RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 OSR1Q8TAX0 266 aaPredicted RBP4.78□□□□□ -1.64
PTPRK-209ENST00000415046 AFAP1L1Q8TED9 768 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 ATP8B4Q8TF62 1192 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 DNAJB3Q8WWF6 145 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 ZNF668Q96K58 619 aaPredicted RBP4.78□□□□□ -1.64
PTPRK-209ENST00000415046 LRGUKQ96M69 825 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 MTMR9Q96QG7 549 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 CTAGE1Q96RT6 745 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 PPP1R9BQ96SB3 815 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 PLIN2Q99541 437 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 EIF2AK1Q9BQI3 630 aaKnown RBP4.78□□□□□ -1.64
PTPRK-209ENST00000415046 B3GNT5Q9BYG0 378 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 SEZ6LQ9BYH1 1024 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 CDH19Q9H159 772 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 SNX15Q9NRS6 342 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 NRBP2Q9NSY0 501 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 GAR1Q9NY12 217 aaKnown RBP4.78□□□□□ -1.64
PTPRK-209ENST00000415046 ZIM2Q9NZV7 527 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 WRAP73Q9P2S5 460 aaPredicted RBP4.78□□□□□ -1.64
PTPRK-209ENST00000415046 LRWD1Q9UFC0 647 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 GINS2Q9Y248 185 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 CLIC4Q9Y696 253 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 COL1A2P08123 1366 aa4.78□□□□□ -1.64
PTPRK-209ENST00000415046 NRCAMQ92823 1304 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 MBD3L4A6NDZ8 208 aaPredicted RBP4.77□□□□□ -1.65
PTPRK-209ENST00000415046 MBD3L3A6NE82 208 aaPredicted RBP4.77□□□□□ -1.65
PTPRK-209ENST00000415046 MYMKA6NI61 221 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 RRN3P2A6NIE6 340 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 RSPH10B2B2RC85 870 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 CD3EAPO15446 510 aaKnown RBP4.77□□□□□ -1.65
PTPRK-209ENST00000415046 CCP110O43303 1012 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 MED24O75448 989 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 RFPL1O75677 317 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 RNF8O76064 485 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 C22orf31O95567 290 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 VTNP04004 478 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 RSPH10BP0C881 870 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 MARCKSP29966 332 aaPredicted RBP4.77□□□□□ -1.65
PTPRK-209ENST00000415046 CDC25AP30304 524 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 UQCRC1P31930 480 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 THBS4P35443 961 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 SLC26A2P50443 739 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 TIRAPP58753 221 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 PSMC5P62195 406 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 MRPS6P82932 125 aaKnown RBP4.77□□□□□ -1.65
PTPRK-209ENST00000415046 SRSF1Q07955 248 aaKnown RBP eCLIP4.77□□□□□ -1.65
PTPRK-209ENST00000415046 ORC2Q13416 577 aaPredicted RBP4.77□□□□□ -1.65
PTPRK-209ENST00000415046 PPIGQ13427 754 aaKnown RBP eCLIP4.77□□□□□ -1.65
PTPRK-209ENST00000415046 STK38Q15208 465 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 RBMS2Q15434 407 aaKnown RBP4.77□□□□□ -1.65
PTPRK-209ENST00000415046 IL17AQ16552 155 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 INSCQ1MX18 579 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 TRIM71Q2Q1W2 868 aaKnown RBP4.77□□□□□ -1.65
PTPRK-209ENST00000415046 MAP9Q49MG5 647 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 XKR3Q5GH77 459 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 C9orf50Q5SZB4 431 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 MARCH8Q5T0T0 291 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 DENND2CQ68D51 928 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 ZDHHC24Q6UX98 284 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 NPNTQ6UXI9 565 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 ANO5Q75V66 913 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 MAEAQ7L5Y9 396 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 IRF2BP2Q7Z5L9 587 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 C14orf80Q86SX3 495 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 SAMD14Q8IZD0 417 aaPredicted RBP4.77□□□□□ -1.65
PTPRK-209ENST00000415046 TMEM199Q8N511 208 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 C4orf32Q8N8J7 132 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 RASSF8Q8NHQ8 419 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 ERMNQ8TAM6 284 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 SPSB4Q96A44 273 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 WDYHV1Q96HA8 205 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 VCPIP1Q96JH7 1222 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 ZNF396Q96N95 335 aaPredicted RBP4.77□□□□□ -1.65
PTPRK-209ENST00000415046 SCLT1Q96NL6 688 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 USP28Q96RU2 1077 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 TRIM36Q9NQ86 728 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 CHD7Q9P2D1 2997 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 LPAR3Q9UBY5 353 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 USP22Q9UPT9 525 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 BDP1A6H8Y1 2624 aa4.77□□□□□ -1.65
PTPRK-209ENST00000415046 LOC102723971A0A1B0GUV8 181 aa4.76□□□□□ -1.65
PTPRK-209ENST00000415046 E9PMD0 336 aa4.76□□□□□ -1.65
PTPRK-209ENST00000415046 H3BNC9 293 aa4.76□□□□□ -1.65
PTPRK-209ENST00000415046 M0QZ92 97 aa4.76□□□□□ -1.65
PTPRK-209ENST00000415046 LAD1O00515 517 aa4.76□□□□□ -1.65
PTPRK-209ENST00000415046 SPRY2O43597 315 aa4.76□□□□□ -1.65
PTPRK-209ENST00000415046 TMPRSS11DO60235 418 aa4.76□□□□□ -1.65
PTPRK-209ENST00000415046 USO1O60763 962 aaKnown RBP4.76□□□□□ -1.65
PTPRK-209ENST00000415046 DKC1O60832 514 aaKnown RBP eCLIP4.76□□□□□ -1.65
PTPRK-209ENST00000415046 SLITRK3O94933 977 aa4.76□□□□□ -1.65
PTPRK-209ENST00000415046 STBD1O95210 358 aa4.76□□□□□ -1.65
PTPRK-209ENST00000415046 IQCF3P0C7M6 154 aa4.76□□□□□ -1.65
PTPRK-209ENST00000415046 TMEM191BP0C7N4 346 aa4.76□□□□□ -1.65
PTPRK-209ENST00000415046 GHRP10912 638 aa4.76□□□□□ -1.65
PTPRK-209ENST00000415046 PRF1P14222 555 aa4.76□□□□□ -1.65
PTPRK-209ENST00000415046 HOXD9P28356 352 aaPredicted RBP4.76□□□□□ -1.65
PTPRK-209ENST00000415046 SLC7A1P30825 629 aa4.76□□□□□ -1.65
PTPRK-209ENST00000415046 HOXC8P31273 242 aa4.76□□□□□ -1.65
PTPRK-209ENST00000415046 YWHABP31946 246 aaKnown RBP4.76□□□□□ -1.65
PTPRK-209ENST00000415046 GNALP38405 381 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms