RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 TNKS2Q9H2K2 1166 aa6.71□□□□□ -1.34
VPS41-204ENST00000413141 UBE2ZQ9H832 354 aaPredicted RBP6.71□□□□□ -1.34
VPS41-204ENST00000413141 ROPN1Q9HAT0 212 aaPredicted RBP6.71□□□□□ -1.34
VPS41-204ENST00000413141 MRM3Q9HC36 420 aaKnown RBP6.71□□□□□ -1.34
VPS41-204ENST00000413141 CHRAC1Q9NRG0 131 aa6.71□□□□□ -1.34
VPS41-204ENST00000413141 GTSE1Q9NYZ3 720 aa6.71□□□□□ -1.34
VPS41-204ENST00000413141 PSMC3IPQ9P2W1 217 aaPredicted RBP6.71□□□□□ -1.34
VPS41-204ENST00000413141 DEC1Q9P2X7 70 aa6.71□□□□□ -1.34
VPS41-204ENST00000413141 PRKAG3Q9UGI9 489 aa6.71□□□□□ -1.34
VPS41-204ENST00000413141 LGALS13Q9UHV8 139 aa6.71□□□□□ -1.34
VPS41-204ENST00000413141 SLC24A2Q9UI40 661 aa6.71□□□□□ -1.34
VPS41-204ENST00000413141 ERVW-1Q9UQF0 538 aa6.71□□□□□ -1.34
VPS41-204ENST00000413141 CHKBQ9Y259 395 aa6.71□□□□□ -1.34
VPS41-204ENST00000413141 TCAF1Q9Y4C2 921 aa6.71□□□□□ -1.34
VPS41-204ENST00000413141 ARIH1Q9Y4X5 557 aaPredicted RBP6.71□□□□□ -1.34
VPS41-204ENST00000413141 RAI2Q9Y5P3 530 aa6.71□□□□□ -1.34
VPS41-204ENST00000413141 RPS6KL1Q9Y6S9 549 aa6.71□□□□□ -1.34
VPS41-204ENST00000413141 MYOFQ9NZM1 2061 aa6.71□□□□□ -1.34
VPS41-204ENST00000413141 TICRRQ7Z2Z1 1910 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.7□□□□□ -1.34
VPS41-204ENST00000413141 TLDC2A0PJX2 215 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 MAGEB16A2A368 324 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 HEATR9A2RTY3 570 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 FAM159BA6NKW6 160 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.7□□□□□ -1.34
VPS41-204ENST00000413141 HMGB1P1B2RPK0 211 aaPredicted RBP6.7□□□□□ -1.34
VPS41-204ENST00000413141 C2CD4DB7Z1M9 353 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 PRRT4C9JH25 899 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 POC1B-GALNT4F8VUJ3 575 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 TRAFD1O14545 582 aaPredicted RBP6.7□□□□□ -1.34
VPS41-204ENST00000413141 RGS16O15492 202 aaPredicted RBP6.7□□□□□ -1.34
VPS41-204ENST00000413141 MBTPS2O43462 519 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 HTRA2O43464 458 aaPredicted RBP6.7□□□□□ -1.34
VPS41-204ENST00000413141 FZD6O60353 706 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 SOCS5O75159 536 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 PIAS1O75925 651 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 PIGNO95427 931 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 PRLP01236 227 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 PRKCGP05129 697 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 ATP5BP06576 529 aaKnown RBP6.7□□□□□ -1.34
VPS41-204ENST00000413141 SRPRAP08240 638 aaKnown RBP6.7□□□□□ -1.34
VPS41-204ENST00000413141 PDHA1P08559 390 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 DLDP09622 509 aaKnown RBP6.7□□□□□ -1.34
VPS41-204ENST00000413141 ALADP13716 330 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 FOSL2P15408 326 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 ADRA1DP25100 572 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 NMBRP28336 390 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 SERPINA4P29622 427 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 GJA4P35212 333 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 GRIA4P48058 902 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 CCNHP51946 323 aaPredicted RBP6.7□□□□□ -1.34
VPS41-204ENST00000413141 SNRPD1P62314 119 aaKnown RBP6.7□□□□□ -1.34
VPS41-204ENST00000413141 NR1H3Q13133 447 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 NAB1Q13506 487 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 SEPT6Q14141 434 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 EIF4HQ15056 248 aaKnown RBP6.7□□□□□ -1.34
VPS41-204ENST00000413141 RASA2Q15283 850 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 TMED2Q15363 201 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 DLG2Q15700 870 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 ITPRIPL2Q3MIP1 535 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 ANKRD20A4Q4UJ75 823 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 TNFAIP8L3Q5GJ75 292 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 KCTD16Q68DU8 428 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 PKN3Q6P5Z2 889 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 ZNF449Q6P9G9 518 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 CES3Q6UWW8 571 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 Q6ZVU0 165 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 CYS1Q717R9 158 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 MARK2Q7KZI7 788 aaKnown RBP6.7□□□□□ -1.34
VPS41-204ENST00000413141 Q7L0L9 218 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 RASSF3Q86WH2 238 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 UNC5BQ8IZJ1 945 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 LPCAT1Q8NF37 534 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 TTC8Q8TAM2 541 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 FRS2Q8WU20 508 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 PDCD6IPQ8WUM4 868 aaKnown RBP6.7□□□□□ -1.34
VPS41-204ENST00000413141 DCAKDQ8WVC6 231 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 SLC44A1Q8WWI5 657 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 VOPP1Q96AW1 172 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 TLCD1Q96CP7 247 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 MFSD3Q96ES6 412 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 CERS2Q96G23 380 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 ZNF778Q96MU6 729 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 FCRL3Q96P31 734 aaPredicted RBP6.7□□□□□ -1.34
VPS41-204ENST00000413141 TUBGCP5Q96RT8 1024 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 CDX2Q99626 313 aaPredicted RBP6.7□□□□□ -1.34
VPS41-204ENST00000413141 ADGRE3Q9BY15 652 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 CENPHQ9H3R5 247 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 ATP13A3Q9H7F0 1226 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 SMYD2Q9NRG4 433 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 TREX1Q9NSU2 369 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 MOCS1Q9NZB8 636 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 IL1RAPL1Q9NZN1 696 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 OGFRQ9NZT2 677 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 VPS18Q9P253 973 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 EVLQ9UI08 416 aaPredicted RBP6.7□□□□□ -1.34
VPS41-204ENST00000413141 SLCO3A1Q9UIG8 710 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 PCDHGC4Q9Y5F7 938 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 SPO11Q9Y5K1 396 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 FAM169AQ9Y6X4 670 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms