RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 PTPN9P43378 593 aa9.29□□□□□ -0.92
NIF3L1-203ENST00000409129 UCNP55089 124 aa9.29□□□□□ -0.92
NIF3L1-203ENST00000409129 FMO1Q01740 532 aa9.29□□□□□ -0.92
NIF3L1-203ENST00000409129 NR0B2Q15466 257 aa9.29□□□□□ -0.92
NIF3L1-203ENST00000409129 DEFB133Q30KQ1 61 aa9.29□□□□□ -0.92
NIF3L1-203ENST00000409129 CT47A1Q5JQC4 288 aaPredicted RBP9.29□□□□□ -0.92
NIF3L1-203ENST00000409129 BROXQ5VW32 411 aa9.29□□□□□ -0.92
NIF3L1-203ENST00000409129 GUSBP11Q6P575 273 aa9.29□□□□□ -0.92
NIF3L1-203ENST00000409129 GDPD4Q6W3E5 623 aa9.29□□□□□ -0.92
NIF3L1-203ENST00000409129 LEKR1Q6ZMV7 388 aa9.29□□□□□ -0.92
NIF3L1-203ENST00000409129 EFL1Q7Z2Z2 1120 aaKnown RBP9.29□□□□□ -0.92
NIF3L1-203ENST00000409129 TTC7BQ86TV6 843 aa9.29□□□□□ -0.92
NIF3L1-203ENST00000409129 EXD3Q8N9H8 876 aa9.29□□□□□ -0.92
NIF3L1-203ENST00000409129 TPCN2Q8NHX9 752 aa9.29□□□□□ -0.92
NIF3L1-203ENST00000409129 JOSD2Q8TAC2 188 aa9.29□□□□□ -0.92
NIF3L1-203ENST00000409129 SLC30A5Q8TAD4 765 aa9.29□□□□□ -0.92
NIF3L1-203ENST00000409129 GPT2Q8TD30 523 aa9.29□□□□□ -0.92
NIF3L1-203ENST00000409129 CENPIQ92674 756 aaPredicted RBP9.29□□□□□ -0.92
NIF3L1-203ENST00000409129 GRAMD1AQ96CP6 724 aa9.29□□□□□ -0.92
NIF3L1-203ENST00000409129 TBC1D31Q96DN5 1066 aa9.29□□□□□ -0.92
NIF3L1-203ENST00000409129 ARHGEF26Q96DR7 871 aa9.29□□□□□ -0.92
NIF3L1-203ENST00000409129 DPH1Q9BZG8 443 aa9.29□□□□□ -0.92
NIF3L1-203ENST00000409129 GANQ9H2C0 597 aa9.29□□□□□ -0.92
NIF3L1-203ENST00000409129 TAB2Q9NYJ8 693 aa9.29□□□□□ -0.92
NIF3L1-203ENST00000409129 SPASTQ9UBP0 616 aa9.29□□□□□ -0.92
NIF3L1-203ENST00000409129 NEU3Q9UQ49 428 aa9.29□□□□□ -0.92
NIF3L1-203ENST00000409129 ITM2BQ9Y287 266 aa9.29□□□□□ -0.92
NIF3L1-203ENST00000409129 DOCK4Q8N1I0 1966 aa9.29□□□□□ -0.92
NIF3L1-203ENST00000409129 TRPM6Q9BX84 2022 aa9.29□□□□□ -0.92
NIF3L1-203ENST00000409129 ITPR2Q14571 2701 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 ZSCAN5CA6NGD5 496 aaPredicted RBP9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 TOR1BO14657 336 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 BUB1O43683 1085 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 MMP20O60882 483 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 GCATO75600 419 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 KRT38O76015 456 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 GJB6O95452 261 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 KRT3P12035 628 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 GP1BBP13224 206 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 RFC1P35251 1148 aaPredicted RBP9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 SOX5P35711 763 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 RPIAP49247 311 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 THOP1P52888 689 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 ADKP55263 362 aaKnown RBP9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 HDAC4P56524 1084 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 JAM2P57087 298 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 POLR2FP61218 127 aaKnown RBP9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 YPEL5P62699 121 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 RAD51Q06609 339 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 VAC14Q08AM6 782 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 PTP4A2Q12974 167 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 C1orf61Q13536 156 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 INO80DQ53TQ3 878 aaPredicted RBP9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 PRRT3Q5FWE3 981 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 ATXN7L2Q5T6C5 722 aaPredicted RBP9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 IGF2-ASQ6U949 168 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 TRIM72Q6ZMU5 477 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 SLFN11Q7Z7L1 901 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 VPS36Q86VN1 386 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 RBFAQ8N0V3 343 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 CCDC185Q8N715 623 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 CXorf40AQ8TE69 158 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 FAM172AQ8WUF8 416 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 KCNE4Q8WWG9 221 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 CASKIN2Q8WXE0 1202 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 GLMNQ92990 594 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 NTAN1Q96AB6 310 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 ATXN7L3BQ96GX2 97 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 VCPIP1Q96JH7 1222 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 TBATAQ96M53 351 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 GDAP1L1Q96MZ0 367 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 SLC46A1Q96NT5 459 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 C11orf70Q9BRQ4 267 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 BOCQ9BWV1 1114 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 C1QTNF7Q9BXJ2 289 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 TTYH3Q9C0H2 523 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 VPS16Q9H269 839 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 TCEAL2Q9H3H9 227 aaPredicted RBP9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 ASCL3Q9NQ33 180 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 THSD1Q9NS62 852 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 APOBEC3BQ9UH17 382 aaKnown RBP9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 PNMA8BQ9ULN7 279 aaPredicted RBP9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 SATB2Q9UPW6 733 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 MFHAS1Q9Y4C4 1052 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 HEMK1Q9Y5R4 338 aaPredicted RBP9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 RP1P56715 2156 aa9.28□□□□□ -0.92
NIF3L1-203ENST00000409129 A0A1W2PNU3 283 aaPredicted RBP9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 LMO7DNF2Z398 122 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 MUSKO15146 869 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 YY2O15391 372 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 TCEA3O75764 348 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 TM7SF2O76062 418 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 TMCC1O94876 653 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 IGSF6O95976 241 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 ANXA6P08133 673 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 UNGP13051 313 aaPredicted RBP9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 TIMP2P16035 220 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 ITIH2P19823 946 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 GPD1P21695 349 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 RBMS1P29558 406 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms