RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 CDKN2AP42771 156 aaKnown RBP4.7□□□□□ -1.66
CLK1-203ENST00000409769 GYG1P46976 350 aa4.7□□□□□ -1.66
CLK1-203ENST00000409769 TRAPPC10P48553 1259 aa4.7□□□□□ -1.66
CLK1-203ENST00000409769 SHC2P98077 582 aa4.7□□□□□ -1.66
CLK1-203ENST00000409769 PGM5Q15124 567 aa4.7□□□□□ -1.66
CLK1-203ENST00000409769 GRAMD1BQ3KR37 738 aa4.7□□□□□ -1.66
CLK1-203ENST00000409769 TTC39AQ5SRH9 613 aa4.7□□□□□ -1.66
CLK1-203ENST00000409769 VWA5B1Q5TIE3 1220 aa4.7□□□□□ -1.66
CLK1-203ENST00000409769 DLK2Q6UY11 383 aa4.7□□□□□ -1.66
CLK1-203ENST00000409769 RASGRP2Q7LDG7 609 aa4.7□□□□□ -1.66
CLK1-203ENST00000409769 MDGA2Q7Z553 956 aa4.7□□□□□ -1.66
CLK1-203ENST00000409769 TICAM2Q86XR7 235 aa4.7□□□□□ -1.66
CLK1-203ENST00000409769 CNTROBQ8N137 903 aa4.7□□□□□ -1.66
CLK1-203ENST00000409769 PTGR2Q8N8N7 351 aaPredicted RBP4.7□□□□□ -1.66
CLK1-203ENST00000409769 SPATA5Q8NB90 893 aa4.7□□□□□ -1.66
CLK1-203ENST00000409769 SLC44A5Q8NCS7 719 aa4.7□□□□□ -1.66
CLK1-203ENST00000409769 TDRD7Q8NHU6 1098 aaKnown RBP4.7□□□□□ -1.66
CLK1-203ENST00000409769 CLEC4CQ8WTT0 213 aa4.7□□□□□ -1.66
CLK1-203ENST00000409769 THAP4Q8WY91 577 aa4.7□□□□□ -1.66
CLK1-203ENST00000409769 EVI5LQ96CN4 794 aa4.7□□□□□ -1.66
CLK1-203ENST00000409769 TRAPPC9Q96Q05 1148 aa4.7□□□□□ -1.66
CLK1-203ENST00000409769 PIGSQ96S52 555 aa4.7□□□□□ -1.66
CLK1-203ENST00000409769 BRD8Q9H0E9 1235 aa4.7□□□□□ -1.66
CLK1-203ENST00000409769 HMG20BQ9P0W2 317 aa4.7□□□□□ -1.66
CLK1-203ENST00000409769 SALL1Q9NSC2 1324 aa4.7□□□□□ -1.66
CLK1-203ENST00000409769 A0A0G2JK05 382 aa4.69□□□□□ -1.66
CLK1-203ENST00000409769 CYP21A2P08686 494 aa4.69□□□□□ -1.66
CLK1-203ENST00000409769 TGFB3P10600 412 aa4.69□□□□□ -1.66
CLK1-203ENST00000409769 CHMLP26374 656 aa4.69□□□□□ -1.66
CLK1-203ENST00000409769 KCNJ4P48050 445 aa4.69□□□□□ -1.66
CLK1-203ENST00000409769 EFR3AQ14156 821 aa4.69□□□□□ -1.66
CLK1-203ENST00000409769 RPS6KA2Q15349 733 aa4.69□□□□□ -1.66
CLK1-203ENST00000409769 CAVIN4Q5BKX8 364 aa4.69□□□□□ -1.66
CLK1-203ENST00000409769 MANEAQ5SRI9 462 aa4.69□□□□□ -1.66
CLK1-203ENST00000409769 UBAP2Q5T6F2 1119 aaKnown RBP4.69□□□□□ -1.66
CLK1-203ENST00000409769 KRTAP5-11Q6L8G4 156 aa4.69□□□□□ -1.66
CLK1-203ENST00000409769 PDXDC1Q6P996 788 aa4.69□□□□□ -1.66
CLK1-203ENST00000409769 ZNF549Q6P9A3 640 aa4.69□□□□□ -1.66
CLK1-203ENST00000409769 ZNF793Q6ZN11 406 aa4.69□□□□□ -1.66
CLK1-203ENST00000409769 MYCT1Q8N699 235 aa4.69□□□□□ -1.66
CLK1-203ENST00000409769 KBTBD3Q8NAB2 608 aa4.69□□□□□ -1.66
CLK1-203ENST00000409769 SPPL3Q8TCT6 385 aa4.69□□□□□ -1.66
CLK1-203ENST00000409769 NLRP4Q96MN2 994 aa4.69□□□□□ -1.66
CLK1-203ENST00000409769 PSMD1Q99460 953 aa4.69□□□□□ -1.66
CLK1-203ENST00000409769 WDR83Q9BRX9 315 aaKnown RBP4.69□□□□□ -1.66
CLK1-203ENST00000409769 PAGR1Q9BTK6 254 aa4.69□□□□□ -1.66
CLK1-203ENST00000409769 SORBS1Q9BX66 1292 aaKnown RBP4.69□□□□□ -1.66
CLK1-203ENST00000409769 IL25Q9H293 177 aa4.69□□□□□ -1.66
CLK1-203ENST00000409769 IL21RQ9HBE5 538 aa4.69□□□□□ -1.66
CLK1-203ENST00000409769 PDE11AQ9HCR9 933 aa4.69□□□□□ -1.66
CLK1-203ENST00000409769 PTPRHQ9HD43 1115 aa4.69□□□□□ -1.66
CLK1-203ENST00000409769 CD209Q9NNX6 404 aa4.69□□□□□ -1.66
CLK1-203ENST00000409769 PAG1Q9NWQ8 432 aa4.69□□□□□ -1.66
CLK1-203ENST00000409769 BAG5Q9UL15 447 aa4.69□□□□□ -1.66
CLK1-203ENST00000409769 PCDHA10Q9Y5I2 948 aa4.69□□□□□ -1.66
CLK1-203ENST00000409769 FOCADQ5VW36 1801 aa4.69□□□□□ -1.66
CLK1-203ENST00000409769 LAMA4Q16363 1823 aa4.68□□□□□ -1.66
CLK1-203ENST00000409769 ECM29Q5VYK3 1845 aa4.68□□□□□ -1.66
CLK1-203ENST00000409769 ZNF814B7Z6K7 855 aa4.68□□□□□ -1.66
CLK1-203ENST00000409769 PRSS44E7EML9 344 aa4.68□□□□□ -1.66
CLK1-203ENST00000409769 SYF2O95926 243 aaKnown RBP4.68□□□□□ -1.66
CLK1-203ENST00000409769 HOXB9P17482 250 aaPredicted RBP4.68□□□□□ -1.66
CLK1-203ENST00000409769 CDC25AP30304 524 aa4.68□□□□□ -1.66
CLK1-203ENST00000409769 ADD2P35612 726 aa4.68□□□□□ -1.66
CLK1-203ENST00000409769 STAT1P42224 750 aa4.68□□□□□ -1.66
CLK1-203ENST00000409769 ALDH7A1P49419 539 aaKnown RBP4.68□□□□□ -1.66
CLK1-203ENST00000409769 PRKG1Q13976 671 aa4.68□□□□□ -1.66
CLK1-203ENST00000409769 DLGAP5Q15398 846 aa4.68□□□□□ -1.66
CLK1-203ENST00000409769 C10orf76Q5T2E6 689 aa4.68□□□□□ -1.66
CLK1-203ENST00000409769 GORABQ5T7V8 394 aa4.68□□□□□ -1.66
CLK1-203ENST00000409769 TTLL5Q6EMB2 1281 aa4.68□□□□□ -1.66
CLK1-203ENST00000409769 LRIG3Q6UXM1 1119 aa4.68□□□□□ -1.66
CLK1-203ENST00000409769 RFX8Q6ZV50 586 aa4.68□□□□□ -1.66
CLK1-203ENST00000409769 RILPL2Q969X0 211 aa4.68□□□□□ -1.66
CLK1-203ENST00000409769 C3orf49Q96BT1 292 aa4.68□□□□□ -1.66
CLK1-203ENST00000409769 MSI2Q96DH6 328 aaKnown RBP4.68□□□□□ -1.66
CLK1-203ENST00000409769 CTAGE1Q96RT6 745 aa4.68□□□□□ -1.66
CLK1-203ENST00000409769 HERPUD2Q9BSE4 406 aa4.68□□□□□ -1.66
CLK1-203ENST00000409769 SYT17Q9BSW7 474 aa4.68□□□□□ -1.66
CLK1-203ENST00000409769 FSD1Q9BTV5 496 aa4.68□□□□□ -1.66
CLK1-203ENST00000409769 SCNM1Q9BWG6 230 aa4.68□□□□□ -1.66
CLK1-203ENST00000409769 COA1Q9GZY4 146 aa4.68□□□□□ -1.66
CLK1-203ENST00000409769 MYLK2Q9H1R3 596 aa4.68□□□□□ -1.66
CLK1-203ENST00000409769 PIH1D3Q9NQM4 214 aaKnown RBP4.68□□□□□ -1.66
CLK1-203ENST00000409769 SELENONQ9NZV5 590 aa4.68□□□□□ -1.66
CLK1-203ENST00000409769 PKP3Q9Y446 797 aa4.68□□□□□ -1.66
CLK1-203ENST00000409769 FAM205AQ6ZU69 1335 aa4.68□□□□□ -1.66
CLK1-203ENST00000409769 RAD50Q92878 1312 aa4.68□□□□□ -1.66
CLK1-203ENST00000409769 ADAMTSL1Q8N6G6 1762 aa4.68□□□□□ -1.66
CLK1-203ENST00000409769 TIAM2Q8IVF5 1701 aa4.67□□□□□ -1.66
CLK1-203ENST00000409769 A0A0D9SFI3 127 aa4.67□□□□□ -1.66
CLK1-203ENST00000409769 AGAP5A6NIR3 686 aa4.67□□□□□ -1.66
CLK1-203ENST00000409769 LACTBL1A8MY62 500 aa4.67□□□□□ -1.66
CLK1-203ENST00000409769 HIP1O00291 1037 aa4.67□□□□□ -1.66
CLK1-203ENST00000409769 RNF113AO15541 343 aaKnown RBP4.67□□□□□ -1.66
CLK1-203ENST00000409769 SEPT4O43236 478 aa4.67□□□□□ -1.66
CLK1-203ENST00000409769 EPB41L2O43491 1005 aaKnown RBP4.67□□□□□ -1.66
CLK1-203ENST00000409769 KRT86O43790 486 aa4.67□□□□□ -1.66
CLK1-203ENST00000409769 ATG13O75143 517 aa4.67□□□□□ -1.66
CLK1-203ENST00000409769 TK1P04183 234 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms