RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 DNAJB1P25685 340 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 HTR1BP28222 390 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 ELK4P28324 431 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 RFC2P35250 354 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 ALDH7A1P49419 539 aaKnown RBP5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 RPS6P62753 249 aaKnown RBP5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 UBXN2AP68543 259 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 MAPK11Q15759 364 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 NFE2Q16621 373 aaPredicted RBP5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 ZNF280DQ6N043 979 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 FKBP9P1Q75LS8 142 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 NIPA1Q7RTP0 329 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 TBC1D21Q8IYX1 336 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 SVOPQ8N4V2 548 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 PQLC3Q8N755 202 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 RHOXF1Q8NHV9 184 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 OSCP1Q8WVF1 389 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 TTC9Q92623 222 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 ADNPQ9H2P0 1102 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 SLA2Q9H6Q3 261 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 LRRC40Q9H9A6 602 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 DIABLOQ9NR28 239 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 STMN3Q9NZ72 180 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 ZNF639Q9UID6 485 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 ZBTB21Q9ULJ3 1066 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 MRPL11Q9Y3B7 192 aaKnown RBP5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 AFG3L2Q9Y4W6 797 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 AHDC1Q5TGY3 1603 aaPredicted RBP5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 TTC24A2A3L6 582 aaPredicted RBP5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 CCDC78A2IDD5 438 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 FAM25AB3EWG3 89 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 FAM25CB3EWG5 89 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 FAM25GB3EWG6 89 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 SDHDO14521 159 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 NPHS1O60500 1241 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 DDHD2O94830 711 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 SEC24AO95486 1093 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 NDUFB10O96000 172 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 KRT19P08727 400 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 HSD17B1P14061 328 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 ZNF143P52747 638 aaPredicted RBP5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 GRAPQ13588 217 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 CDK10Q15131 360 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 PSMD5Q16401 504 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 AGKQ53H12 422 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 ZBTB41Q5SVQ8 909 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 CYP4V2Q6ZWL3 525 aaPredicted RBP5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 XYLT1Q86Y38 959 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 RAVER1Q8IY67 606 aaKnown RBP5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 EMC1Q8N766 993 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 GRAPLQ8TC17 118 aaPredicted RBP5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 URGCPQ8TCY9 931 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 HTRA1Q92743 480 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 EGLN2Q96KS0 407 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 IL12RB2Q99665 862 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 CLPBQ9H078 707 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 RPAP3Q9H6T3 665 aaPredicted RBP5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 LRRC4Q9HBW1 653 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 POLE4Q9NR33 117 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 AP4E1Q9UPM8 1137 aa5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 CAB39Q9Y376 341 aaPredicted RBP5.88□□□□□ -1.47
R3HDM1-202ENST00000409478 ZNF487B1APH4 448 aa5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 NRP1O14786 923 aa5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 MTSS1O43312 755 aa5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 NDUFS2O75306 463 aa5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 SNAP29O95721 258 aa5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 HMGCRP04035 888 aa5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 MYCLP1P12525 358 aaPredicted RBP5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 TM4SF1P30408 202 aa5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 PKLRP30613 574 aa5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 EIF2DP41214 584 aaKnown RBP5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 SLC26A2P50443 739 aa5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 ATP4BP51164 291 aa5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 MRPS15P82914 257 aaKnown RBP5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 TNFAIP2Q03169 654 aa5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 CLCQ05315 142 aa5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 FCHO2Q0JRZ9 810 aa5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 EPS8Q12929 822 aa5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 ITPK1Q13572 414 aa5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 FRG1Q14331 258 aaKnown RBP5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 BOLA3Q53S33 107 aa5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 SLFN12LQ6IEE8 588 aa5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 FSTL4Q6MZW2 842 aa5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 ZNF544Q6NX49 715 aa5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 ZCCHC8Q6NZY4 707 aaKnown RBP5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 TMEM179Q6ZVK1 233 aa5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 PRSS48Q7RTY5 328 aa5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 R3HCC1LQ7Z5L2 792 aaKnown RBP5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 STRA8Q7Z7C7 330 aa5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 SPPL2CQ8IUH8 684 aa5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 LYSMD2Q8IV50 215 aa5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 C8orf59Q8N0T1 100 aaPredicted RBP5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 ESX1Q8N693 406 aa5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 OR13J1Q8NGT2 312 aa5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 PSMA8Q8TAA3 256 aa5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.87□□□□□ -1.474e-10■■■■■ 86.3
R3HDM1-202ENST00000409478 SLC10A4Q96EP9 437 aa5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 FAM84AQ96KN4 292 aa5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 ZNF560Q96MR9 790 aa5.87□□□□□ -1.47
R3HDM1-202ENST00000409478 MUS81Q96NY9 551 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms