RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 ATXN7L3BQ96GX2 97 aa8.7□□□□□ -1.02
HMGN1P34-201ENST00000413023 TBATAQ96M53 351 aa8.7□□□□□ -1.02
HMGN1P34-201ENST00000413023 PPP1R2P1Q96PQ5 205 aa8.7□□□□□ -1.02
HMGN1P34-201ENST00000413023 HTATIP2Q9BUP3 242 aa8.7□□□□□ -1.02
HMGN1P34-201ENST00000413023 CINPQ9BW66 212 aaPredicted RBP8.7□□□□□ -1.02
HMGN1P34-201ENST00000413023 C1QTNF1Q9BXJ1 281 aa8.7□□□□□ -1.02
HMGN1P34-201ENST00000413023 FSD1LQ9BXM9 530 aa8.7□□□□□ -1.02
HMGN1P34-201ENST00000413023 PBX4Q9BYU1 374 aa8.7□□□□□ -1.02
HMGN1P34-201ENST00000413023 VPS11Q9H270 941 aa8.7□□□□□ -1.02
HMGN1P34-201ENST00000413023 TDP1Q9NUW8 608 aa8.7□□□□□ -1.02
HMGN1P34-201ENST00000413023 PCMTD2Q9NV79 361 aa8.7□□□□□ -1.02
HMGN1P34-201ENST00000413023 ZFATQ9P243 1243 aa8.7□□□□□ -1.02
HMGN1P34-201ENST00000413023 VPS28Q9UK41 221 aa8.7□□□□□ -1.02
HMGN1P34-201ENST00000413023 RWDD3Q9Y3V2 267 aa8.7□□□□□ -1.02
HMGN1P34-201ENST00000413023 ARL5AQ9Y689 179 aa8.7□□□□□ -1.02
HMGN1P34-201ENST00000413023 DOCK6Q96HP0 2047 aa8.7□□□□□ -1.02
HMGN1P34-201ENST00000413023 TM9SF1O15321 606 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 FZD6O60353 706 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 SNX3O60493 162 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 PAPSS2O95340 614 aaPredicted RBP8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 S1PR4O95977 384 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 PENKP01210 267 aaPredicted RBP8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 PROCP04070 461 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 C2P06681 752 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 BGNP21810 368 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 CNTFP26441 200 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 HLA-FP30511 346 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 HOXA9P31269 272 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 CA5AP35218 305 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 SPRP35270 261 aaPredicted RBP8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 VIPR2P41587 438 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 ABL2P42684 1182 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 NRIP1P48552 1158 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 SERPINB4P48594 390 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 IRX4P78413 519 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 TIAL1Q01085 375 aaKnown RBP eCLIP8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 IL9RQ01113 521 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 NSUN2Q08J23 767 aaKnown RBP eCLIP8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 DLG1Q12959 904 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 SLC14A2Q15849 920 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 ZNF77Q15935 545 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 SPRED3Q2MJR0 410 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 HSF5Q4G112 596 aaPredicted RBP8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 INO80DQ53TQ3 878 aaPredicted RBP8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 TMEM215Q68D42 235 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 PDPK2PQ6A1A2 396 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 KIAA0930Q6ICG6 404 aaPredicted RBP8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 TMC5Q6UXY8 1006 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 FAM47EQ6ZV65 393 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 OTOAQ7RTW8 1153 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 PTAR1Q7Z6K3 402 aaPredicted RBP8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 KIAA0907Q7Z7F0 614 aaPredicted RBP8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 CLEC14AQ86T13 490 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 SLC41A1Q8IVJ1 513 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 TTC30BQ8N4P2 665 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 C2CD4AQ8NCU7 369 aaPredicted RBP8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 ARMC2Q8NEN0 867 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 OR13C4Q8NGS5 318 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 ACMSDQ8TDX5 336 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 PTCD2Q8WV60 388 aaKnown RBP8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 DYDC1Q8WWB3 177 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 CDKL2Q92772 493 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 IRF7Q92985 503 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 THOC1Q96FV9 657 aaKnown RBP8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 VPS39Q96JC1 886 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 MECRQ9BV79 373 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 TDRD1Q9BXT4 1180 aaKnown RBP8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 C20orf27Q9GZN8 174 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 SCUBE2Q9NQ36 999 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 SNX15Q9NRS6 342 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 MKS1Q9NXB0 559 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 KIAA1522Q9P206 1035 aaPredicted RBP8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 SLCO3A1Q9UIG8 710 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 LSM7Q9UK45 103 aaKnown RBP8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 FBXO5Q9UKT4 447 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 ZNF510Q9Y2H8 683 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 MTF2Q9Y483 593 aaPredicted RBP8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 RAI2Q9Y5P3 530 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 WNT6Q9Y6F9 365 aa8.69□□□□□ -1.02
HMGN1P34-201ENST00000413023 OBSL1O75147 1896 aa8.68□□□□□ -1.02
HMGN1P34-201ENST00000413023 HEATR9A2RTY3 570 aa8.68□□□□□ -1.02
HMGN1P34-201ENST00000413023 CCDC162PA2VCL2 907 aa8.68□□□□□ -1.02
HMGN1P34-201ENST00000413023 TRAFD1O14545 582 aaPredicted RBP8.68□□□□□ -1.02
HMGN1P34-201ENST00000413023 LINC01565O15544 149 aa8.68□□□□□ -1.02
HMGN1P34-201ENST00000413023 PHGDHO43175 533 aaKnown RBP8.68□□□□□ -1.02
HMGN1P34-201ENST00000413023 PLIN3O60664 434 aa8.68□□□□□ -1.02
HMGN1P34-201ENST00000413023 EDF1O60869 148 aaKnown RBP8.68□□□□□ -1.02
HMGN1P34-201ENST00000413023 BPGMP07738 259 aa8.68□□□□□ -1.02
HMGN1P34-201ENST00000413023 SERPINF2P08697 491 aa8.68□□□□□ -1.02
HMGN1P34-201ENST00000413023 POU2F2P09086 479 aa8.68□□□□□ -1.02
HMGN1P34-201ENST00000413023 CISD3P0C7P0 127 aa8.68□□□□□ -1.02
HMGN1P34-201ENST00000413023 TCF3P15923 654 aa8.68□□□□□ -1.02
HMGN1P34-201ENST00000413023 HLA-DPA1P20036 260 aa8.68□□□□□ -1.02
HMGN1P34-201ENST00000413023 DDX6P26196 483 aaKnown RBP eCLIP8.68□□□□□ -1.02
HMGN1P34-201ENST00000413023 TYK2P29597 1187 aa8.68□□□□□ -1.02
HMGN1P34-201ENST00000413023 ALDH3A1P30838 453 aa8.68□□□□□ -1.02
HMGN1P34-201ENST00000413023 GBP2P32456 591 aaPredicted RBP8.68□□□□□ -1.02
HMGN1P34-201ENST00000413023 SLC1A2P43004 574 aa8.68□□□□□ -1.02
HMGN1P34-201ENST00000413023 STK19P49842 368 aaPredicted RBP8.68□□□□□ -1.02
HMGN1P34-201ENST00000413023 CDKN1CP49918 316 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms