RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 ZNF548Q8NEK5 533 aaPredicted RBP6.31□□□□□ -1.4
RPA3-204ENST00000406109 NT5C3BQ969T7 300 aa6.31□□□□□ -1.4
RPA3-204ENST00000406109 ARRDC3Q96B67 414 aa6.31□□□□□ -1.4
RPA3-204ENST00000406109 CCDC97Q96F63 343 aaPredicted RBP6.31□□□□□ -1.4
RPA3-204ENST00000406109 CCNL2Q96S94 520 aaPredicted RBP6.31□□□□□ -1.4
RPA3-204ENST00000406109 CHP1Q99653 195 aa6.31□□□□□ -1.4
RPA3-204ENST00000406109 SEMA3CQ99985 751 aa6.31□□□□□ -1.4
RPA3-204ENST00000406109 FEM1AQ9BSK4 669 aa6.31□□□□□ -1.4
RPA3-204ENST00000406109 FAM117AQ9C073 453 aa6.31□□□□□ -1.4
RPA3-204ENST00000406109 ABCG4Q9H172 646 aa6.31□□□□□ -1.4
RPA3-204ENST00000406109 ISCUQ9H1K1 167 aa6.31□□□□□ -1.4
RPA3-204ENST00000406109 DEF6Q9H4E7 631 aa6.31□□□□□ -1.4
RPA3-204ENST00000406109 TMPRSS4Q9NRS4 437 aa6.31□□□□□ -1.4
RPA3-204ENST00000406109 ANKMY1Q9P2S6 941 aa6.31□□□□□ -1.4
RPA3-204ENST00000406109 CNOT8Q9UFF9 292 aaKnown RBP6.31□□□□□ -1.4
RPA3-204ENST00000406109 ATXN7L1Q9ULK2 861 aaPredicted RBP6.31□□□□□ -1.4
RPA3-204ENST00000406109 PNMA8BQ9ULN7 279 aaPredicted RBP6.31□□□□□ -1.4
RPA3-204ENST00000406109 PAXBP1Q9Y5B6 917 aa6.31□□□□□ -1.4
RPA3-204ENST00000406109 SNX10Q9Y5X0 201 aa6.31□□□□□ -1.4
RPA3-204ENST00000406109 C2CD3Q4AC94 2353 aa6.31□□□□□ -1.4
RPA3-204ENST00000406109 SDK2Q58EX2 2172 aa6.31□□□□□ -1.4
RPA3-204ENST00000406109 DOCK4Q8N1I0 1966 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 SPTY2D1-AS1A0A0U1RR47 76 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 TCRBV5S1A1TA0A578 114 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 TYW5A2RUC4 315 aaKnown RBP6.3□□□□□ -1.4
RPA3-204ENST00000406109 CPED1A4D0V7 1026 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 NEMP2A6NFY4 417 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 F5H5T6 163 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 NTN3O00634 580 aaPredicted RBP6.3□□□□□ -1.4
RPA3-204ENST00000406109 ALOX15BO15296 676 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 RAD51BO15315 384 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 AKR1B10O60218 316 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 SRGAP2O75044 1071 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 ZNF821O75541 412 aaPredicted RBP6.3□□□□□ -1.4
RPA3-204ENST00000406109 GCATO75600 419 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 TCEA3O75764 348 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 ENDOD1O94919 500 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 MOCS3O95396 460 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 CSF2P04141 144 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 ITGB2P05107 769 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 ITGA2BP08514 1039 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 FAM87AP0C7U9 286 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 ALPPL2P10696 532 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 NME1P15531 152 aaKnown RBP6.3□□□□□ -1.4
RPA3-204ENST00000406109 DESP17661 470 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 WT1P19544 449 aaPredicted RBP6.3□□□□□ -1.4
RPA3-204ENST00000406109 HNRNPA2B1P22626 353 aaKnown RBP6.3□□□□□ -1.4
RPA3-204ENST00000406109 SLC5A2P31639 672 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 GGCXP38435 758 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 DUSP3P51452 185 aaPredicted RBP6.3□□□□□ -1.4
RPA3-204ENST00000406109 IRAK1P51617 712 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 ZNF143P52747 638 aaPredicted RBP6.3□□□□□ -1.4
RPA3-204ENST00000406109 SULT2A1Q06520 285 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 MTA1Q13330 715 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 SLC12A1Q13621 1099 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 AUHQ13825 339 aaKnown RBP6.3□□□□□ -1.4
RPA3-204ENST00000406109 DEFB133Q30KQ1 61 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 RAB6CQ53S08 254 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 HS1BP3Q53T59 392 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 BRMS1LQ5PSV4 323 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 RABGAP1LQ5R372 815 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 ARTNQ5T4W7 220 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 OTUD1Q5VV17 481 aaPredicted RBP6.3□□□□□ -1.4
RPA3-204ENST00000406109 FAM46CQ5VWP2 391 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 RNF219Q5W0B1 726 aaPredicted RBP6.3□□□□□ -1.4
RPA3-204ENST00000406109 PLEKHA7Q6IQ23 1121 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 ZCCHC8Q6NZY4 707 aaKnown RBP6.3□□□□□ -1.4
RPA3-204ENST00000406109 FBXL22Q6P050 247 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 NEK5Q6P3R8 708 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 ALKBH5Q6P6C2 394 aaKnown RBP6.3□□□□□ -1.4
RPA3-204ENST00000406109 CRTC1Q6UUV9 634 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 LRRC31Q6UY01 552 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 ZNF574Q6ZN55 896 aaPredicted RBP6.3□□□□□ -1.4
RPA3-204ENST00000406109 ATG14Q6ZNE5 492 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 RBM44Q6ZP01 1051 aaKnown RBP6.3□□□□□ -1.4
RPA3-204ENST00000406109 EFL1Q7Z2Z2 1120 aaKnown RBP6.3□□□□□ -1.4
RPA3-204ENST00000406109 B3GNT8Q7Z7M8 397 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 C14orf80Q86SX3 495 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 FAM131BQ86XD5 332 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 CNGA4Q8IV77 575 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 CCAR2Q8N163 923 aaKnown RBP6.3□□□□□ -1.4
RPA3-204ENST00000406109 ARL14Q8N4G2 192 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 SH2D3CQ8N5H7 860 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 OR2A12Q8NGT7 310 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 WDR36Q8NI36 951 aaKnown RBP6.3□□□□□ -1.4
RPA3-204ENST00000406109 FAM172AQ8WUF8 416 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 OR8D1Q8WZ84 308 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 VOPP1Q96AW1 172 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 ZNF653Q96CK0 615 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 SGF29Q96ES7 293 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 TRIM11Q96F44 468 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 PGAP3Q96FM1 320 aaPredicted RBP6.3□□□□□ -1.4
RPA3-204ENST00000406109 MRFAP1L1Q96HT8 127 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 C1orf74Q96LT6 269 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 CCDC42Q96M95 316 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 RPRD1AQ96P16 312 aaPredicted RBP6.3□□□□□ -1.4
RPA3-204ENST00000406109 MCEEQ96PE7 176 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 HAPLN3Q96S86 360 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 DNAJC7Q99615 494 aa6.3□□□□□ -1.4
RPA3-204ENST00000406109 DUSP23Q9BVJ7 150 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms