RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 UBASH3AP57075 661 aa12.98□□□□□ -0.33
SNORD88B-201ENST00000408454 ERVPABLB-1P60509 514 aa12.98□□□□□ -0.33
SNORD88B-201ENST00000408454 ZBED6P86452 979 aa12.98□□□□□ -0.33
SNORD88B-201ENST00000408454 TARDBPQ13148 414 aaKnown RBP eCLIP12.98□□□□□ -0.33
SNORD88B-201ENST00000408454 DNAJC3Q13217 504 aa12.98□□□□□ -0.33
SNORD88B-201ENST00000408454 EIF3IQ13347 325 aaKnown RBP12.98□□□□□ -0.33
SNORD88B-201ENST00000408454 ODF2Q5BJF6 829 aa12.98□□□□□ -0.33
SNORD88B-201ENST00000408454 FAM72AQ5TYM5 149 aa12.98□□□□□ -0.33
SNORD88B-201ENST00000408454 FAM72DQ6L9T8 149 aa12.98□□□□□ -0.33
SNORD88B-201ENST00000408454 FAM72BQ86X60 149 aa12.98□□□□□ -0.33
SNORD88B-201ENST00000408454 ATPAF2Q8N5M1 289 aa12.98□□□□□ -0.33
SNORD88B-201ENST00000408454 OR6K2Q8NGY2 324 aa12.98□□□□□ -0.33
SNORD88B-201ENST00000408454 FGF11Q92914 225 aa12.98□□□□□ -0.33
SNORD88B-201ENST00000408454 APOLD1Q96LR9 279 aa12.98□□□□□ -0.33
SNORD88B-201ENST00000408454 ZNF830Q96NB3 372 aaPredicted RBP12.98□□□□□ -0.33
SNORD88B-201ENST00000408454 PSKH2Q96QS6 385 aa12.98□□□□□ -0.33
SNORD88B-201ENST00000408454 LRRC19Q9H756 370 aa12.98□□□□□ -0.33
SNORD88B-201ENST00000408454 FZD3Q9NPG1 666 aa12.98□□□□□ -0.33
SNORD88B-201ENST00000408454 AMACRQ9UHK6 382 aa12.98□□□□□ -0.33
SNORD88B-201ENST00000408454 DOCK4Q8N1I0 1966 aa12.98□□□□□ -0.33
SNORD88B-201ENST00000408454 NUMA1Q14980 2115 aa12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 K7ESM1 405 aa12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 DFFAO00273 331 aa12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 WNT9AO14904 365 aa12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 ERCC2P18074 760 aa12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 RBMS1P29558 406 aaKnown RBP12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 PCBP4P57723 403 aaKnown RBP12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 CLDN2P57739 230 aa12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 FZD2Q14332 565 aa12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 KRT81Q14533 505 aa12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 DPYSL2Q16555 572 aa12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 ATXN7L2Q5T6C5 722 aaPredicted RBP12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 RBM44Q6ZP01 1051 aaKnown RBP12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 USP45Q70EL2 814 aa12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 APTXQ7Z2E3 356 aaKnown RBP12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 SRLQ86TD4 932 aa12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 RAVER1Q8IY67 606 aaKnown RBP12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 PHACTR4Q8IZ21 702 aa12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 SLC25A45Q8N413 288 aa12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 LSM14AQ8ND56 463 aaKnown RBP12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 ZNF248Q8NDW4 579 aa12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 SNIP1Q8TAD8 396 aaKnown RBP12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 MDM1Q8TC05 714 aa12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 KIAA1524Q8TCG1 905 aa12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 LMX1AQ8TE12 382 aa12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 CTNNBL1Q8WYA6 563 aaPredicted RBP12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 SPOCK2Q92563 424 aa12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 TMEM159Q96B96 161 aa12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 BMFQ96LC9 184 aa12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 SNRNP25Q9BV90 132 aaKnown RBP12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 STRADBQ9C0K7 418 aa12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 ISCUQ9H1K1 167 aa12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 DEF6Q9H4E7 631 aa12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 NDFIP2Q9NV92 336 aa12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 AKAP7Q9P0M2 348 aaPredicted RBP12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 GPSM3Q9Y4H4 160 aa12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 KMT2BQ9UMN6 2715 aaPredicted RBP12.97□□□□□ -0.33
SNORD88B-201ENST00000408454 POM121BA6NF01 834 aa12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 PSMD11O00231 422 aa12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 TNFRSF10CO14798 259 aa12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 OPA1O60313 960 aa12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 CD160O95971 181 aa12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 TNFP01375 233 aa12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 KRT7P08729 469 aa12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 HOXC4P09017 264 aaPredicted RBP12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 MX2P20592 715 aa12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 MIPP30301 263 aa12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 EIF4A3P38919 411 aaKnown RBP12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 ABL2P42684 1182 aa12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 PAPOLAP51003 745 aaKnown RBP12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 BIRC2Q13490 618 aa12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 CAMK2BQ13554 666 aa12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 ARHGEF7Q14155 803 aa12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 LBRQ14739 615 aaKnown RBP12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 NFATC4Q14934 902 aa12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 NFKBIBQ15653 356 aa12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 PRRT3Q5FWE3 981 aa12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 CCDC122Q5T0U0 273 aa12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 C6orf132Q5T0Z8 1188 aa12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 MARC1Q5VT66 337 aa12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 ARL14Q8N4G2 192 aa12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 ARL10Q8N8L6 244 aa12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 NIPA2Q8N8Q9 360 aa12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 IFI44Q8TCB0 444 aa12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 CENPTQ96BT3 561 aa12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 WDR92Q96MX6 357 aa12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 KLF6Q99612 283 aaPredicted RBP12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 TMEM63CQ9P1W3 806 aa12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 UVRAGQ9P2Y5 699 aa12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 MYO1AQ9UBC5 1043 aa12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 KLQ9UEF7 1012 aa12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 PCSK1NQ9UHG2 260 aa12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 NEU3Q9UQ49 428 aa12.96□□□□□ -0.33
SNORD88B-201ENST00000408454 TMEM131Q92545 1883 aa12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 EME2A4GXA9 379 aaPredicted RBP12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 TRIM38O00635 465 aa12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 MMP20O60882 483 aa12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 LRCH4O75427 683 aa12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 DXOO77932 396 aaKnown RBP12.95□□□□□ -0.34
SNORD88B-201ENST00000408454 GJB6O95452 261 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms