RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 GOLGA6L7A0A1B0GV03 622 aa17.34■□□□□ 0.37
PTPRC-206ENST00000413409 A0A1W2PPM1 405 aa17.34■□□□□ 0.37
PTPRC-206ENST00000413409 TCP11X1B4DZS4 312 aa17.34■□□□□ 0.37
PTPRC-206ENST00000413409 AP3B1O00203 1094 aa17.34■□□□□ 0.37
PTPRC-206ENST00000413409 PSMD3O43242 534 aa17.34■□□□□ 0.37
PTPRC-206ENST00000413409 SPAG7O75391 227 aa17.34■□□□□ 0.37
PTPRC-206ENST00000413409 ALDH1A2O94788 518 aa17.34■□□□□ 0.37
PTPRC-206ENST00000413409 MT-ND3P03897 115 aa17.34■□□□□ 0.37
PTPRC-206ENST00000413409 CPB1P15086 417 aa17.34■□□□□ 0.37
PTPRC-206ENST00000413409 KRT4P19013 534 aa17.34■□□□□ 0.37
PTPRC-206ENST00000413409 BCKDHBP21953 392 aa17.34■□□□□ 0.37
PTPRC-206ENST00000413409 CA4P22748 312 aa17.34■□□□□ 0.37
PTPRC-206ENST00000413409 CNTFP26441 200 aa17.34■□□□□ 0.37
PTPRC-206ENST00000413409 SLC18A2Q05940 514 aa17.34■□□□□ 0.37
PTPRC-206ENST00000413409 GRSF1Q12849 480 aaKnown RBP eCLIP17.34■□□□□ 0.37
PTPRC-206ENST00000413409 MTA1Q13330 715 aa17.34■□□□□ 0.37
PTPRC-206ENST00000413409 TEX44Q53QW1 395 aa17.34■□□□□ 0.37
PTPRC-206ENST00000413409 ARTNQ5T4W7 220 aa17.34■□□□□ 0.37
PTPRC-206ENST00000413409 LGSNQ5TDP6 509 aa17.34■□□□□ 0.37
PTPRC-206ENST00000413409 AFMIDQ63HM1 303 aa17.34■□□□□ 0.37
PTPRC-206ENST00000413409 NAIF1Q69YI7 327 aaPredicted RBP17.34■□□□□ 0.37
PTPRC-206ENST00000413409 MARK2Q7KZI7 788 aaKnown RBP17.34■□□□□ 0.37
PTPRC-206ENST00000413409 PID1Q7Z2X4 250 aa17.34■□□□□ 0.37
PTPRC-206ENST00000413409 PRPF39Q86UA1 669 aaKnown RBP17.34■□□□□ 0.37
PTPRC-206ENST00000413409 ARHGAP12Q8IWW6 846 aa17.34■□□□□ 0.37
PTPRC-206ENST00000413409 ANKS4BQ8N8V4 417 aa17.34■□□□□ 0.37
PTPRC-206ENST00000413409 BANPQ8N9N5 519 aa17.34■□□□□ 0.37
PTPRC-206ENST00000413409 GRAMD1AQ96CP6 724 aa17.34■□□□□ 0.37
PTPRC-206ENST00000413409 MRRFQ96E11 262 aaKnown RBP17.34■□□□□ 0.37
PTPRC-206ENST00000413409 APOPT1Q96IL0 206 aa17.34■□□□□ 0.37
PTPRC-206ENST00000413409 FCRL2Q96LA5 508 aaPredicted RBP17.34■□□□□ 0.37
PTPRC-206ENST00000413409 SLC32A1Q9H598 525 aa17.34■□□□□ 0.37
PTPRC-206ENST00000413409 HPS4Q9NQG7 708 aa17.34■□□□□ 0.37
PTPRC-206ENST00000413409 OBP2AQ9NY56 170 aa17.34■□□□□ 0.37
PTPRC-206ENST00000413409 MOCS1Q9NZB8 636 aa17.34■□□□□ 0.37
PTPRC-206ENST00000413409 MAD1L1Q9Y6D9 718 aa17.34■□□□□ 0.37
PTPRC-206ENST00000413409 CFAP46Q8IYW2 2715 aa17.34■□□□□ 0.37
PTPRC-206ENST00000413409 THADAQ6YHU6 1953 aa17.34■□□□□ 0.37
PTPRC-206ENST00000413409 GON4LQ3T8J9 2241 aa17.33■□□□□ 0.36
PTPRC-206ENST00000413409 KCNK1O00180 336 aa17.33■□□□□ 0.36
PTPRC-206ENST00000413409 MSI1O43347 362 aaKnown RBP17.33■□□□□ 0.36
PTPRC-206ENST00000413409 SNRPAP09012 282 aaKnown RBP17.33■□□□□ 0.36
PTPRC-206ENST00000413409 HAPLN1P10915 354 aaPredicted RBP17.33■□□□□ 0.36
PTPRC-206ENST00000413409 CCNCP24863 283 aa17.33■□□□□ 0.36
PTPRC-206ENST00000413409 YWHAQP27348 245 aa17.33■□□□□ 0.36
PTPRC-206ENST00000413409 CCNFP41002 786 aa17.33■□□□□ 0.36
PTPRC-206ENST00000413409 GRIA1P42261 906 aa17.33■□□□□ 0.36
PTPRC-206ENST00000413409 GPR15P49685 360 aa17.33■□□□□ 0.36
PTPRC-206ENST00000413409 PGFP49763 221 aa17.33■□□□□ 0.36
PTPRC-206ENST00000413409 RPL10AP62906 217 aaKnown RBP17.33■□□□□ 0.36
PTPRC-206ENST00000413409 PDK4Q16654 411 aa17.33■□□□□ 0.36
PTPRC-206ENST00000413409 DDR2Q16832 855 aa17.33■□□□□ 0.36
PTPRC-206ENST00000413409 KCTD11Q693B1 232 aa17.33■□□□□ 0.36
PTPRC-206ENST00000413409 RWDD4Q6NW29 188 aaKnown RBP17.33■□□□□ 0.36
PTPRC-206ENST00000413409 CYP2U1Q7Z449 544 aa17.33■□□□□ 0.36
PTPRC-206ENST00000413409 RAB44Q7Z6P3 723 aaPredicted RBP17.33■□□□□ 0.36
PTPRC-206ENST00000413409 MPP5Q8N3R9 675 aa17.33■□□□□ 0.36
PTPRC-206ENST00000413409 ATPAF2Q8N5M1 289 aa17.33■□□□□ 0.36
PTPRC-206ENST00000413409 PPM1NQ8N819 430 aa17.33■□□□□ 0.36
PTPRC-206ENST00000413409 RTL3Q8N8U3 475 aaKnown RBP17.33■□□□□ 0.36
PTPRC-206ENST00000413409 NETO2Q8NC67 525 aa17.33■□□□□ 0.36
PTPRC-206ENST00000413409 GDAP1Q8TB36 358 aa17.33■□□□□ 0.36
PTPRC-206ENST00000413409 BPIFB1Q8TDL5 484 aa17.33■□□□□ 0.36
PTPRC-206ENST00000413409 EZH1Q92800 747 aaPredicted RBP17.33■□□□□ 0.36
PTPRC-206ENST00000413409 FBXO32Q969P5 355 aa17.33■□□□□ 0.36
PTPRC-206ENST00000413409 TTC17Q96AE7 1141 aa17.33■□□□□ 0.36
PTPRC-206ENST00000413409 CABS1Q96KC9 395 aa17.33■□□□□ 0.36
PTPRC-206ENST00000413409 TEKT5Q96M29 485 aa17.33■□□□□ 0.36
PTPRC-206ENST00000413409 GORASP1Q9BQQ3 440 aa17.33■□□□□ 0.36
PTPRC-206ENST00000413409 CASS4Q9NQ75 786 aa17.33■□□□□ 0.36
PTPRC-206ENST00000413409 GKN1Q9NS71 199 aa17.33■□□□□ 0.36
PTPRC-206ENST00000413409 OSER1Q9NX31 292 aa17.33■□□□□ 0.36
PTPRC-206ENST00000413409 DONSONQ9NYP3 566 aa17.33■□□□□ 0.36
PTPRC-206ENST00000413409 SFMBT1Q9UHJ3 866 aa17.33■□□□□ 0.36
PTPRC-206ENST00000413409 CACNG3O60359 315 aa17.32■□□□□ 0.36
PTPRC-206ENST00000413409 SNX3O60493 162 aa17.32■□□□□ 0.36
PTPRC-206ENST00000413409 KRT38O76015 456 aa17.32■□□□□ 0.36
PTPRC-206ENST00000413409 APBB3O95704 486 aa17.32■□□□□ 0.36
PTPRC-206ENST00000413409 TAC1P20366 129 aa17.32■□□□□ 0.36
PTPRC-206ENST00000413409 RPA3P35244 121 aaPredicted RBP17.32■□□□□ 0.36
PTPRC-206ENST00000413409 MAPK8P45983 427 aa17.32■□□□□ 0.36
PTPRC-206ENST00000413409 NEK3P51956 506 aa17.32■□□□□ 0.36
PTPRC-206ENST00000413409 TBX4P57082 545 aa17.32■□□□□ 0.36
PTPRC-206ENST00000413409 USP46P62068 366 aa17.32■□□□□ 0.36
PTPRC-206ENST00000413409 NIPAL4Q0D2K0 466 aa17.32■□□□□ 0.36
PTPRC-206ENST00000413409 ZBTB17Q13105 803 aa17.32■□□□□ 0.36
PTPRC-206ENST00000413409 TRIP4Q15650 581 aaPredicted RBP17.32■□□□□ 0.36
PTPRC-206ENST00000413409 SPANXN3Q5MJ09 141 aa17.32■□□□□ 0.36
PTPRC-206ENST00000413409 HHATQ5VTY9 493 aa17.32■□□□□ 0.36
PTPRC-206ENST00000413409 TIGD7Q6NT04 549 aaPredicted RBP17.32■□□□□ 0.36
PTPRC-206ENST00000413409 CTAGE3PQ8IX95 158 aa17.32■□□□□ 0.36
PTPRC-206ENST00000413409 ATAD1Q8NBU5 361 aa17.32■□□□□ 0.36
PTPRC-206ENST00000413409 PIGKQ92643 395 aa17.32■□□□□ 0.36
PTPRC-206ENST00000413409 FATE1Q969F0 183 aa17.32■□□□□ 0.36
PTPRC-206ENST00000413409 LRIG1Q96JA1 1093 aa17.32■□□□□ 0.36
PTPRC-206ENST00000413409 PGLYRP2Q96PD5 576 aa17.32■□□□□ 0.36
PTPRC-206ENST00000413409 FAM83CQ9BQN1 747 aa17.32■□□□□ 0.36
PTPRC-206ENST00000413409 PLCD4Q9BRC7 762 aa17.32■□□□□ 0.36
PTPRC-206ENST00000413409 CEP41Q9BYV8 373 aa17.32■□□□□ 0.36
PTPRC-206ENST00000413409 SMG9Q9H0W8 520 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms