RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 ZNF624Q9P2J8 865 aaPredicted RBP13.44□□□□□ -0.26
SNED1-205ENST00000405547 XPR1Q9UBH6 696 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 IGSF6O95976 241 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 COX7A2P14406 83 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 ADSLP30566 484 aaPredicted RBP13.44□□□□□ -0.26
SNED1-205ENST00000405547 ATP6V0D1P61421 351 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 STRADAQ7RTN6 431 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 FAM47BQ8NA70 645 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 RCOR3Q9P2K3 495 aaPredicted RBP13.44□□□□□ -0.26
SNED1-205ENST00000405547 STK25O00506 426 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 KPNA5O15131 536 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 SPTLC1O15269 473 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 POMCP01189 267 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 CAPN1P07384 714 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 NFKB1P19838 968 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 HOXA10P31260 410 aaPredicted RBP13.44□□□□□ -0.26
SNED1-205ENST00000405547 COL9A3Q14050 684 aaPredicted RBP13.44□□□□□ -0.26
SNED1-205ENST00000405547 CRY1Q16526 586 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 MZT2AQ6P582 158 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 PGAM4Q8N0Y7 254 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 CNTD1Q8N815 330 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 ABCB10Q9NRK6 738 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 TUBA8Q9NY65 449 aaPredicted RBP13.44□□□□□ -0.26
SNED1-205ENST00000405547 UBA1P22314 1058 aaKnown RBP13.44□□□□□ -0.26
SNED1-205ENST00000405547 PRDX6P30041 224 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 TRAP1Q12931 704 aaKnown RBP13.44□□□□□ -0.26
SNED1-205ENST00000405547 GNA13Q14344 377 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 LIN52Q52LA3 116 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 SPESP1Q6UW49 350 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 LEMD2Q8NC56 503 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 FBXO5Q9UKT4 447 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 ARFGEF2Q9Y6D5 1785 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 AZIN1O14977 448 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 OTCP00480 354 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 URODP06132 367 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 CDKN2BP42772 138 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 SLC25A52Q3SY17 297 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 MON1BQ7L1V2 547 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 KCTD4Q8WVF5 259 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 TSPAN18Q96SJ8 248 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 ATP6V1HQ9UI12 483 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 SLC12A4Q9UP95 1085 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 LMO7Q8WWI1 1683 aa13.44□□□□□ -0.26
SNED1-205ENST00000405547 PEX11AO75192 247 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 NDUFAF6Q330K2 333 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 AFTPHQ6ULP2 937 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 USP45Q70EL2 814 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 AMIGO2Q86SJ2 522 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 PHACTR4Q8IZ21 702 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 LGMNQ99538 433 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 MRPL39Q9NYK5 338 aaKnown RBP13.43□□□□□ -0.26
SNED1-205ENST00000405547 MAGEL2Q9UJ55 1249 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 SALL4Q9UJQ4 1053 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 SLC28A1O00337 649 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 PAX3P23760 479 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 KLF10Q13118 480 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 NOMO1Q15155 1222 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 CHID1Q9BWS9 393 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 PNPOQ9NVS9 261 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 MAFO75444 373 aaPredicted RBP13.43□□□□□ -0.26
SNED1-205ENST00000405547 GSTM5P46439 218 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 FCGRTP55899 365 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 LYPLAL1Q5VWZ2 237 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 MYLPFQ96A32 169 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 ZYG11BQ9C0D3 744 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 PACSIN3Q9UKS6 424 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 IPPQ9Y573 584 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 PSEN1P49768 467 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 SMIM11AP58511 58 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 CELF3Q5SZQ8 465 aaKnown RBP13.43□□□□□ -0.26
SNED1-205ENST00000405547 OFCC1Q8IZS5 231 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 LGI2Q8N0V4 545 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 LRRC52Q8N7C0 313 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 HELQQ8TDG4 1101 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 UBE2E3Q969T4 207 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 REXO5Q96IC2 774 aaKnown RBP13.43□□□□□ -0.26
SNED1-205ENST00000405547 QRFPRQ96P65 431 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 OMDQ99983 421 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 NRCAMQ92823 1304 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 SLC22A3O75751 556 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 ZNF37AP17032 561 aaPredicted RBP13.43□□□□□ -0.26
SNED1-205ENST00000405547 GUCA1AP43080 201 aaPredicted RBP13.43□□□□□ -0.26
SNED1-205ENST00000405547 NUMBP49757 651 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 PERM1Q5SV97 790 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 CCDC80Q76M96 950 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 BBS4Q96RK4 519 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 NOL11Q9H8H0 719 aaKnown RBP13.43□□□□□ -0.26
SNED1-205ENST00000405547 VPS45Q9NRW7 570 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 SH3GLB1Q9Y371 365 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 SP100P23497 879 aaPredicted RBP13.43□□□□□ -0.26
SNED1-205ENST00000405547 PRKCQQ04759 706 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 CYP1B1Q16678 543 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 OR5B17Q8NGF7 314 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 PSMA8Q8TAA3 256 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 PHF10Q8WUB8 498 aaKnown RBP13.43□□□□□ -0.26
SNED1-205ENST00000405547 CAPSLQ8WWF8 208 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 NACC2Q96BF6 587 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 SLITRK2Q9H156 845 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 RAPGEFL1Q9UHV5 662 aa13.43□□□□□ -0.26
SNED1-205ENST00000405547 HNRNPLP14866 589 aaKnown RBP eCLIP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms