RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 MMP3P08254 477 aa10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 FCGR1AP12314 374 aa10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 IMPDH1P20839 514 aa10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 DNAJB1P25685 340 aa10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 IL12AP29459 219 aa10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 PKLRP30613 574 aa10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 CAPGP40121 348 aa10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 MAGEA12P43365 314 aa10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 ARCN1P48444 511 aaKnown RBP10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 P2RX3P56373 397 aa10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 CLDN10P78369 228 aa10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 MRPS9P82933 396 aaKnown RBP10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 STX5Q13190 355 aa10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 SHHQ15465 462 aa10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 ATP6AP1Q15904 470 aa10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 PUS10Q3MIT2 529 aaKnown RBP10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 ZNF484Q5JVG2 852 aa10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 RBM48Q5RL73 367 aaKnown RBP10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 N4BP2L1Q5TBK1 243 aaPredicted RBP10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 BROXQ5VW32 411 aa10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 ZNF598Q86UK7 904 aaKnown RBP10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 VSIG10LQ86VR7 867 aa10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 MFSD4AQ8N468 514 aa10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 RDH13Q8NBN7 331 aa10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 GRPEL2Q8TAA5 225 aa10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 MARVELD3Q96A59 401 aa10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 FKBP10Q96AY3 582 aa10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 UBXN10Q96LJ8 280 aa10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 HERC2P3Q9BVR0 1158 aa10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 FTHL17Q9BXU8 183 aa10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 CLPBQ9H078 707 aa10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 ATP13A3Q9H7F0 1226 aa10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 NEK6Q9HC98 313 aa10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 SMYD2Q9NRG4 433 aa10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 TRMT13Q9NUP7 481 aaKnown RBP10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 ADAM28Q9UKQ2 775 aa10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 PCDHA11Q9Y5I1 949 aa10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 TRIP12Q14669 1992 aaPredicted RBP10.72□□□□□ -0.69
NIF3L1-204ENST00000409357 TCAF2A6NFQ2 919 aa10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 SAGE2PA6NJ88 616 aa10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 KPNA7A9QM74 516 aa10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 TMX2-CTNND1H3BSU7 103 aa10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 TEX28O15482 410 aa10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 HOXC11O43248 304 aaPredicted RBP10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 PRKCGP05129 697 aa10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 CSH1P0DML2 217 aa10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 CSH2P0DML3 217 aa10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 PRKCAP17252 672 aa10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 MATN1P21941 496 aa10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 EEF1DP29692 281 aaKnown RBP10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 S100A5P33763 92 aa10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 GJC1P36383 396 aa10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 DPP6P42658 865 aa10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 CPT1AP50416 773 aa10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 MLLT10P55197 1068 aa10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 RPL10AP62906 217 aaKnown RBP10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 ZNF252P-AS1Q0IIN9 211 aa10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 SLC10A2Q12908 348 aaPredicted RBP10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 NFE2Q16621 373 aaPredicted RBP10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 ATP13A4Q4VNC1 1196 aa10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 MTX3Q5HYI7 312 aa10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 TMTC4Q5T4D3 741 aa10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 ERAP2Q6P179 960 aa10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 B3GNT9Q6UX72 402 aa10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 RFPL4BQ6ZWI9 263 aa10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 LINC00523Q86TU6 105 aa10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 UNC45BQ8IWX7 931 aa10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 DAW1Q8N136 415 aa10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 LSMEM1Q8N8F7 131 aa10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 CMASQ8NFW8 434 aaPredicted RBP10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 RDH11Q8TC12 318 aa10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 PHF10Q8WUB8 498 aaKnown RBP10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 RCN3Q96D15 328 aa10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 EBNA1BP2Q99848 306 aaKnown RBP10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 TBC1D14Q9P2M4 693 aa10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 RABL2BQ9UNT1 228 aa10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 USTQ9Y2C2 406 aa10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 WBP11Q9Y2W2 641 aaKnown RBP10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 VWA7Q9Y334 891 aa10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 RAP2CQ9Y3L5 183 aa10.71□□□□□ -0.69
NIF3L1-204ENST00000409357 CNTNAP2Q9UHC6 1331 aa10.71□□□□□ -0.7
NIF3L1-204ENST00000409357 TET1Q8NFU7 2136 aa10.71□□□□□ -0.7
NIF3L1-204ENST00000409357 IGLV3-22A0A075B6J6 115 aa10.7□□□□□ -0.7
NIF3L1-204ENST00000409357 HEATR9A2RTY3 570 aa10.7□□□□□ -0.7
NIF3L1-204ENST00000409357 FAM86B1E9PN63 330 aa10.7□□□□□ -0.7
NIF3L1-204ENST00000409357 PHGDHO43175 533 aaKnown RBP10.7□□□□□ -0.7
NIF3L1-204ENST00000409357 CST8O60676 142 aa10.7□□□□□ -0.7
NIF3L1-204ENST00000409357 RFPL2O75678 378 aa10.7□□□□□ -0.7
NIF3L1-204ENST00000409357 ZMPSTE24O75844 475 aa10.7□□□□□ -0.7
NIF3L1-204ENST00000409357 PIAS1O75925 651 aa10.7□□□□□ -0.7
NIF3L1-204ENST00000409357 GSNP06396 782 aa10.7□□□□□ -0.7
NIF3L1-204ENST00000409357 APOA4P06727 396 aa10.7□□□□□ -0.7
NIF3L1-204ENST00000409357 FAM86B2P0C5J1 330 aa10.7□□□□□ -0.7
NIF3L1-204ENST00000409357 ZNF286BP0CG31 522 aa10.7□□□□□ -0.7
NIF3L1-204ENST00000409357 ITIH1P19827 911 aa10.7□□□□□ -0.7
NIF3L1-204ENST00000409357 TPSB2P20231 275 aa10.7□□□□□ -0.7
NIF3L1-204ENST00000409357 ACO1P21399 889 aaKnown RBP10.7□□□□□ -0.7
NIF3L1-204ENST00000409357 UBA1P22314 1058 aaKnown RBP10.7□□□□□ -0.7
NIF3L1-204ENST00000409357 CYP2C18P33260 490 aa10.7□□□□□ -0.7
NIF3L1-204ENST00000409357 SERPINB10P48595 397 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms