LBRQ14739 615 aaKnown RBP25.18■■□□□ 1.62
HLA-C-204ENST00000415537 TMCO4Q5TGY1 634 aa25.18■■□□□ 1.62
HLA-C-204ENST00000415537 FAM181AQ8N9Y4 354 aa25.18■■□□□ 1.62
HLA-C-204ENST00000415537 NXPE2Q96DL1 559 aa25.18■■□□□ 1.62
HLA-C-204ENST00000415537 CSPG4P5Q96PW8 444 aa25.18■■□□□ 1.62
HLA-C-204ENST00000415537 USP29Q9HBJ7 922 aa25.18■■□□□ 1.62
HLA-C-204ENST00000415537 APOBEC3BQ9UH17 382 aaKnown RBP25.18■■□□□ 1.62
HLA-C-204ENST00000415537 CLCA2Q9UQC9 943 aa25.18■■□□□ 1.62
HLA-C-204ENST00000415537 ZFHX4Q86UP3 3567 aa25.18■■□□□ 1.62
HLA-C-204ENST00000415537 SHROOM3Q8TF72 1996 aa25.17■■□□□ 1.62
HLA-C-204ENST00000415537 SERPINB6P35237 376 aa25.17■■□□□ 1.62
HLA-C-204ENST00000415537 LIG3P49916 1009 aa25.17■■□□□ 1.62
HLA-C-204ENST00000415537 INSM1Q01101 510 aaPredicted RBP25.17■■□□□ 1.62
HLA-C-204ENST00000415537 KRT81Q14533 505 aa25.17■■□□□ 1.62
HLA-C-204ENST00000415537 ZNF235Q14590 738 aa25.17■■□□□ 1.62
HLA-C-204ENST00000415537 IRF4Q15306 451 aa25.17■■□□□ 1.62
HLA-C-204ENST00000415537 FAXCQ5TGI0 409 aa25.17■■□□□ 1.62
HLA-C-204ENST00000415537 ZCCHC8Q6NZY4 707 aaKnown RBP25.17■■□□□ 1.62
HLA-C-204ENST00000415537 MACC1Q6ZN28 852 aa25.17■■□□□ 1.62
HLA-C-204ENST00000415537 TP53INP2Q8IXH6 220 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms