RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 FUOMA2VDF0 154 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 MTMR11A4FU01 709 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 TRIM64CA6NLI5 447 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 F8W8V4 182 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 H7C4K7 107 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 TPP1O14773 563 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 HGSO14964 777 aaPredicted RBP13.13□□□□□ -0.31
LITAF-203ENST00000413364 TRMUO75648 421 aaKnown RBP13.13□□□□□ -0.31
LITAF-203ENST00000413364 SOAT2O75908 522 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 T-ENOLP0DO92 83 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 ZNF12P17014 697 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 XIAPP98170 497 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 SMARCB1Q12824 385 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 TMEM214Q6NUQ4 689 aaKnown RBP13.13□□□□□ -0.31
LITAF-203ENST00000413364 RFWD2Q8NHY2 731 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 RAB3IL1Q8TBN0 382 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 ZNF419Q96HQ0 510 aaPredicted RBP13.13□□□□□ -0.31
LITAF-203ENST00000413364 MRPL9Q9BYD2 267 aaKnown RBP13.13□□□□□ -0.31
LITAF-203ENST00000413364 OLA1Q9NTK5 396 aaKnown RBP13.13□□□□□ -0.31
LITAF-203ENST00000413364 COMMD8Q9NX08 183 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 PLK2Q9NYY3 685 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 SLC27A5Q9Y2P5 690 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 ADAM23O75077 832 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 VNN2O95498 520 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 GALTP07902 379 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 RHOQP17081 205 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 TPH1P17752 444 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 GRIA2P42262 883 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 CCR3P51677 355 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 APLP1P51693 650 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 EFEMP1Q12805 493 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 E2F2Q14209 437 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 TRIP4Q15650 581 aaPredicted RBP13.13□□□□□ -0.31
LITAF-203ENST00000413364 FAM209AQ5JX71 171 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 RSPO2Q6UXX9 243 aaPredicted RBP13.13□□□□□ -0.31
LITAF-203ENST00000413364 UMODL1-AS1Q8N2C9 162 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 SPATA22Q8NHS9 363 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 MFSD3Q96ES6 412 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 PRPF18Q99633 342 aaKnown RBP13.13□□□□□ -0.31
LITAF-203ENST00000413364 TBL1YQ9BQ87 522 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 MECRQ9BV79 373 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 UNC93B1Q9H1C4 597 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 NOL6Q9H6R4 1146 aaKnown RBP13.13□□□□□ -0.31
LITAF-203ENST00000413364 PRDM5Q9NQX1 630 aaPredicted RBP13.13□□□□□ -0.31
LITAF-203ENST00000413364 TLR8Q9NR97 1041 aaKnown RBP13.13□□□□□ -0.31
LITAF-203ENST00000413364 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.13□□□□□ -0.31
LITAF-203ENST00000413364 PPARGC1AQ9UBK2 798 aaKnown RBP13.13□□□□□ -0.31
LITAF-203ENST00000413364 COQ6Q9Y2Z9 468 aa13.13□□□□□ -0.31
LITAF-203ENST00000413364 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.12□□□□□ -0.31
LITAF-203ENST00000413364 CCDC160A6NGH7 325 aa13.12□□□□□ -0.31
LITAF-203ENST00000413364 GLRA3O75311 464 aa13.12□□□□□ -0.31
LITAF-203ENST00000413364 OR6B1O95007 311 aa13.12□□□□□ -0.31
LITAF-203ENST00000413364 BPGMP07738 259 aa13.12□□□□□ -0.31
LITAF-203ENST00000413364 HAPLN1P10915 354 aaPredicted RBP13.12□□□□□ -0.31
LITAF-203ENST00000413364 VEGFBP49765 207 aa13.12□□□□□ -0.31
LITAF-203ENST00000413364 BCAP31P51572 246 aa13.12□□□□□ -0.31
LITAF-203ENST00000413364 GEMP55040 296 aa13.12□□□□□ -0.31
LITAF-203ENST00000413364 TAF10Q12962 218 aa13.12□□□□□ -0.31
LITAF-203ENST00000413364 PDE1CQ14123 709 aaPredicted RBP13.12□□□□□ -0.31
LITAF-203ENST00000413364 SMAD1Q15797 465 aaKnown RBP13.12□□□□□ -0.31
LITAF-203ENST00000413364 CTC1Q2NKJ3 1217 aa13.12□□□□□ -0.31
LITAF-203ENST00000413364 MGAT5BQ3V5L5 792 aa13.12□□□□□ -0.31
LITAF-203ENST00000413364 MS4A13Q5J8X5 152 aa13.12□□□□□ -0.31
LITAF-203ENST00000413364 RTP2Q5QGT7 225 aa13.12□□□□□ -0.31
LITAF-203ENST00000413364 TEDDM1Q5T9Z0 273 aa13.12□□□□□ -0.31
LITAF-203ENST00000413364 ATG16L1Q676U5 607 aa13.12□□□□□ -0.31
LITAF-203ENST00000413364 DHRS4L2Q6PKH6 230 aa13.12□□□□□ -0.31
LITAF-203ENST00000413364 RNF19BQ6ZMZ0 732 aa13.12□□□□□ -0.31
LITAF-203ENST00000413364 NUDCD3Q8IVD9 361 aa13.12□□□□□ -0.31
LITAF-203ENST00000413364 ATP6V0D2Q8N8Y2 350 aa13.12□□□□□ -0.31
LITAF-203ENST00000413364 ATP2A3Q93084 1043 aa13.12□□□□□ -0.31
LITAF-203ENST00000413364 ISL2Q96A47 359 aa13.12□□□□□ -0.31
LITAF-203ENST00000413364 E2F7Q96AV8 911 aa13.12□□□□□ -0.31
LITAF-203ENST00000413364 BTN2A3PQ96KV6 586 aa13.12□□□□□ -0.31
LITAF-203ENST00000413364 C7orf26Q96N11 449 aa13.12□□□□□ -0.31
LITAF-203ENST00000413364 RBBP8Q99708 897 aa13.12□□□□□ -0.31
LITAF-203ENST00000413364 SEPT5Q99719 369 aaPredicted RBP13.12□□□□□ -0.31
LITAF-203ENST00000413364 BTBD10Q9BSF8 475 aa13.12□□□□□ -0.31
LITAF-203ENST00000413364 KIFC1Q9BW19 673 aa13.12□□□□□ -0.31
LITAF-203ENST00000413364 SLC7A5P2Q9GIP4 190 aa13.12□□□□□ -0.31
LITAF-203ENST00000413364 CRISPLD1Q9H336 500 aa13.12□□□□□ -0.31
LITAF-203ENST00000413364 CHRAC1Q9NRG0 131 aa13.12□□□□□ -0.31
LITAF-203ENST00000413364 RBM22Q9NW64 420 aaKnown RBP eCLIP13.12□□□□□ -0.31
LITAF-203ENST00000413364 DCDC2Q9UHG0 476 aa13.12□□□□□ -0.31
LITAF-203ENST00000413364 IPO11Q9UI26 975 aaKnown RBP13.12□□□□□ -0.31
LITAF-203ENST00000413364 DCTN4Q9UJW0 460 aa13.12□□□□□ -0.31
LITAF-203ENST00000413364 HLA-DQB2P05538 268 aa13.11□□□□□ -0.31
LITAF-203ENST00000413364 SPRP35270 261 aaPredicted RBP13.11□□□□□ -0.31
LITAF-203ENST00000413364 PPARGP37231 505 aaPredicted RBP13.11□□□□□ -0.31
LITAF-203ENST00000413364 RXRGP48443 463 aa13.11□□□□□ -0.31
LITAF-203ENST00000413364 NDST2P52849 883 aa13.11□□□□□ -0.31
LITAF-203ENST00000413364 LIMK2P53671 638 aa13.11□□□□□ -0.31
LITAF-203ENST00000413364 ANO4Q32M45 955 aa13.11□□□□□ -0.31
LITAF-203ENST00000413364 ANKS3Q6ZW76 656 aa13.11□□□□□ -0.31
LITAF-203ENST00000413364 STRA8Q7Z7C7 330 aa13.11□□□□□ -0.31
LITAF-203ENST00000413364 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.11□□□□□ -0.31
LITAF-203ENST00000413364 SPERTQ8NA61 448 aa13.11□□□□□ -0.31
LITAF-203ENST00000413364 C2orf15Q8WU43 125 aaKnown RBP13.11□□□□□ -0.31
LITAF-203ENST00000413364 FATE1Q969F0 183 aa13.11□□□□□ -0.31
LITAF-203ENST00000413364 BIRC8Q96P09 236 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 351.9 ms