RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 HNRNPKP61978 463 aaKnown RBP eCLIP19.47■□□□□ 0.714e-10■■■■□ 21
SMARCB1-204ENST00000407422 SEMG2Q02383 582 aa19.47■□□□□ 0.71
SMARCB1-204ENST00000407422 DPYSL2Q16555 572 aa19.47■□□□□ 0.71
SMARCB1-204ENST00000407422 UGP2Q16851 508 aa19.47■□□□□ 0.71
SMARCB1-204ENST00000407422 HSPH1Q92598 858 aa19.47■□□□□ 0.71
SMARCB1-204ENST00000407422 SP110Q9HB58 689 aa19.47■□□□□ 0.71
SMARCB1-204ENST00000407422 PCDH12Q9NPG4 1184 aa19.47■□□□□ 0.71
SMARCB1-204ENST00000407422 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.47■□□□□ 0.71
SMARCB1-204ENST00000407422 ETNK2Q9NVF9 386 aa19.47■□□□□ 0.71
SMARCB1-204ENST00000407422 COQ6Q9Y2Z9 468 aa19.47■□□□□ 0.71
SMARCB1-204ENST00000407422 LUC7L2Q9Y383 392 aaKnown RBP19.47■□□□□ 0.71
SMARCB1-204ENST00000407422 TSPAN11A1L157 253 aa19.47■□□□□ 0.71
SMARCB1-204ENST00000407422 SCAMP1O15126 338 aa19.47■□□□□ 0.71
SMARCB1-204ENST00000407422 MUSKO15146 869 aa19.47■□□□□ 0.71
SMARCB1-204ENST00000407422 PRKCGP05129 697 aa19.47■□□□□ 0.71
SMARCB1-204ENST00000407422 AMPD1P23109 780 aa19.47■□□□□ 0.71
SMARCB1-204ENST00000407422 DAB2P98082 770 aa19.47■□□□□ 0.71
SMARCB1-204ENST00000407422 EIF2B5Q13144 721 aaKnown RBP19.47■□□□□ 0.71
SMARCB1-204ENST00000407422 ILKQ13418 452 aa19.47■□□□□ 0.71
SMARCB1-204ENST00000407422 ACAP1Q15027 740 aa19.47■□□□□ 0.71
SMARCB1-204ENST00000407422 NFKBIBQ15653 356 aa19.47■□□□□ 0.71
SMARCB1-204ENST00000407422 TMEM52BQ4KMG9 183 aa19.47■□□□□ 0.71
SMARCB1-204ENST00000407422 POLNQ7Z5Q5 900 aa19.47■□□□□ 0.71
SMARCB1-204ENST00000407422 SRLQ86TD4 932 aa19.47■□□□□ 0.71
SMARCB1-204ENST00000407422 PDCD7Q8N8D1 485 aaKnown RBP19.47■□□□□ 0.71
SMARCB1-204ENST00000407422 TP53I13Q8NBR0 393 aaPredicted RBP19.47■□□□□ 0.71
SMARCB1-204ENST00000407422 ZNF548Q8NEK5 533 aaPredicted RBP19.47■□□□□ 0.71
SMARCB1-204ENST00000407422 ZNF641Q96N77 438 aaPredicted RBP19.47■□□□□ 0.71
SMARCB1-204ENST00000407422 NLGN3Q9NZ94 848 aa19.47■□□□□ 0.71
SMARCB1-204ENST00000407422 PNMA8BQ9ULN7 279 aaPredicted RBP19.47■□□□□ 0.71
SMARCB1-204ENST00000407422 K7ESM1 405 aa19.46■□□□□ 0.71
SMARCB1-204ENST00000407422 RARAP10276 462 aa19.46■□□□□ 0.71
SMARCB1-204ENST00000407422 HNF1BP35680 557 aa19.46■□□□□ 0.71
SMARCB1-204ENST00000407422 ZNF135P52742 658 aaPredicted RBP19.46■□□□□ 0.71
SMARCB1-204ENST00000407422 IL10RBQ08334 325 aa19.46■□□□□ 0.71
SMARCB1-204ENST00000407422 TARDBPQ13148 414 aaKnown RBP eCLIP19.46■□□□□ 0.71
SMARCB1-204ENST00000407422 PIGHQ14442 188 aaPredicted RBP19.46■□□□□ 0.71
SMARCB1-204ENST00000407422 GRM3Q14832 879 aa19.46■□□□□ 0.71
SMARCB1-204ENST00000407422 BOLA3Q53S33 107 aa19.46■□□□□ 0.71
SMARCB1-204ENST00000407422 HS1BP3Q53T59 392 aa19.46■□□□□ 0.71
SMARCB1-204ENST00000407422 HCAR2Q8TDS4 363 aa19.46■□□□□ 0.71
SMARCB1-204ENST00000407422 APOLD1Q96LR9 279 aa19.46■□□□□ 0.71
SMARCB1-204ENST00000407422 NSMCE3Q96MG7 304 aa19.46■□□□□ 0.71
SMARCB1-204ENST00000407422 NUP85Q9BW27 656 aa19.46■□□□□ 0.71
SMARCB1-204ENST00000407422 CINPQ9BW66 212 aaPredicted RBP19.46■□□□□ 0.71
SMARCB1-204ENST00000407422 TCEAL2Q9H3H9 227 aaPredicted RBP19.46■□□□□ 0.71
SMARCB1-204ENST00000407422 ANAPC7Q9UJX3 599 aa19.46■□□□□ 0.71
SMARCB1-204ENST00000407422 RAXQ9Y2V3 346 aa19.46■□□□□ 0.71
SMARCB1-204ENST00000407422 LY6G6EA0A0G2JKS1 128 aa19.45■□□□□ 0.7
SMARCB1-204ENST00000407422 NEMP2A6NFY4 417 aa19.45■□□□□ 0.7
SMARCB1-204ENST00000407422 H3BRJ5 948 aa19.45■□□□□ 0.7
SMARCB1-204ENST00000407422 RIOK3O14730 519 aaKnown RBP19.45■□□□□ 0.7
SMARCB1-204ENST00000407422 CYP1A2P05177 515 aa19.45■□□□□ 0.7
SMARCB1-204ENST00000407422 JUNDP17535 347 aa19.45■□□□□ 0.7
SMARCB1-204ENST00000407422 CASP14P31944 242 aa19.45■□□□□ 0.7
SMARCB1-204ENST00000407422 CSNK1DP48730 415 aa19.45■□□□□ 0.7
SMARCB1-204ENST00000407422 SUOXP51687 545 aa19.45■□□□□ 0.7
SMARCB1-204ENST00000407422 INSM1Q01101 510 aaPredicted RBP19.45■□□□□ 0.7
SMARCB1-204ENST00000407422 ELP6Q0PNE2 266 aa19.45■□□□□ 0.7
SMARCB1-204ENST00000407422 IRF4Q15306 451 aa19.45■□□□□ 0.7
SMARCB1-204ENST00000407422 CFAP58Q5T655 872 aa19.45■□□□□ 0.7
SMARCB1-204ENST00000407422 BRAT1Q6PJG6 821 aa19.45■□□□□ 0.7
SMARCB1-204ENST00000407422 RBFAQ8N0V3 343 aa19.45■□□□□ 0.7
SMARCB1-204ENST00000407422 NIPA2Q8N8Q9 360 aa19.45■□□□□ 0.7
SMARCB1-204ENST00000407422 CSPG4P5Q96PW8 444 aa19.45■□□□□ 0.7
SMARCB1-204ENST00000407422 TUBGCP5Q96RT8 1024 aa19.45■□□□□ 0.7
SMARCB1-204ENST00000407422 XPO4Q9C0E2 1151 aaKnown RBP19.45■□□□□ 0.7
SMARCB1-204ENST00000407422 DKK4Q9UBT3 224 aa19.45■□□□□ 0.7
SMARCB1-204ENST00000407422 U3KQA8 63 aa19.45■□□□□ 0.7
SMARCB1-204ENST00000407422 ADAMTS20P59510 1910 aa19.45■□□□□ 0.7
SMARCB1-204ENST00000407422 TTC24A2A3L6 582 aaPredicted RBP19.44■□□□□ 0.7
SMARCB1-204ENST00000407422 H3BM21 787 aa19.44■□□□□ 0.7
SMARCB1-204ENST00000407422 CKMT1AP12532 417 aa19.44■□□□□ 0.7
SMARCB1-204ENST00000407422 C6P13671 934 aa19.44■□□□□ 0.7
SMARCB1-204ENST00000407422 ARL4AP40617 200 aa19.44■□□□□ 0.7
SMARCB1-204ENST00000407422 THOP1P52888 689 aa19.44■□□□□ 0.7
SMARCB1-204ENST00000407422 SLC25A11Q02978 314 aaKnown RBP19.44■□□□□ 0.7
SMARCB1-204ENST00000407422 SLC10A7Q0GE19 358 aa19.44■□□□□ 0.7
SMARCB1-204ENST00000407422 CCDC122Q5T0U0 273 aa19.44■□□□□ 0.7
SMARCB1-204ENST00000407422 ALKBH5Q6P6C2 394 aaKnown RBP19.44■□□□□ 0.7
SMARCB1-204ENST00000407422 LZTR1Q8N653 840 aa19.44■□□□□ 0.7
SMARCB1-204ENST00000407422 IQCDQ96DY2 449 aa19.44■□□□□ 0.7
SMARCB1-204ENST00000407422 C1QTNF7Q9BXJ2 289 aa19.44■□□□□ 0.7
SMARCB1-204ENST00000407422 ATP13A3Q9H7F0 1226 aa19.44■□□□□ 0.7
SMARCB1-204ENST00000407422 ALPPL2P10696 532 aa19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 SERPINA4P29622 427 aa19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 MMP12P39900 470 aa19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 LIG3P49916 1009 aa19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 SCNN1BP51168 640 aa19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 NSUN2Q08J23 767 aaKnown RBP eCLIP19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 RFTN1Q14699 578 aaPredicted RBP19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 LBRQ14739 615 aaKnown RBP19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 WSCD2Q2TBF2 565 aa19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 ERAP2Q6P179 960 aa19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 TMCO3Q6UWJ1 677 aa19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 LMX1AQ8TE12 382 aa19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 PSKH2Q96QS6 385 aa19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 PCDH18Q9HCL0 1135 aa19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 IP6K2Q9UHH9 426 aa19.43■□□□□ 0.7
SMARCB1-204ENST00000407422 ATP8A1Q9Y2Q0 1164 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms