RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 CCDC167Q9P0B6 97 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 AFDNP55196 1824 aaKnown RBP17.38■□□□□ 0.37
PHRF1-202ENST00000413872 CCL16O15467 120 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 RECQL5O94762 991 aaPredicted RBP17.38■□□□□ 0.37
PHRF1-202ENST00000413872 KCNH1O95259 989 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 CTPS1P17812 591 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 FLT3P36888 993 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 GALNT3Q14435 633 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 ZCWPW2Q504Y3 356 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 C16orf46Q6P387 395 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 ZCCHC23Q6ZST2 131 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 AADATQ8N5Z0 425 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 ACE2Q9BYF1 805 aaPredicted RBP17.38■□□□□ 0.37
PHRF1-202ENST00000413872 GPR88Q9GZN0 384 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 ZFYVE1Q9HBF4 777 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 KCTD5Q9NXV2 234 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 ARVCFO00192 962 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 COL6A1P12109 1028 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 TRIM60Q495X7 471 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 USP39Q53GS9 565 aaKnown RBP17.38■□□□□ 0.37
PHRF1-202ENST00000413872 TERB1Q8NA31 727 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 CKAP2Q8WWK9 683 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 TBC1D23Q9NUY8 699 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 CORO2BQ9UQ03 480 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 INPP4BO15327 924 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 DCXO43602 365 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 POLD2P49005 469 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 TRIP4Q15650 581 aaPredicted RBP17.38■□□□□ 0.37
PHRF1-202ENST00000413872 DPP10Q8N608 796 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 ZNF398Q8TD17 642 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 PCED1BQ96HM7 432 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 TRMOQ9BU70 441 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 RHOJQ9H4E5 214 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 DMAC2Q9NW81 257 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 IL1RAPL1Q9NZN1 696 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 LIMD1Q9UGP4 676 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 GTF2IRD1Q9UHL9 959 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 VWA7Q9Y334 891 aa17.38■□□□□ 0.37
PHRF1-202ENST00000413872 BCLAF3A2AJT9 711 aaKnown RBP17.37■□□□□ 0.37
PHRF1-202ENST00000413872 RCCD1A6NED2 376 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 PURAQ00577 322 aaKnown RBP17.37■□□□□ 0.37
PHRF1-202ENST00000413872 ARHGAP1Q07960 439 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 POM121L1PQ3SYA9 428 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 GPRIN3Q6ZVF9 776 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 CD101Q93033 1021 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 ZNF232Q9UNY5 417 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 FAM208AQ9UK61 1670 aaKnown RBP17.37■□□□□ 0.37
PHRF1-202ENST00000413872 SERPINB3P29508 390 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 IRX1P78414 480 aaPredicted RBP17.37■□□□□ 0.37
PHRF1-202ENST00000413872 AUHQ13825 339 aaKnown RBP17.37■□□□□ 0.37
PHRF1-202ENST00000413872 GSTA3Q16772 222 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 SLC10A6Q3KNW5 377 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 FAM228AQ86W67 206 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 TCAIMQ8N3R3 496 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 ASZ1Q8WWH4 475 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 ZDHHC4Q9NPG8 344 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 ERVW-1Q9UQF0 538 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 INVSQ9Y283 1065 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 TBC1D3DA0A087WVF3 549 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 TBC1D3IA0A087WXS9 549 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 TBC1D3EA0A087X179 549 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 TBC1D3KA0A087X1G2 549 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 TBC1D3FA6NER0 549 aaPredicted RBP17.37■□□□□ 0.37
PHRF1-202ENST00000413872 TBC1D3LB9A6J9 549 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 PMM2O15305 246 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 PIGRP01833 764 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 TBC1D3HP0C7X1 549 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 C21orf59P57076 290 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 SQLEQ14534 574 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 TBC1D3GQ6DHY5 549 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 TBC1D3CQ6IPX1 549 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 TBC1D3Q8IZP1 549 aaPredicted RBP17.37■□□□□ 0.37
PHRF1-202ENST00000413872 SETD9Q8NE22 299 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 TRPC4APQ8TEL6 797 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 KLHL5Q96PQ7 755 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 SPATA5L1Q9BVQ7 753 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 SRRM3A6NNA2 597 aaPredicted RBP17.37■□□□□ 0.37
PHRF1-202ENST00000413872 PRMT5O14744 637 aaPredicted RBP17.37■□□□□ 0.37
PHRF1-202ENST00000413872 AVILO75366 819 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 RPP40O75818 363 aaKnown RBP17.37■□□□□ 0.37
PHRF1-202ENST00000413872 CFAP52Q8N1V2 620 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 SPACA7Q96KW9 195 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 SLC24A3Q9HC58 644 aa17.37■□□□□ 0.37
PHRF1-202ENST00000413872 SAC3D1A6NKF1 404 aa17.36■□□□□ 0.37
PHRF1-202ENST00000413872 AP1S1P61966 158 aa17.36■□□□□ 0.37
PHRF1-202ENST00000413872 CASP12Q6UXS9 341 aa17.36■□□□□ 0.37
PHRF1-202ENST00000413872 CHST9Q7L1S5 443 aa17.36■□□□□ 0.37
PHRF1-202ENST00000413872 CLYBLQ8N0X4 340 aa17.36■□□□□ 0.37
PHRF1-202ENST00000413872 C11orf49Q9H6J7 331 aa17.36■□□□□ 0.37
PHRF1-202ENST00000413872 ASF1AQ9Y294 204 aa17.36■□□□□ 0.37
PHRF1-202ENST00000413872 RAP2CQ9Y3L5 183 aa17.36■□□□□ 0.37
PHRF1-202ENST00000413872 DUOX1Q9NRD9 1551 aa17.36■□□□□ 0.37
PHRF1-202ENST00000413872 LRCH4O75427 683 aa17.36■□□□□ 0.37
PHRF1-202ENST00000413872 CAPN15O75808 1086 aa17.36■□□□□ 0.37
PHRF1-202ENST00000413872 UBTFL6P0CB48 400 aaPredicted RBP17.36■□□□□ 0.37
PHRF1-202ENST00000413872 ABCG1P45844 678 aa17.36■□□□□ 0.37
PHRF1-202ENST00000413872 NDST2P52849 883 aa17.36■□□□□ 0.37
PHRF1-202ENST00000413872 R3HCC1LQ7Z5L2 792 aaKnown RBP17.36■□□□□ 0.37
PHRF1-202ENST00000413872 RASGEF1CQ8N431 466 aa17.36■□□□□ 0.37
PHRF1-202ENST00000413872 DLG3Q92796 817 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms