RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 SEMA4BQ9NPR2 832 aaPredicted RBP13.5□□□□□ -0.25
COL6A2-204ENST00000409416 ZDHHC2Q9UIJ5 367 aa13.5□□□□□ -0.25
COL6A2-204ENST00000409416 PCDHGC4Q9Y5F7 938 aa13.5□□□□□ -0.25
COL6A2-204ENST00000409416 C15orf38-AP3S2A0A0A6YYH1 394 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 ALDH1A2O94788 518 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 RPL14P50914 215 aaKnown RBP13.49□□□□□ -0.25
COL6A2-204ENST00000409416 TBX4P57082 545 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 CREB5Q02930 508 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 MSLNQ13421 630 aaPredicted RBP13.49□□□□□ -0.25
COL6A2-204ENST00000409416 GRB14Q14449 540 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 RARS2Q5T160 578 aaKnown RBP13.49□□□□□ -0.25
COL6A2-204ENST00000409416 C6orf52Q5T4I8 152 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 GPR158Q5T848 1215 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 FAM91A1Q658Y4 838 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 ARPINQ7Z6K5 226 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 DCUN1D1Q96GG9 259 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 DNAJC1Q96KC8 554 aaKnown RBP13.49□□□□□ -0.25
COL6A2-204ENST00000409416 GLT1D1Q96MS3 346 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 TRAPPC9Q96Q05 1148 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 SLC38A7Q9NVC3 462 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 DDX18Q9NVP1 670 aaKnown RBP13.49□□□□□ -0.25
COL6A2-204ENST00000409416 EGFL7Q9UHF1 273 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 TIMM22Q9Y584 194 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 SF3B1O75533 1304 aaKnown RBP eCLIP13.49□□□□□ -0.25
COL6A2-204ENST00000409416 SUPT3HB4E1H0 165 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 TIMM44O43615 452 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 DNAJA2O60884 412 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 SUPT3HO75486 399 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 PARNO95453 639 aaKnown RBP13.49□□□□□ -0.25
COL6A2-204ENST00000409416 AP2A1O95782 977 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 HAPLN1P10915 354 aaPredicted RBP13.49□□□□□ -0.25
COL6A2-204ENST00000409416 GJA1P17302 382 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 TFEBP19484 476 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 CHRM3P20309 590 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 LHX1P48742 406 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 USP46P62068 366 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 RPS24P62847 133 aaKnown RBP13.49□□□□□ -0.25
COL6A2-204ENST00000409416 CDH17Q12864 832 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 PFKFB4Q16877 469 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 TBC1D25Q3MII6 688 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 MAP3K21Q5TCX8 1036 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 AAGABQ6PD74 315 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 TPGS1Q6ZTW0 290 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 MILR1Q7Z6M3 343 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 MFN1Q8IWA4 741 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 FSTL5Q8N475 847 aaPredicted RBP13.49□□□□□ -0.25
COL6A2-204ENST00000409416 CNTD1Q8N815 330 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 JADE3Q92613 823 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 PRPF18Q99633 342 aaKnown RBP13.49□□□□□ -0.25
COL6A2-204ENST00000409416 HNRNPABQ99729 332 aaKnown RBP13.49□□□□□ -0.25
COL6A2-204ENST00000409416 TBL1YQ9BQ87 522 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 MTG1Q9BT17 334 aaPredicted RBP13.49□□□□□ -0.25
COL6A2-204ENST00000409416 MLPHQ9BV36 600 aaPredicted RBP13.49□□□□□ -0.25
COL6A2-204ENST00000409416 KATNAL1Q9BW62 490 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 CCSER2Q9H7U1 834 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 LMCD1Q9NZU5 365 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 TBKBP1A7MCY6 615 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 GIPC1O14908 333 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 GPR182O15218 404 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 CCNT2O60583 730 aaKnown RBP13.49□□□□□ -0.25
COL6A2-204ENST00000409416 AHSGP02765 367 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 HLA-DQB2P05538 268 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 FYNP06241 537 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 GK3PQ14409 553 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 MARC1Q5VT66 337 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 CST9Q5W186 159 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 NEPROQ6NW34 567 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 PAOXQ6QHF9 649 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 AMIGO2Q86SJ2 522 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 DENND1CQ8IV53 801 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 LPCAT1Q8NF37 534 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 OR13C4Q8NGS5 318 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 CENPIQ92674 756 aaPredicted RBP13.49□□□□□ -0.25
COL6A2-204ENST00000409416 ABTB1Q969K4 478 aaPredicted RBP13.49□□□□□ -0.25
COL6A2-204ENST00000409416 HMCESQ96FZ2 354 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 WDR41Q9HAD4 459 aa13.49□□□□□ -0.25
COL6A2-204ENST00000409416 LCTP09848 1927 aa13.48□□□□□ -0.25
COL6A2-204ENST00000409416 ARHGAP10A1A4S6 786 aa13.48□□□□□ -0.25
COL6A2-204ENST00000409416 G3V2L1 256 aa13.48□□□□□ -0.25
COL6A2-204ENST00000409416 HDAC3O15379 428 aa13.48□□□□□ -0.25
COL6A2-204ENST00000409416 PDAP1Q13442 181 aaKnown RBP13.48□□□□□ -0.25
COL6A2-204ENST00000409416 ITGA7Q13683 1181 aa13.48□□□□□ -0.25
COL6A2-204ENST00000409416 LDLRAD1Q5T700 205 aa13.48□□□□□ -0.25
COL6A2-204ENST00000409416 EPGNQ6UW88 154 aa13.48□□□□□ -0.25
COL6A2-204ENST00000409416 PQLC1Q8N2U9 271 aa13.48□□□□□ -0.25
COL6A2-204ENST00000409416 SIKE1Q9BRV8 207 aa13.48□□□□□ -0.25
COL6A2-204ENST00000409416 C1orf50Q9BV19 199 aa13.48□□□□□ -0.25
COL6A2-204ENST00000409416 PCDHAC1Q9H158 963 aa13.48□□□□□ -0.25
COL6A2-204ENST00000409416 GMPR2Q9P2T1 348 aaKnown RBP13.48□□□□□ -0.25
COL6A2-204ENST00000409416 ARL5AQ9Y689 179 aa13.48□□□□□ -0.25
COL6A2-204ENST00000409416 USP3Q9Y6I4 520 aa13.48□□□□□ -0.25
COL6A2-204ENST00000409416 DAB1O75553 588 aa13.48□□□□□ -0.25
COL6A2-204ENST00000409416 GKP32189 559 aa13.48□□□□□ -0.25
COL6A2-204ENST00000409416 CD68P34810 354 aaPredicted RBP13.48□□□□□ -0.25
COL6A2-204ENST00000409416 GLUD2P49448 558 aa13.48□□□□□ -0.25
COL6A2-204ENST00000409416 HARS2P49590 506 aaKnown RBP13.48□□□□□ -0.25
COL6A2-204ENST00000409416 PPP1R3AQ16821 1122 aa13.48□□□□□ -0.25
COL6A2-204ENST00000409416 FBXL19Q6PCT2 694 aa13.48□□□□□ -0.25
COL6A2-204ENST00000409416 C16orf89Q6UX73 402 aa13.48□□□□□ -0.25
COL6A2-204ENST00000409416 EME1Q96AY2 570 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms