RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 F9P00740 461 aa13.77□□□□□ -0.21
RAPGEF1-204ENST00000414781 PDGFRAP16234 1089 aa13.77□□□□□ -0.21
RAPGEF1-204ENST00000414781 GPD1P21695 349 aa13.77□□□□□ -0.21
RAPGEF1-204ENST00000414781 CD82P27701 267 aa13.77□□□□□ -0.21
RAPGEF1-204ENST00000414781 AKT2P31751 481 aa13.77□□□□□ -0.21
RAPGEF1-204ENST00000414781 ZNF143P52747 638 aaPredicted RBP13.77□□□□□ -0.21
RAPGEF1-204ENST00000414781 OXCT1P55809 520 aa13.77□□□□□ -0.21
RAPGEF1-204ENST00000414781 CYP4F2P78329 520 aa13.77□□□□□ -0.21
RAPGEF1-204ENST00000414781 FAM46CQ5VWP2 391 aa13.77□□□□□ -0.21
RAPGEF1-204ENST00000414781 RNF219Q5W0B1 726 aaPredicted RBP13.77□□□□□ -0.21
RAPGEF1-204ENST00000414781 VASH2Q86V25 355 aa13.77□□□□□ -0.21
RAPGEF1-204ENST00000414781 TICAM1Q8IUC6 712 aa13.77□□□□□ -0.21
RAPGEF1-204ENST00000414781 CCDC117Q8IWD4 279 aaPredicted RBP13.77□□□□□ -0.21
RAPGEF1-204ENST00000414781 STK40Q8N2I9 435 aa13.77□□□□□ -0.21
RAPGEF1-204ENST00000414781 FIBINQ8TAL6 211 aa13.77□□□□□ -0.21
RAPGEF1-204ENST00000414781 WFDC5Q8TCV5 224 aa13.77□□□□□ -0.21
RAPGEF1-204ENST00000414781 CNPY3Q9BT09 278 aa13.77□□□□□ -0.21
RAPGEF1-204ENST00000414781 EPB41L5Q9HCM4 733 aa13.77□□□□□ -0.21
RAPGEF1-204ENST00000414781 TFR2Q9UP52 801 aa13.77□□□□□ -0.21
RAPGEF1-204ENST00000414781 ERVW-1Q9UQF0 538 aa13.77□□□□□ -0.21
RAPGEF1-204ENST00000414781 COL27A1Q8IZC6 1860 aaPredicted RBP13.76□□□□□ -0.21
RAPGEF1-204ENST00000414781 TYW5A2RUC4 315 aaKnown RBP13.76□□□□□ -0.21
RAPGEF1-204ENST00000414781 C2CD4BA6NLJ0 364 aa13.76□□□□□ -0.21
RAPGEF1-204ENST00000414781 TTC34A8MYJ7 566 aa13.76□□□□□ -0.21
RAPGEF1-204ENST00000414781 BUB1O43683 1085 aa13.76□□□□□ -0.21
RAPGEF1-204ENST00000414781 TBL1XO60907 577 aa13.76□□□□□ -0.21
RAPGEF1-204ENST00000414781 DAB1O75553 588 aa13.76□□□□□ -0.21
RAPGEF1-204ENST00000414781 MOCS3O95396 460 aa13.76□□□□□ -0.21
RAPGEF1-204ENST00000414781 JMJD7P0C870 316 aa13.76□□□□□ -0.21
RAPGEF1-204ENST00000414781 NME1P15531 152 aaKnown RBP13.76□□□□□ -0.21
RAPGEF1-204ENST00000414781 POU3F2P20265 443 aaPredicted RBP13.76□□□□□ -0.21
RAPGEF1-204ENST00000414781 PSMA2P25787 234 aa13.76□□□□□ -0.21
RAPGEF1-204ENST00000414781 TNFRSF8P28908 595 aa13.76□□□□□ -0.21
RAPGEF1-204ENST00000414781 MAN1A1P33908 653 aa13.76□□□□□ -0.21
RAPGEF1-204ENST00000414781 PTPN9P43378 593 aa13.76□□□□□ -0.21
RAPGEF1-204ENST00000414781 RPL7AP62424 266 aaKnown RBP13.76□□□□□ -0.21
RAPGEF1-204ENST00000414781 SLC25A52Q3SY17 297 aa13.76□□□□□ -0.21
RAPGEF1-204ENST00000414781 DCAF6Q58WW2 860 aa13.76□□□□□ -0.21
RAPGEF1-204ENST00000414781 FHL5Q5TD97 284 aa13.76□□□□□ -0.21
RAPGEF1-204ENST00000414781 C11orf63Q6NUN7 778 aa13.76□□□□□ -0.21
RAPGEF1-204ENST00000414781 NEK5Q6P3R8 708 aa13.76□□□□□ -0.21
RAPGEF1-204ENST00000414781 CRTC1Q6UUV9 634 aa13.76□□□□□ -0.21
RAPGEF1-204ENST00000414781 DAAM2Q86T65 1068 aa13.76□□□□□ -0.21
RAPGEF1-204ENST00000414781 DEFB106AQ8N104 65 aa13.76□□□□□ -0.21
RAPGEF1-204ENST00000414781 OR13H1Q8NG92 308 aa13.76□□□□□ -0.21
RAPGEF1-204ENST00000414781 C9orf43Q8TAL5 461 aaPredicted RBP13.76□□□□□ -0.21
RAPGEF1-204ENST00000414781 CLEC4CQ8WTT0 213 aa13.76□□□□□ -0.21
RAPGEF1-204ENST00000414781 SSC4DQ8WTU2 575 aa13.76□□□□□ -0.21
RAPGEF1-204ENST00000414781 RXFP2Q8WXD0 754 aa13.76□□□□□ -0.21
RAPGEF1-204ENST00000414781 LMLNQ96KR4 655 aa13.76□□□□□ -0.21
RAPGEF1-204ENST00000414781 SLC2A13Q96QE2 648 aa13.76□□□□□ -0.21
RAPGEF1-204ENST00000414781 ESPNB1AK53 854 aa13.75□□□□□ -0.21
RAPGEF1-204ENST00000414781 NTN3O00634 580 aaPredicted RBP13.75□□□□□ -0.21
RAPGEF1-204ENST00000414781 MUSKO15146 869 aa13.75□□□□□ -0.21
RAPGEF1-204ENST00000414781 GRAP2O75791 330 aa13.75□□□□□ -0.21
RAPGEF1-204ENST00000414781 PROSCO94903 275 aa13.75□□□□□ -0.21
RAPGEF1-204ENST00000414781 CSF2P04141 144 aa13.75□□□□□ -0.21
RAPGEF1-204ENST00000414781 HNRNPA2B1P22626 353 aaKnown RBP13.75□□□□□ -0.21
RAPGEF1-204ENST00000414781 NNMTP40261 264 aa13.75□□□□□ -0.21
RAPGEF1-204ENST00000414781 MESDQ14696 234 aa13.75□□□□□ -0.21
RAPGEF1-204ENST00000414781 TAF5Q15542 800 aa13.75□□□□□ -0.21
RAPGEF1-204ENST00000414781 PERM1Q5SV97 790 aa13.75□□□□□ -0.21
RAPGEF1-204ENST00000414781 PIK3R6Q5UE93 754 aa13.75□□□□□ -0.21
RAPGEF1-204ENST00000414781 AGBL4Q5VU57 503 aa13.75□□□□□ -0.21
RAPGEF1-204ENST00000414781 STRADAQ7RTN6 431 aa13.75□□□□□ -0.21
RAPGEF1-204ENST00000414781 ABI3BPQ7Z7G0 1075 aa13.75□□□□□ -0.21
RAPGEF1-204ENST00000414781 NIPA2Q8N8Q9 360 aa13.75□□□□□ -0.21
RAPGEF1-204ENST00000414781 HJURPQ8NCD3 748 aaPredicted RBP13.75□□□□□ -0.21
RAPGEF1-204ENST00000414781 NDRG1Q92597 394 aaKnown RBP13.75□□□□□ -0.21
RAPGEF1-204ENST00000414781 TMEM159Q96B96 161 aa13.75□□□□□ -0.21
RAPGEF1-204ENST00000414781 IL12RB2Q99665 862 aa13.75□□□□□ -0.21
RAPGEF1-204ENST00000414781 CCDC3Q9BQI4 270 aa13.75□□□□□ -0.21
RAPGEF1-204ENST00000414781 SYNDIG1Q9H7V2 258 aa13.75□□□□□ -0.21
RAPGEF1-204ENST00000414781 TRIM10Q9UDY6 481 aa13.75□□□□□ -0.21
RAPGEF1-204ENST00000414781 USP27XA6NNY8 438 aa13.74□□□□□ -0.21
RAPGEF1-204ENST00000414781 A6NNZ2 444 aa13.74□□□□□ -0.21
RAPGEF1-204ENST00000414781 C1QTNF3-AMACRE9PGA6 284 aa13.74□□□□□ -0.21
RAPGEF1-204ENST00000414781 SLC31A1O15431 190 aa13.74□□□□□ -0.21
RAPGEF1-204ENST00000414781 AQP9O43315 295 aa13.74□□□□□ -0.21
RAPGEF1-204ENST00000414781 BUB1BO60566 1050 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF1-204ENST00000414781 PALMO75781 387 aa13.74□□□□□ -0.21
RAPGEF1-204ENST00000414781 WT1P19544 449 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF1-204ENST00000414781 CCKBRP32239 447 aa13.74□□□□□ -0.21
RAPGEF1-204ENST00000414781 PCK1P35558 622 aa13.74□□□□□ -0.21
RAPGEF1-204ENST00000414781 FLT3P36888 993 aa13.74□□□□□ -0.21
RAPGEF1-204ENST00000414781 SLC11A2P49281 568 aa13.74□□□□□ -0.21
RAPGEF1-204ENST00000414781 SGSHP51688 502 aa13.74□□□□□ -0.21
RAPGEF1-204ENST00000414781 GNG11P61952 73 aa13.74□□□□□ -0.21
RAPGEF1-204ENST00000414781 ECT2LQ008S8 904 aa13.74□□□□□ -0.21
RAPGEF1-204ENST00000414781 MTA1Q13330 715 aa13.74□□□□□ -0.21
RAPGEF1-204ENST00000414781 CDH18Q13634 790 aa13.74□□□□□ -0.21
RAPGEF1-204ENST00000414781 HADHQ16836 314 aaKnown RBP13.74□□□□□ -0.21
RAPGEF1-204ENST00000414781 PITRM1Q5JRX3 1037 aa13.74□□□□□ -0.21
RAPGEF1-204ENST00000414781 ZNF569Q5MCW4 686 aa13.74□□□□□ -0.21
RAPGEF1-204ENST00000414781 BHLHA9Q7RTU4 235 aa13.74□□□□□ -0.21
RAPGEF1-204ENST00000414781 PEX26Q7Z412 305 aa13.74□□□□□ -0.21
RAPGEF1-204ENST00000414781 SLFN11Q7Z7L1 901 aa13.74□□□□□ -0.21
RAPGEF1-204ENST00000414781 PARGQ86W56 976 aa13.74□□□□□ -0.21
RAPGEF1-204ENST00000414781 DTX1Q86Y01 620 aa13.74□□□□□ -0.21
RAPGEF1-204ENST00000414781 SLC22A18ASQ8N1D0 253 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms