RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 TTC7BQ86TV6 843 aa22.57■■□□□ 1.2
PTCD3-203ENST00000409783 ZC3H18Q86VM9 953 aaKnown RBP22.57■■□□□ 1.2
PTCD3-203ENST00000409783 ZCCHC9Q8N567 271 aaKnown RBP22.57■■□□□ 1.2
PTCD3-203ENST00000409783 GPR161Q8N6U8 529 aaKnown RBP22.57■■□□□ 1.2
PTCD3-203ENST00000409783 TFB1MQ8WVM0 346 aaKnown RBP22.57■■□□□ 1.2
PTCD3-203ENST00000409783 QKIQ96PU8 341 aaKnown RBP eCLIP22.57■■□□□ 1.21e-11■■■■■ 28.1
PTCD3-203ENST00000409783 TLR10Q9BXR5 811 aa22.57■■□□□ 1.2
PTCD3-203ENST00000409783 CAPN10Q9HC96 672 aa22.57■■□□□ 1.2
PTCD3-203ENST00000409783 TPX2Q9ULW0 747 aaKnown RBP22.57■■□□□ 1.2
PTCD3-203ENST00000409783 PCDHGC4Q9Y5F7 938 aa22.57■■□□□ 1.2
PTCD3-203ENST00000409783 A0A1W2PQU0 124 aa22.56■■□□□ 1.2
PTCD3-203ENST00000409783 UPK3BL1B0FP48 263 aa22.56■■□□□ 1.2
PTCD3-203ENST00000409783 UPK3BL2E5RIL1 263 aa22.56■■□□□ 1.2
PTCD3-203ENST00000409783 SOCS5O75159 536 aa22.56■■□□□ 1.2
PTCD3-203ENST00000409783 TJP3O95049 919 aa22.56■■□□□ 1.2
PTCD3-203ENST00000409783 OTUD4Q01804 1114 aaKnown RBP22.56■■□□□ 1.2
PTCD3-203ENST00000409783 WASHC5Q12768 1159 aa22.56■■□□□ 1.2
PTCD3-203ENST00000409783 XRCC4Q13426 336 aa22.56■■□□□ 1.2
PTCD3-203ENST00000409783 RPS6KA1Q15418 735 aa22.56■■□□□ 1.2
PTCD3-203ENST00000409783 ZNF284Q2VY69 593 aa22.56■■□□□ 1.2
PTCD3-203ENST00000409783 HORMAD1Q86X24 394 aa22.56■■□□□ 1.2
PTCD3-203ENST00000409783 CEP41Q9BYV8 373 aa22.56■■□□□ 1.2
PTCD3-203ENST00000409783 MIR1-1HGQ9H1L0 117 aa22.56■■□□□ 1.2
PTCD3-203ENST00000409783 TM9SF3Q9HD45 589 aa22.56■■□□□ 1.2
PTCD3-203ENST00000409783 SUSD2Q9UGT4 822 aa22.56■■□□□ 1.2
PTCD3-203ENST00000409783 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.56■■□□□ 1.2
PTCD3-203ENST00000409783 A0A1B0GTW7 788 aa22.55■■□□□ 1.2
PTCD3-203ENST00000409783 TCRBV7S2A1N4TA0A589 114 aa22.55■■□□□ 1.2
PTCD3-203ENST00000409783 HACD1B0YJ81 288 aa22.55■■□□□ 1.2
PTCD3-203ENST00000409783 WNT9AO14904 365 aa22.55■■□□□ 1.2
PTCD3-203ENST00000409783 ZSCAN12O43309 604 aa22.55■■□□□ 1.2
PTCD3-203ENST00000409783 TSPAN6O43657 245 aa22.55■■□□□ 1.2
PTCD3-203ENST00000409783 PCDH8O95206 1070 aa22.55■■□□□ 1.2
PTCD3-203ENST00000409783 MMP2P08253 660 aa22.55■■□□□ 1.2
PTCD3-203ENST00000409783 SERPINF2P08697 491 aa22.55■■□□□ 1.2
PTCD3-203ENST00000409783 CES1P23141 567 aa22.55■■□□□ 1.2
PTCD3-203ENST00000409783 PTPN3P26045 913 aa22.55■■□□□ 1.2
PTCD3-203ENST00000409783 MAT2AP31153 395 aaKnown RBP22.55■■□□□ 1.2
PTCD3-203ENST00000409783 SUOXP51687 545 aa22.55■■□□□ 1.2
PTCD3-203ENST00000409783 IRX4P78413 519 aa22.55■■□□□ 1.2
PTCD3-203ENST00000409783 ITKQ08881 620 aa22.55■■□□□ 1.2
PTCD3-203ENST00000409783 TEX44Q53QW1 395 aa22.55■■□□□ 1.2
PTCD3-203ENST00000409783 SLC45A4Q5BKX6 768 aa22.55■■□□□ 1.2
PTCD3-203ENST00000409783 TRIM61Q5EBN2 209 aa22.55■■□□□ 1.2
PTCD3-203ENST00000409783 SEL1L3Q68CR1 1132 aa22.55■■□□□ 1.2
PTCD3-203ENST00000409783 RABEPKQ7Z6M1 372 aa22.55■■□□□ 1.2
PTCD3-203ENST00000409783 KIAA2013Q8IYS2 634 aa22.55■■□□□ 1.2
PTCD3-203ENST00000409783 CEP76Q8TAP6 659 aa22.55■■□□□ 1.2
PTCD3-203ENST00000409783 RXFP3Q9NSD7 469 aa22.55■■□□□ 1.2
PTCD3-203ENST00000409783 PYCARDQ9ULZ3 195 aa22.55■■□□□ 1.2
PTCD3-203ENST00000409783 LAMA1P25391 3075 aa22.54■■□□□ 1.2
PTCD3-203ENST00000409783 KHNYNO15037 678 aaKnown RBP22.54■■□□□ 1.2
PTCD3-203ENST00000409783 BCAT2O15382 392 aaPredicted RBP22.54■■□□□ 1.2
PTCD3-203ENST00000409783 FZD6O60353 706 aa22.54■■□□□ 1.2
PTCD3-203ENST00000409783 FGL2Q14314 439 aa22.54■■□□□ 1.2
PTCD3-203ENST00000409783 CCDC181Q5TID7 509 aa22.54■■□□□ 1.2
PTCD3-203ENST00000409783 KIAA1161Q6NSJ0 714 aa22.54■■□□□ 1.2
PTCD3-203ENST00000409783 TEKT5Q96M29 485 aa22.54■■□□□ 1.2
PTCD3-203ENST00000409783 FAM118BQ9BPY3 351 aa22.54■■□□□ 1.2
PTCD3-203ENST00000409783 CARD9Q9H257 536 aa22.54■■□□□ 1.2
PTCD3-203ENST00000409783 C10orf88Q9H8K7 445 aa22.54■■□□□ 1.2
PTCD3-203ENST00000409783 PCDH12Q9NPG4 1184 aa22.54■■□□□ 1.2
PTCD3-203ENST00000409783 SEPT10Q9P0V9 454 aa22.54■■□□□ 1.2
PTCD3-203ENST00000409783 SLC6A14Q9UN76 642 aa22.54■■□□□ 1.2
PTCD3-203ENST00000409783 TP53BP1Q12888 1972 aaPredicted RBP22.53■■□□□ 1.2
PTCD3-203ENST00000409783 LNP1A1A4G5 178 aa22.53■■□□□ 1.2
PTCD3-203ENST00000409783 USP27XA6NNY8 438 aa22.53■■□□□ 1.2
PTCD3-203ENST00000409783 RIOK3O14730 519 aaKnown RBP22.53■■□□□ 1.2
PTCD3-203ENST00000409783 PGLSO95336 258 aa22.53■■□□□ 1.2
PTCD3-203ENST00000409783 PRKCGP05129 697 aa22.53■■□□□ 1.2
PTCD3-203ENST00000409783 GNSP15586 552 aa22.53■■□□□ 1.2
PTCD3-203ENST00000409783 CD68P34810 354 aaPredicted RBP22.53■■□□□ 1.2
PTCD3-203ENST00000409783 NUDT1P36639 197 aa22.53■■□□□ 1.2
PTCD3-203ENST00000409783 BNC1Q01954 994 aa22.53■■□□□ 1.2
PTCD3-203ENST00000409783 TMEM52BQ4KMG9 183 aa22.53■■□□□ 1.2
PTCD3-203ENST00000409783 PRPF39Q86UA1 669 aaKnown RBP22.53■■□□□ 1.2
PTCD3-203ENST00000409783 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.53■■□□□ 1.2
PTCD3-203ENST00000409783 HTR3CQ8WXA8 447 aa22.53■■□□□ 1.2
PTCD3-203ENST00000409783 KLK6Q92876 244 aa22.53■■□□□ 1.2
PTCD3-203ENST00000409783 TADA1Q96BN2 335 aa22.53■■□□□ 1.2
PTCD3-203ENST00000409783 FEM1CQ96JP0 617 aa22.53■■□□□ 1.2
PTCD3-203ENST00000409783 SLC6A18Q96N87 628 aa22.53■■□□□ 1.2
PTCD3-203ENST00000409783 AGAP3Q96P47 875 aa22.53■■□□□ 1.2
PTCD3-203ENST00000409783 C1QTNF2Q9BXJ5 285 aa22.53■■□□□ 1.2
PTCD3-203ENST00000409783 FSCN3Q9NQT6 498 aa22.53■■□□□ 1.2
PTCD3-203ENST00000409783 TRMT1Q9NXH9 659 aaKnown RBP22.53■■□□□ 1.2
PTCD3-203ENST00000409783 DMTF1Q9Y222 760 aa22.53■■□□□ 1.2
PTCD3-203ENST00000409783 R3HDM2Q9Y2K5 976 aaKnown RBP22.53■■□□□ 1.2
PTCD3-203ENST00000409783 TTLL3Q9Y4R7 772 aa22.53■■□□□ 1.2
PTCD3-203ENST00000409783 RAI2Q9Y5P3 530 aa22.53■■□□□ 1.2
PTCD3-203ENST00000409783 MTSS1O43312 755 aa22.52■■□□□ 1.2
PTCD3-203ENST00000409783 NEBLO76041 1014 aa22.52■■□□□ 1.2
PTCD3-203ENST00000409783 PRLP01236 227 aa22.52■■□□□ 1.2
PTCD3-203ENST00000409783 CFIP05156 583 aa22.52■■□□□ 1.2
PTCD3-203ENST00000409783 PDHA1P08559 390 aa22.52■■□□□ 1.2
PTCD3-203ENST00000409783 RBP3P10745 1247 aa22.52■■□□□ 1.2
PTCD3-203ENST00000409783 RBL1P28749 1068 aa22.52■■□□□ 1.2
PTCD3-203ENST00000409783 MMP12P39900 470 aa22.52■■□□□ 1.2
PTCD3-203ENST00000409783 EIF3EP60228 445 aaKnown RBP22.52■■□□□ 1.2
PTCD3-203ENST00000409783 RPS21P63220 83 aaKnown RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms