RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 PEX5P50542 639 aa16.86■□□□□ 0.29
CHMP3-203ENST00000409225 ATP1A2P50993 1020 aa16.86■□□□□ 0.29
CHMP3-203ENST00000409225 SNRPD1P62314 119 aaKnown RBP16.86■□□□□ 0.29
CHMP3-203ENST00000409225 SERINC3Q13530 473 aa16.86■□□□□ 0.29
CHMP3-203ENST00000409225 NFATC4Q14934 902 aa16.86■□□□□ 0.29
CHMP3-203ENST00000409225 NCAPHQ15003 741 aa16.86■□□□□ 0.29
CHMP3-203ENST00000409225 LRRC14Q15048 493 aa16.86■□□□□ 0.29
CHMP3-203ENST00000409225 MYLK3Q32MK0 819 aa16.86■□□□□ 0.29
CHMP3-203ENST00000409225 MAP9Q49MG5 647 aa16.86■□□□□ 0.29
CHMP3-203ENST00000409225 CERCAMQ5T4B2 595 aa16.86■□□□□ 0.29
CHMP3-203ENST00000409225 KCTD16Q68DU8 428 aa16.86■□□□□ 0.29
CHMP3-203ENST00000409225 GDPD4Q6W3E5 623 aa16.86■□□□□ 0.29
CHMP3-203ENST00000409225 FAM26EQ8N5C1 309 aa16.86■□□□□ 0.29
CHMP3-203ENST00000409225 ARHGEF2Q92974 986 aaKnown RBP16.86■□□□□ 0.29
CHMP3-203ENST00000409225 SMARCE1Q969G3 411 aa16.86■□□□□ 0.29
CHMP3-203ENST00000409225 PSMG3-AS1Q96PY0 264 aa16.86■□□□□ 0.29
CHMP3-203ENST00000409225 OSBPL1AQ9BXW6 950 aa16.86■□□□□ 0.29
CHMP3-203ENST00000409225 LRIT1Q9P2V4 623 aa16.86■□□□□ 0.29
CHMP3-203ENST00000409225 PCDHGC3Q9UN70 934 aa16.86■□□□□ 0.29
CHMP3-203ENST00000409225 OR1A2Q9Y585 309 aa16.86■□□□□ 0.29
CHMP3-203ENST00000409225 USP9YO00507 2555 aaPredicted RBP16.86■□□□□ 0.29
CHMP3-203ENST00000409225 DOCK4Q8N1I0 1966 aa16.86■□□□□ 0.29
CHMP3-203ENST00000409225 SPTAN1Q13813 2472 aaKnown RBP16.86■□□□□ 0.29
CHMP3-203ENST00000409225 B4DGG1 531 aa16.85■□□□□ 0.29
CHMP3-203ENST00000409225 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.85■□□□□ 0.29
CHMP3-203ENST00000409225 F9P00740 461 aa16.85■□□□□ 0.29
CHMP3-203ENST00000409225 TNFP01375 233 aa16.85■□□□□ 0.29
CHMP3-203ENST00000409225 CD44P16070 742 aaKnown RBP16.85■□□□□ 0.29
CHMP3-203ENST00000409225 SNX16P57768 344 aa16.85■□□□□ 0.29
CHMP3-203ENST00000409225 ARHGEF7Q14155 803 aa16.85■□□□□ 0.29
CHMP3-203ENST00000409225 WSCD2Q2TBF2 565 aa16.85■□□□□ 0.29
CHMP3-203ENST00000409225 ACBD5Q5T8D3 534 aaPredicted RBP16.85■□□□□ 0.29
CHMP3-203ENST00000409225 KLHL10Q6JEL2 608 aa16.85■□□□□ 0.29
CHMP3-203ENST00000409225 ENOSF1Q7L5Y1 443 aa16.85■□□□□ 0.29
CHMP3-203ENST00000409225 TAF8Q7Z7C8 310 aa16.85■□□□□ 0.29
CHMP3-203ENST00000409225 TRIM59Q8IWR1 403 aa16.85■□□□□ 0.29
CHMP3-203ENST00000409225 FAM46DQ8NEK8 389 aa16.85■□□□□ 0.29
CHMP3-203ENST00000409225 NT5C3BQ969T7 300 aa16.85■□□□□ 0.29
CHMP3-203ENST00000409225 PGAP3Q96FM1 320 aaPredicted RBP16.85■□□□□ 0.29
CHMP3-203ENST00000409225 PDXPQ96GD0 296 aa16.85■□□□□ 0.29
CHMP3-203ENST00000409225 DHTKD1Q96HY7 919 aaPredicted RBP16.85■□□□□ 0.29
CHMP3-203ENST00000409225 APOOQ9BUR5 198 aa16.85■□□□□ 0.29
CHMP3-203ENST00000409225 PLCB1Q9NQ66 1216 aa16.85■□□□□ 0.29
CHMP3-203ENST00000409225 ZNF71Q9NQZ8 489 aaPredicted RBP16.85■□□□□ 0.29
CHMP3-203ENST00000409225 AKAP7Q9P0M2 348 aaPredicted RBP16.85■□□□□ 0.29
CHMP3-203ENST00000409225 ANAPC2Q9UJX6 822 aa16.85■□□□□ 0.29
CHMP3-203ENST00000409225 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.85■□□□□ 0.29
CHMP3-203ENST00000409225 LRP4O75096 1905 aa16.85■□□□□ 0.29
CHMP3-203ENST00000409225 SDK2Q58EX2 2172 aa16.85■□□□□ 0.29
CHMP3-203ENST00000409225 CHD5Q8TDI0 1954 aa16.84■□□□□ 0.29
CHMP3-203ENST00000409225 FAM170AA1A519 330 aa16.84■□□□□ 0.29
CHMP3-203ENST00000409225 LIFP15018 202 aa16.84■□□□□ 0.29
CHMP3-203ENST00000409225 TIMP2P16035 220 aa16.84■□□□□ 0.29
CHMP3-203ENST00000409225 PNLIPP16233 465 aa16.84■□□□□ 0.29
CHMP3-203ENST00000409225 CCR10P46092 362 aa16.84■□□□□ 0.29
CHMP3-203ENST00000409225 INPP5AQ14642 412 aa16.84■□□□□ 0.29
CHMP3-203ENST00000409225 C14orf28Q4W4Y0 310 aa16.84■□□□□ 0.29
CHMP3-203ENST00000409225 TTI2Q6NXR4 508 aa16.84■□□□□ 0.29
CHMP3-203ENST00000409225 IL22RA1Q8N6P7 574 aa16.84■□□□□ 0.29
CHMP3-203ENST00000409225 ATL2Q8NHH9 583 aa16.84■□□□□ 0.29
CHMP3-203ENST00000409225 NKD1Q969G9 470 aa16.84■□□□□ 0.29
CHMP3-203ENST00000409225 PMEPA1Q969W9 287 aa16.84■□□□□ 0.29
CHMP3-203ENST00000409225 WDR92Q96MX6 357 aa16.84■□□□□ 0.29
CHMP3-203ENST00000409225 HAPLN3Q96S86 360 aa16.84■□□□□ 0.29
CHMP3-203ENST00000409225 RBM15Q96T37 977 aaKnown RBP eCLIP16.84■□□□□ 0.29
CHMP3-203ENST00000409225 CRACR2AQ9BSW2 395 aa16.84■□□□□ 0.29
CHMP3-203ENST00000409225 B3GNT4Q9C0J1 378 aa16.84■□□□□ 0.29
CHMP3-203ENST00000409225 SCAND2PQ9GZW5 306 aaPredicted RBP16.84■□□□□ 0.29
CHMP3-203ENST00000409225 RDH14Q9HBH5 336 aa16.84■□□□□ 0.29
CHMP3-203ENST00000409225 GDPD2Q9HCC8 539 aa16.84■□□□□ 0.29
CHMP3-203ENST00000409225 NDFIP2Q9NV92 336 aa16.84■□□□□ 0.29
CHMP3-203ENST00000409225 TUBD1Q9UJT1 453 aa16.84■□□□□ 0.29
CHMP3-203ENST00000409225 PLAAQ9Y263 795 aa16.84■□□□□ 0.29
CHMP3-203ENST00000409225 PCCBP05166 539 aa16.83■□□□□ 0.28
CHMP3-203ENST00000409225 XPAP23025 273 aaPredicted RBP16.83■□□□□ 0.28
CHMP3-203ENST00000409225 KRT9P35527 623 aa16.83■□□□□ 0.28
CHMP3-203ENST00000409225 ETFBP38117 255 aa16.83■□□□□ 0.28
CHMP3-203ENST00000409225 GEMIN4P57678 1058 aaKnown RBP16.83■□□□□ 0.28
CHMP3-203ENST00000409225 APBA1Q02410 837 aa16.83■□□□□ 0.28
CHMP3-203ENST00000409225 NOTCH2Q04721 2471 aa16.83■□□□□ 0.28
CHMP3-203ENST00000409225 HLTFQ14527 1009 aaKnown RBP eCLIP16.83■□□□□ 0.28
CHMP3-203ENST00000409225 SLC25A52Q3SY17 297 aa16.83■□□□□ 0.28
CHMP3-203ENST00000409225 AMZ1Q400G9 498 aa16.83■□□□□ 0.28
CHMP3-203ENST00000409225 EFHC2Q5JST6 749 aa16.83■□□□□ 0.28
CHMP3-203ENST00000409225 HIST2H2BCQ6DN03 193 aa16.83■□□□□ 0.28
CHMP3-203ENST00000409225 OGFOD3Q6PK18 319 aa16.83■□□□□ 0.28
CHMP3-203ENST00000409225 FAM131BQ86XD5 332 aa16.83■□□□□ 0.28
CHMP3-203ENST00000409225 ZDHHC17Q8IUH5 632 aa16.83■□□□□ 0.28
CHMP3-203ENST00000409225 FMR1NBQ8N0W7 255 aaPredicted RBP16.83■□□□□ 0.28
CHMP3-203ENST00000409225 NETO2Q8NC67 525 aa16.83■□□□□ 0.28
CHMP3-203ENST00000409225 RCBTB1Q8NDN9 531 aa16.83■□□□□ 0.28
CHMP3-203ENST00000409225 C9orf43Q8TAL5 461 aaPredicted RBP16.83■□□□□ 0.28
CHMP3-203ENST00000409225 SPATA20Q8TB22 786 aa16.83■□□□□ 0.28
CHMP3-203ENST00000409225 USP9XQ93008 2570 aaPredicted RBP16.83■□□□□ 0.28
CHMP3-203ENST00000409225 PPARGC1AQ9UBK2 798 aaKnown RBP16.83■□□□□ 0.28
CHMP3-203ENST00000409225 DNAI1Q9UI46 699 aa16.83■□□□□ 0.28
CHMP3-203ENST00000409225 ZDHHC9Q9Y397 364 aa16.83■□□□□ 0.28
CHMP3-203ENST00000409225 MYO9AB2RTY4 2548 aa16.83■□□□□ 0.28
CHMP3-203ENST00000409225 LRRK1Q38SD2 2015 aa16.82■□□□□ 0.28
CHMP3-203ENST00000409225 ARSDP51689 593 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms