RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 LIN28AQ9H9Z2 209 aaKnown RBP17.76■□□□□ 0.43
SDCBP-202ENST00000413219 IGSF5Q9NSI5 407 aa17.76■□□□□ 0.43
SDCBP-202ENST00000413219 MTF2Q9Y483 593 aaPredicted RBP17.76■□□□□ 0.43
SDCBP-202ENST00000413219 SOCS2O14508 198 aa17.76■□□□□ 0.43
SDCBP-202ENST00000413219 AKAP10O43572 662 aa17.76■□□□□ 0.43
SDCBP-202ENST00000413219 TIPRLO75663 272 aa17.76■□□□□ 0.43
SDCBP-202ENST00000413219 ANXA9O76027 345 aa17.76■□□□□ 0.43
SDCBP-202ENST00000413219 IPO13O94829 963 aaKnown RBP17.76■□□□□ 0.43
SDCBP-202ENST00000413219 C7P10643 843 aa17.76■□□□□ 0.43
SDCBP-202ENST00000413219 NELFEP18615 380 aaKnown RBP17.76■□□□□ 0.43
SDCBP-202ENST00000413219 ARNTP27540 789 aa17.76■□□□□ 0.43
SDCBP-202ENST00000413219 LRPAP1P30533 357 aa17.76■□□□□ 0.43
SDCBP-202ENST00000413219 C1QTNF8P60827 252 aa17.76■□□□□ 0.43
SDCBP-202ENST00000413219 NOTUMQ6P988 496 aa17.76■□□□□ 0.43
SDCBP-202ENST00000413219 CLEC20AQ6ZU45 233 aa17.76■□□□□ 0.43
SDCBP-202ENST00000413219 PAQR9Q6ZVX9 377 aa17.76■□□□□ 0.43
SDCBP-202ENST00000413219 CUZD1Q86UP6 607 aa17.76■□□□□ 0.43
SDCBP-202ENST00000413219 TOP6BLQ8N6T0 577 aa17.76■□□□□ 0.43
SDCBP-202ENST00000413219 SMYD1Q8NB12 490 aa17.76■□□□□ 0.43
SDCBP-202ENST00000413219 PCYOX1LQ8NBM8 494 aa17.76■□□□□ 0.43
SDCBP-202ENST00000413219 PPTC7Q8NI37 304 aa17.76■□□□□ 0.43
SDCBP-202ENST00000413219 HSPBAP1Q96EW2 488 aa17.76■□□□□ 0.43
SDCBP-202ENST00000413219 TRMOQ9BU70 441 aa17.76■□□□□ 0.43
SDCBP-202ENST00000413219 TANC1Q9C0D5 1861 aa17.76■□□□□ 0.43
SDCBP-202ENST00000413219 TCAF1Q9Y4C2 921 aa17.76■□□□□ 0.43
SDCBP-202ENST00000413219 NRCAMQ92823 1304 aa17.76■□□□□ 0.43
SDCBP-202ENST00000413219 CCDC78A2IDD5 438 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 ZNF839A8K0R7 811 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 BEST1O76090 585 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 F9P00740 461 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 HNRNPCP07910 306 aaKnown RBP eCLIP17.75■□□□□ 0.43
SDCBP-202ENST00000413219 CKMT2P17540 419 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 PAMP19021 973 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 SLC1A2P43004 574 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 MAGEA8P43361 318 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 SLC7A2P52569 658 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 DAOAP59103 153 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 CCNA1P78396 465 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 MAP7D1Q3KQU3 841 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 DALRD3Q5D0E6 543 aaKnown RBP17.75■□□□□ 0.43
SDCBP-202ENST00000413219 AGAP9Q5VTM2 703 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 PRMT9Q6P2P2 845 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 KIAA0408Q6ZU52 694 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 CATSPER4Q7RTX7 472 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 OSTM1Q86WC4 334 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 CLVS1Q8IUQ0 354 aaPredicted RBP17.75■□□□□ 0.43
SDCBP-202ENST00000413219 SLC22A9Q8IVM8 553 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 SPATA6LQ8N4H0 392 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 TERB1Q8NA31 727 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 ZNF420Q8TAQ5 688 aaPredicted RBP17.75■□□□□ 0.43
SDCBP-202ENST00000413219 PPP1R2P1Q96PQ5 205 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 FCRL5Q96RD9 977 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 HIPK3Q9H422 1215 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 CDHR5Q9HBB8 845 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 SBF1O95248 1867 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 DYTNA2CJ06 578 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 A8MT66 165 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 FZD9O00144 591 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 NRP1O14786 923 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 RBP1P09455 135 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 FAM163BP0C2L3 166 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 EPHX2P34913 555 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 CDH15P55291 814 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 PCBP1Q15365 356 aaKnown RBP eCLIP17.75■□□□□ 0.43
SDCBP-202ENST00000413219 GRIK4Q16099 956 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 MARCH8Q5T0T0 291 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 KIAA0930Q6ICG6 404 aaPredicted RBP17.75■□□□□ 0.43
SDCBP-202ENST00000413219 ESRP1Q6NXG1 681 aaKnown RBP17.75■□□□□ 0.43
SDCBP-202ENST00000413219 TTC33Q6PID6 262 aaPredicted RBP17.75■□□□□ 0.43
SDCBP-202ENST00000413219 OTOP3Q7RTS5 596 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 PATL1Q86TB9 770 aaKnown RBP17.75■□□□□ 0.43
SDCBP-202ENST00000413219 COLGALT2Q8IYK4 626 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 CANT1Q8WVQ1 401 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 SGF29Q96ES7 293 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 SLC45A3Q96JT2 553 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 PHF12Q96QT6 1004 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 C16orf70Q9BSU1 422 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 ULBP1Q9BZM6 244 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 ADAMTS10Q9H324 1103 aa17.75■□□□□ 0.43
SDCBP-202ENST00000413219 A0A0G2JLL6 359 aaPredicted RBP17.74■□□□□ 0.43
SDCBP-202ENST00000413219 SMIM28A0A1B0GU29 152 aa17.74■□□□□ 0.43
SDCBP-202ENST00000413219 CLDN5O00501 218 aa17.74■□□□□ 0.43
SDCBP-202ENST00000413219 CLASP2O75122 1294 aaKnown RBP17.74■□□□□ 0.43
SDCBP-202ENST00000413219 CPB1P15086 417 aa17.74■□□□□ 0.43
SDCBP-202ENST00000413219 KCNE1P15382 129 aa17.74■□□□□ 0.43
SDCBP-202ENST00000413219 HDCP19113 662 aa17.74■□□□□ 0.43
SDCBP-202ENST00000413219 ATP6V1B2P21281 511 aa17.74■□□□□ 0.43
SDCBP-202ENST00000413219 GRIA3P42263 894 aa17.74■□□□□ 0.43
SDCBP-202ENST00000413219 STX1BP61266 288 aa17.74■□□□□ 0.43
SDCBP-202ENST00000413219 INPP5AQ14642 412 aa17.74■□□□□ 0.43
SDCBP-202ENST00000413219 PPP1R3AQ16821 1122 aa17.74■□□□□ 0.43
SDCBP-202ENST00000413219 DENND5AQ6IQ26 1287 aa17.74■□□□□ 0.43
SDCBP-202ENST00000413219 PRRT2Q7Z6L0 340 aaPredicted RBP17.74■□□□□ 0.43
SDCBP-202ENST00000413219 EMID1Q96A84 441 aaPredicted RBP17.74■□□□□ 0.43
SDCBP-202ENST00000413219 C12orf43Q96C57 262 aaKnown RBP17.74■□□□□ 0.43
SDCBP-202ENST00000413219 HOPXQ9BPY8 73 aaPredicted RBP17.74■□□□□ 0.43
SDCBP-202ENST00000413219 GPATCH1Q9BRR8 931 aaKnown RBP17.74■□□□□ 0.43
SDCBP-202ENST00000413219 TREX1Q9NSU2 369 aa17.74■□□□□ 0.43
SDCBP-202ENST00000413219 ABCD2Q9UBJ2 740 aa17.74■□□□□ 0.43
SDCBP-202ENST00000413219 FBXO5Q9UKT4 447 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms