RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 TXLNGYQ9BZA5 131 aa15.68■□□□□ 0.1
SHMT2-202ENST00000414700 FAM129AQ9BZQ8 928 aa15.68■□□□□ 0.1
SHMT2-202ENST00000414700 MTG2Q9H4K7 406 aa15.68■□□□□ 0.1
SHMT2-202ENST00000414700 ELOVL2Q9NXB9 296 aa15.68■□□□□ 0.1
SHMT2-202ENST00000414700 SLC25A13Q9UJS0 675 aa15.68■□□□□ 0.1
SHMT2-202ENST00000414700 AAR2Q9Y312 384 aaKnown RBP15.68■□□□□ 0.1
SHMT2-202ENST00000414700 MUC22E2RYF6 1773 aaPredicted RBP15.68■□□□□ 0.1
SHMT2-202ENST00000414700 SKAP2O75563 359 aaPredicted RBP15.68■□□□□ 0.1
SHMT2-202ENST00000414700 ANXA9O76027 345 aa15.68■□□□□ 0.1
SHMT2-202ENST00000414700 DLDP09622 509 aaKnown RBP15.68■□□□□ 0.1
SHMT2-202ENST00000414700 WNT3AP56704 352 aa15.68■□□□□ 0.1
SHMT2-202ENST00000414700 GEMIN4P57678 1058 aaKnown RBP15.68■□□□□ 0.1
SHMT2-202ENST00000414700 CRADDP78560 199 aa15.68■□□□□ 0.1
SHMT2-202ENST00000414700 PRPSAP1Q14558 356 aa15.68■□□□□ 0.1
SHMT2-202ENST00000414700 ITIH4Q14624 930 aa15.68■□□□□ 0.1
SHMT2-202ENST00000414700 DLG2Q15700 870 aa15.68■□□□□ 0.1
SHMT2-202ENST00000414700 AP1ARQ63HQ0 302 aa15.68■□□□□ 0.1
SHMT2-202ENST00000414700 MPP5Q8N3R9 675 aa15.68■□□□□ 0.1
SHMT2-202ENST00000414700 ANKS4BQ8N8V4 417 aa15.68■□□□□ 0.1
SHMT2-202ENST00000414700 MCUQ8NE86 351 aa15.68■□□□□ 0.1
SHMT2-202ENST00000414700 CSGALNACT1Q8TDX6 532 aa15.68■□□□□ 0.1
SHMT2-202ENST00000414700 VOPP1Q96AW1 172 aa15.68■□□□□ 0.1
SHMT2-202ENST00000414700 TRIM56Q9BRZ2 755 aaKnown RBP15.68■□□□□ 0.1
SHMT2-202ENST00000414700 FICDQ9BVA6 458 aa15.68■□□□□ 0.1
SHMT2-202ENST00000414700 SEMA4AQ9H3S1 761 aa15.68■□□□□ 0.1
SHMT2-202ENST00000414700 HCN2Q9UL51 889 aa15.68■□□□□ 0.1
SHMT2-202ENST00000414700 NOVA2Q9UNW9 492 aaKnown RBP15.68■□□□□ 0.1
SHMT2-202ENST00000414700 TBC1D3BA6NDS4 549 aa15.67■□□□□ 0.1
SHMT2-202ENST00000414700 TTC34A8MYJ7 566 aa15.67■□□□□ 0.1
SHMT2-202ENST00000414700 SUN1O94901 812 aa15.67■□□□□ 0.1
SHMT2-202ENST00000414700 KAT7O95251 611 aa15.67■□□□□ 0.1
SHMT2-202ENST00000414700 ADRA1AP35348 466 aa15.67■□□□□ 0.1
SHMT2-202ENST00000414700 MAGEA3P43357 314 aa15.67■□□□□ 0.1
SHMT2-202ENST00000414700 SULT2A1Q06520 285 aa15.67■□□□□ 0.1
SHMT2-202ENST00000414700 PDIA2Q13087 525 aaKnown RBP15.67■□□□□ 0.1
SHMT2-202ENST00000414700 BBS9Q3SYG4 887 aa15.67■□□□□ 0.1
SHMT2-202ENST00000414700 C22orf39Q6P5X5 142 aa15.67■□□□□ 0.1
SHMT2-202ENST00000414700 Q6ZVU0 165 aa15.67■□□□□ 0.1
SHMT2-202ENST00000414700 ANKMY2Q8IV38 441 aa15.67■□□□□ 0.1
SHMT2-202ENST00000414700 IGDCC3Q8IVU1 814 aa15.67■□□□□ 0.1
SHMT2-202ENST00000414700 EZH1Q92800 747 aaPredicted RBP15.67■□□□□ 0.1
SHMT2-202ENST00000414700 C9orf72Q96LT7 481 aa15.67■□□□□ 0.1
SHMT2-202ENST00000414700 SAYSD1Q9NPB0 183 aa15.67■□□□□ 0.1
SHMT2-202ENST00000414700 SCUBE2Q9NQ36 999 aa15.67■□□□□ 0.1
SHMT2-202ENST00000414700 NOP53Q9NZM5 478 aaKnown RBP15.67■□□□□ 0.1
SHMT2-202ENST00000414700 PCDHGC4Q9Y5F7 938 aa15.67■□□□□ 0.1
SHMT2-202ENST00000414700 ANKRD33BA6NCL7 494 aa15.67■□□□□ 0.1
SHMT2-202ENST00000414700 LIN7AO14910 233 aaPredicted RBP15.67■□□□□ 0.1
SHMT2-202ENST00000414700 PPFIA2O75334 1257 aa15.67■□□□□ 0.1
SHMT2-202ENST00000414700 ANP32DO95626 131 aa15.67■□□□□ 0.1
SHMT2-202ENST00000414700 GALK1P51570 392 aa15.67■□□□□ 0.1
SHMT2-202ENST00000414700 GEMP55040 296 aa15.67■□□□□ 0.1
SHMT2-202ENST00000414700 MAGOHP61326 146 aaKnown RBP15.67■□□□□ 0.1
SHMT2-202ENST00000414700 CDK16Q00536 496 aa15.67■□□□□ 0.1
SHMT2-202ENST00000414700 NSUN2Q08J23 767 aaKnown RBP eCLIP15.67■□□□□ 0.1
SHMT2-202ENST00000414700 MPP3Q13368 585 aa15.67■□□□□ 0.1
SHMT2-202ENST00000414700 DENND2CQ68D51 928 aa15.67■□□□□ 0.1
SHMT2-202ENST00000414700 DENND5AQ6IQ26 1287 aa15.67■□□□□ 0.1
SHMT2-202ENST00000414700 ZBED8Q8IZ13 594 aa15.67■□□□□ 0.1
SHMT2-202ENST00000414700 PDIK1LQ8N165 341 aa15.67■□□□□ 0.1
SHMT2-202ENST00000414700 WFIKKN2Q8TEU8 576 aa15.67■□□□□ 0.1
SHMT2-202ENST00000414700 NUDCD1Q96RS6 583 aa15.67■□□□□ 0.1
SHMT2-202ENST00000414700 FSD1LQ9BXM9 530 aa15.67■□□□□ 0.1
SHMT2-202ENST00000414700 CDC42EP4Q9H3Q1 356 aaKnown RBP15.67■□□□□ 0.1
SHMT2-202ENST00000414700 LRRC40Q9H9A6 602 aa15.67■□□□□ 0.1
SHMT2-202ENST00000414700 EVLQ9UI08 416 aaPredicted RBP15.67■□□□□ 0.1
SHMT2-202ENST00000414700 ERI2A8K979 691 aaKnown RBP15.66■□□□□ 0.1
SHMT2-202ENST00000414700 WASH3PC4AMC7 463 aa15.66■□□□□ 0.1
SHMT2-202ENST00000414700 SPECC1L-ADORA2AF8WAN1 911 aa15.66■□□□□ 0.1
SHMT2-202ENST00000414700 SMAPO00193 183 aa15.66■□□□□ 0.1
SHMT2-202ENST00000414700 ATP5BP06576 529 aaKnown RBP15.66■□□□□ 0.1
SHMT2-202ENST00000414700 SERPINF2P08697 491 aa15.66■□□□□ 0.1
SHMT2-202ENST00000414700 TPH1P17752 444 aa15.66■□□□□ 0.1
SHMT2-202ENST00000414700 CTHP32929 405 aa15.66■□□□□ 0.1
SHMT2-202ENST00000414700 EIF2DP41214 584 aaKnown RBP15.66■□□□□ 0.1
SHMT2-202ENST00000414700 ARL4CP56559 192 aa15.66■□□□□ 0.1
SHMT2-202ENST00000414700 SESN2P58004 480 aaPredicted RBP15.66■□□□□ 0.1
SHMT2-202ENST00000414700 CAPRIN2Q6IMN6 1127 aaKnown RBP15.66■□□□□ 0.1
SHMT2-202ENST00000414700 LRRC8BQ6P9F7 803 aa15.66■□□□□ 0.1
SHMT2-202ENST00000414700 RANBP10Q6VN20 620 aa15.66■□□□□ 0.1
SHMT2-202ENST00000414700 OR2AP1Q8NGE2 309 aa15.66■□□□□ 0.1
SHMT2-202ENST00000414700 FRS2Q8WU20 508 aa15.66■□□□□ 0.1
SHMT2-202ENST00000414700 UBLCP1Q8WVY7 318 aaPredicted RBP15.66■□□□□ 0.1
SHMT2-202ENST00000414700 THOC1Q96FV9 657 aaKnown RBP15.66■□□□□ 0.1
SHMT2-202ENST00000414700 TBL1YQ9BQ87 522 aa15.66■□□□□ 0.1
SHMT2-202ENST00000414700 EPB41L4BQ9H329 900 aa15.66■□□□□ 0.1
SHMT2-202ENST00000414700 VPS45Q9NRW7 570 aa15.66■□□□□ 0.1
SHMT2-202ENST00000414700 PIAS3Q9Y6X2 628 aa15.66■□□□□ 0.1
SHMT2-202ENST00000414700 LOC730098B7Z3J9 87 aa15.65■□□□□ 0.1
SHMT2-202ENST00000414700 E7ESA3 106 aa15.65■□□□□ 0.1
SHMT2-202ENST00000414700 NDC80O14777 642 aa15.65■□□□□ 0.1
SHMT2-202ENST00000414700 SMNDC1O75940 238 aaKnown RBP eCLIP15.65■□□□□ 0.16e-6■□□□□ 8.8
SHMT2-202ENST00000414700 PDHA1P08559 390 aa15.65■□□□□ 0.1
SHMT2-202ENST00000414700 ALADP13716 330 aa15.65■□□□□ 0.1
SHMT2-202ENST00000414700 KYNUQ16719 465 aa15.65■□□□□ 0.1
SHMT2-202ENST00000414700 CERCAMQ5T4B2 595 aa15.65■□□□□ 0.1
SHMT2-202ENST00000414700 NAPEPLDQ6IQ20 393 aa15.65■□□□□ 0.1
SHMT2-202ENST00000414700 NCEH1Q6PIU2 408 aa15.65■□□□□ 0.1
SHMT2-202ENST00000414700 PPP1R21Q6ZMI0 780 aa15.65■□□□□ 0.1
SHMT2-202ENST00000414700 DPY19L3Q6ZPD9 716 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms