RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 GFPT2O94808 682 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 CD4P01730 458 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 HOXC6P09630 235 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 ARSBP15848 533 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 CHN1P15882 459 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 KLRC2P26717 231 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 ROR2Q01974 943 aaKnown RBP3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 BLMHQ13867 455 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 PPP2R5BQ15173 497 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 ZKSCAN8Q15776 578 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 ODF3L2Q3SX64 289 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 KLHL22Q53GT1 634 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 CCDC158Q5M9N0 1113 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 DGAT2L7PQ6IED9 249 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 KIAA1161Q6NSJ0 714 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 KIAA1324Q6UXG2 1013 aaKnown RBP3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 FAM217AQ8IXS0 508 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 CACNA2D3Q8IZS8 1091 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 TMEM57Q8N5G2 664 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 TMEM217Q8N7C4 229 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 C7orf57Q8NEG2 295 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 OR6Y1Q8NGX8 325 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 GABPB2Q8TAK5 448 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 BICD2Q8TD16 824 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 ARRDC3Q96B67 414 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 SDCCAG3Q96C92 435 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 PPM1MQ96MI6 270 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 SPAG5Q96R06 1193 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 WDR77Q9BQA1 342 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 HDHD5Q9BXW7 423 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 FRMD8Q9BZ67 464 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 TRIM31Q9BZY9 425 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 ARHGAP39Q9C0H5 1083 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 TSPYL1Q9H0U9 437 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 ABCG4Q9H172 646 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 MYLK2Q9H1R3 596 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 MAGEH1Q9H213 219 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 PLAC1Q9HBJ0 212 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 RASSF1Q9NS23 344 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 ANKEF1Q9NU02 776 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 TMEM248Q9NWD8 314 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 DCAF16Q9NXF7 216 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 ZDHHC7Q9NXF8 308 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 OGFRQ9NZT2 677 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 LRFN1Q9P244 771 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 TBK1Q9UHD2 729 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 XPO7Q9UIA9 1087 aaKnown RBP3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 CPSF1Q10570 1443 aaKnown RBP3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 FAM135BQ49AJ0 1406 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 SPAG9O60271 1321 aaKnown RBP3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 RTL1A6NKG5 1358 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 EFCAB6Q5THR3 1501 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 ZFYVE16Q7Z3T8 1539 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 TCRBV7S3A2A0A539 114 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 FAM170AA1A519 330 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 FAM90A20PA6NIJ5 464 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 F5H423 210 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 IPO5O00410 1097 aaKnown RBP3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 ADGRB1O14514 1584 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 PYGLP06737 847 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 IFIT1P09914 478 aaKnown RBP3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 GSTM2P28161 218 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 HOXD3P31249 432 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 TNFSF8P32971 234 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 CYP2J2P51589 502 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 KRT83P78385 493 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 MPP1Q00013 466 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 MAP2K1Q02750 393 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 MST1RQ04912 1400 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 PPP2R5CQ13362 524 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 C5orf22Q49AR2 442 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 CCDC38Q502W7 563 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 ARL13AQ5H913 290 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 FRMPD1Q5SYB0 1578 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 CCDC183Q5T5S1 534 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 SULT6B1Q6IMI4 303 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 AADACL2Q6P093 401 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 UNC5DQ6UXZ4 953 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 MCM10Q7L590 875 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 ADHFE1Q8IWW8 467 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 LSMEM1Q8N8F7 131 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 ARL10Q8N8L6 244 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 ENGASEQ8NFI3 743 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 ADAMTS15Q8TE58 950 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 OIT3Q8WWZ8 545 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 ANKRD7Q92527 254 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 C3orf49Q96BT1 292 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 VMP1Q96GC9 406 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 ZNF333Q96JL9 665 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 ZMAT2Q96NC0 199 aaKnown RBP3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 B3GNT4Q9C0J1 378 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 HIPK3Q9H422 1215 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 ACTR5Q9H9F9 607 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 Q9N2J8 555 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 WWOXQ9NZC7 414 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 SELENONQ9NZV5 590 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 CGNQ9P2M7 1197 aaKnown RBP3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 WNT16Q9UBV4 365 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 SLC25A13Q9UJS0 675 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms