RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 RABIFP47224 123 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 MORF4L2Q15014 288 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 SF3B4Q15427 424 aaKnown RBP eCLIP7.54□□□□□ -1.2
SH3D19-203ENST00000409598 SGO1Q5FBB7 561 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 HP1BP3Q5SSJ5 553 aaPredicted RBP7.54□□□□□ -1.2
SH3D19-203ENST00000409598 SPOCD1Q6ZMY3 1216 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 Q8N9G6 341 aaPredicted RBP7.54□□□□□ -1.2
SH3D19-203ENST00000409598 SNIP1Q8TAD8 396 aaKnown RBP7.54□□□□□ -1.2
SH3D19-203ENST00000409598 MR1Q95460 341 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 SLC35C1Q96A29 364 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 FBRSL1Q9HCM7 1045 aaKnown RBP7.54□□□□□ -1.2
SH3D19-203ENST00000409598 ATP6V1HQ9UI12 483 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 ALG6Q9Y672 507 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 TRBV23OR9-2A0A075B6M9 112 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 H3BNH8 94 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 JAK1P23458 1154 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 NTSP30990 170 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 HOXA9P31269 272 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 CTSOP43234 321 aaPredicted RBP7.54□□□□□ -1.2
SH3D19-203ENST00000409598 IRAK1P51617 712 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 BNC1Q01954 994 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 ADCY2Q08462 1091 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 HSPA14Q0VDF9 509 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 NR0B2Q15466 257 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 UPP1Q16831 310 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 TRIM61Q5EBN2 209 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 C1orf53Q5VUE5 145 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 KIAA1161Q6NSJ0 714 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 PSTKQ8IV42 348 aaKnown RBP7.54□□□□□ -1.2
SH3D19-203ENST00000409598 C12orf29Q8N999 325 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 TRPV1Q8NER1 839 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 ZFP28Q8NHY6 868 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 TMEM74Q96NL1 305 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 ZDHHC5Q9C0B5 715 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 CRISPLD2Q9H0B8 497 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 VCX3BQ9H321 246 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 RETREG1Q9H6L5 497 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 C3orf14Q9HBI5 128 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 CYP4F12Q9HCS2 524 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 ALKBH4Q9NXW9 302 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 TMCO1Q9UM00 188 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 PLAAQ9Y263 795 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 SNX24Q9Y343 169 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 GMNCA6NCL1 334 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 KRT87PA6NCN2 255 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 ENO4A6NNW6 628 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 ATMINO43313 823 aaPredicted RBP7.54□□□□□ -1.2
SH3D19-203ENST00000409598 CTPS1P17812 591 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 DAOAP59103 153 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 KCNMA1Q12791 1236 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 AUHQ13825 339 aaKnown RBP7.54□□□□□ -1.2
SH3D19-203ENST00000409598 RALGPS1Q5JS13 557 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 PHLDB3Q6NSJ2 640 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 SIAH1Q8IUQ4 282 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 MFSD6LQ8IWD5 586 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 ZNF384Q8TF68 577 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 HNRNPLLQ8WVV9 542 aaKnown RBP7.54□□□□□ -1.2
SH3D19-203ENST00000409598 THOC1Q96FV9 657 aaKnown RBP7.54□□□□□ -1.2
SH3D19-203ENST00000409598 WDR92Q96MX6 357 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 CASD1Q96PB1 797 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 DEPDC7Q96QD5 511 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 PCBD2Q9H0N5 130 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 KLHL28Q9NXS3 571 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 HSFX1Q9UBD0 423 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 SUCOQ9UBS9 1254 aaKnown RBP7.54□□□□□ -1.2
SH3D19-203ENST00000409598 SCOCQ9UIL1 159 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 FAM32AQ9Y421 112 aaKnown RBP7.54□□□□□ -1.2
SH3D19-203ENST00000409598 SGTAO43765 313 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 GPR32O75388 356 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 STMN1P16949 149 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 GRK2P25098 689 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 HSD17B2P37059 387 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 RANBP1P43487 201 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 MRPS22P82650 360 aaKnown RBP7.54□□□□□ -1.2
SH3D19-203ENST00000409598 GUCY1A3Q02108 690 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 WDR59Q6PJI9 974 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 Q7L0L9 218 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 TMEM126BQ8IUX1 230 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 VCX3AQ9NNX9 186 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 MRPL40Q9NQ50 206 aaKnown RBP7.54□□□□□ -1.2
SH3D19-203ENST00000409598 RCOR3Q9P2K3 495 aaPredicted RBP7.54□□□□□ -1.2
SH3D19-203ENST00000409598 COPS7AQ9UBW8 275 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 SLC6A14Q9UN76 642 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 PACSIN2Q9UNF0 486 aaPredicted RBP7.54□□□□□ -1.2
SH3D19-203ENST00000409598 MAPRE3Q9UPY8 281 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 OR10H1Q9Y4A9 318 aa7.54□□□□□ -1.2
SH3D19-203ENST00000409598 SHISA7A6NL88 538 aa7.53□□□□□ -1.2
SH3D19-203ENST00000409598 CD6P30203 668 aa7.53□□□□□ -1.2
SH3D19-203ENST00000409598 MIPP30301 263 aa7.53□□□□□ -1.2
SH3D19-203ENST00000409598 ADRA1BP35368 520 aa7.53□□□□□ -1.2
SH3D19-203ENST00000409598 NOVA1P51513 510 aaKnown RBP7.53□□□□□ -1.2
SH3D19-203ENST00000409598 ZNF132P52740 706 aa7.53□□□□□ -1.2
SH3D19-203ENST00000409598 NR1I3Q14994 352 aa7.53□□□□□ -1.2
SH3D19-203ENST00000409598 AP5B1Q2VPB7 878 aa7.53□□□□□ -1.2
SH3D19-203ENST00000409598 ARSIQ5FYB1 569 aa7.53□□□□□ -1.2
SH3D19-203ENST00000409598 CHST15Q7LFX5 561 aaPredicted RBP7.53□□□□□ -1.2
SH3D19-203ENST00000409598 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.53□□□□□ -1.2
SH3D19-203ENST00000409598 OR6K2Q8NGY2 324 aa7.53□□□□□ -1.2
SH3D19-203ENST00000409598 ZNF398Q8TD17 642 aa7.53□□□□□ -1.2
SH3D19-203ENST00000409598 ROGDIQ9GZN7 287 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms