RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 SMARCD1Q96GM5 515 aa15.16■□□□□ 0.02
ATG4B-206ENST00000405546 TMEM209Q96SK2 561 aa15.16■□□□□ 0.02
ATG4B-206ENST00000405546 SLC38A7Q9NVC3 462 aa15.16■□□□□ 0.02
ATG4B-206ENST00000405546 COQ6Q9Y2Z9 468 aa15.16■□□□□ 0.02
ATG4B-206ENST00000405546 ARL5CA6NH57 179 aa15.16■□□□□ 0.02
ATG4B-206ENST00000405546 CCL22O00626 93 aa15.16■□□□□ 0.02
ATG4B-206ENST00000405546 ADAM23O75077 832 aa15.16■□□□□ 0.02
ATG4B-206ENST00000405546 NFKBIAP25963 317 aa15.16■□□□□ 0.02
ATG4B-206ENST00000405546 HOXD12P35452 270 aa15.16■□□□□ 0.02
ATG4B-206ENST00000405546 THPOP40225 353 aa15.16■□□□□ 0.02
ATG4B-206ENST00000405546 MAXP61244 160 aa15.16■□□□□ 0.02
ATG4B-206ENST00000405546 RELAQ04206 551 aa15.16■□□□□ 0.02
ATG4B-206ENST00000405546 NEDD8Q15843 81 aa15.16■□□□□ 0.02
ATG4B-206ENST00000405546 TMEM53Q6P2H8 277 aa15.16■□□□□ 0.02
ATG4B-206ENST00000405546 KYQ8NBH2 561 aa15.16■□□□□ 0.02
ATG4B-206ENST00000405546 RPL10LQ96L21 214 aaKnown RBP15.16■□□□□ 0.02
ATG4B-206ENST00000405546 EPB41L1Q9H4G0 881 aa15.16■□□□□ 0.02
ATG4B-206ENST00000405546 EIF2B3Q9NR50 452 aaKnown RBP15.16■□□□□ 0.02
ATG4B-206ENST00000405546 ZCWPW2A0A1B0GU75 182 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 TTC24A2A3L6 582 aaPredicted RBP15.15■□□□□ 0.02
ATG4B-206ENST00000405546 TMEM233B4DJY2 109 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 CASQ2O14958 399 aaPredicted RBP15.15■□□□□ 0.02
ATG4B-206ENST00000405546 NCAM2O15394 837 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 F9P00740 461 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 FUCA1P04066 466 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 HNRNPLP14866 589 aaKnown RBP eCLIP15.15■□□□□ 0.02
ATG4B-206ENST00000405546 SCNN1AP37088 669 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 CSHL1Q14406 222 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 FAM110CQ1W6H9 321 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 SEL1L3Q68CR1 1132 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 OFCC1Q8IZS5 231 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 PDCD6IPQ8WUM4 868 aaKnown RBP15.15■□□□□ 0.02
ATG4B-206ENST00000405546 IL22Q9GZX6 179 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 CDH19Q9H159 772 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 GBA3Q9H227 469 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 MKS1Q9NXB0 559 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 C6orf203Q9P0P8 240 aaPredicted RBP15.15■□□□□ 0.02
ATG4B-206ENST00000405546 STK39Q9UEW8 545 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 SLC2A6Q9UGQ3 507 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 RAB26Q9ULW5 256 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 FNDC3AQ9Y2H6 1198 aaKnown RBP15.15■□□□□ 0.02
ATG4B-206ENST00000405546 ACOT9Q9Y305 439 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 TRIM17Q9Y577 477 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 TRIP12Q14669 1992 aaPredicted RBP15.15■□□□□ 0.02
ATG4B-206ENST00000405546 NEMP2A6NFY4 417 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.15■□□□□ 0.02
ATG4B-206ENST00000405546 TIPRLO75663 272 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 ATE1O95260 518 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 SLC4A1P02730 911 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 TSPAN8P19075 237 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 CD97P48960 835 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 TMED10P49755 219 aaKnown RBP15.15■□□□□ 0.02
ATG4B-206ENST00000405546 OXCT1P55809 520 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 MTA1Q13330 715 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 BTG3Q14201 252 aaPredicted RBP15.15■□□□□ 0.02
ATG4B-206ENST00000405546 TGFBIQ15582 683 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 MGAT5BQ3V5L5 792 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 FGD3Q5JSP0 725 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 ZNF470Q6ECI4 717 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 RPS27LQ71UM5 84 aaKnown RBP15.15■□□□□ 0.02
ATG4B-206ENST00000405546 ZNF467Q7Z7K2 595 aaPredicted RBP15.15■□□□□ 0.02
ATG4B-206ENST00000405546 BBS5Q8N3I7 341 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 GPR152Q8TDT2 470 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 NXNL1Q96CM4 212 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 PHF21BQ96EK2 531 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 TEKT5Q96M29 485 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 CORO1BQ9BR76 489 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 SLC39A3Q9BRY0 314 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 OSBPL6Q9BZF3 934 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 WDR41Q9HAD4 459 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 IL1RL2Q9HB29 575 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 ABI2Q9NYB9 513 aaPredicted RBP15.15■□□□□ 0.02
ATG4B-206ENST00000405546 XPR1Q9UBH6 696 aa15.15■□□□□ 0.02
ATG4B-206ENST00000405546 TNPO2O14787 897 aaKnown RBP15.14■□□□□ 0.01
ATG4B-206ENST00000405546 IL1BP01584 269 aa15.14■□□□□ 0.01
ATG4B-206ENST00000405546 AHSGP02765 367 aa15.14■□□□□ 0.01
ATG4B-206ENST00000405546 MAP2K5Q13163 448 aa15.14■□□□□ 0.01
ATG4B-206ENST00000405546 PDAP1Q13442 181 aaKnown RBP15.14■□□□□ 0.01
ATG4B-206ENST00000405546 APOFQ13790 326 aa15.14■□□□□ 0.01
ATG4B-206ENST00000405546 DQX1Q8TE96 717 aaKnown RBP15.14■□□□□ 0.01
ATG4B-206ENST00000405546 RMND5BQ96G75 393 aaPredicted RBP15.14■□□□□ 0.01
ATG4B-206ENST00000405546 ZNF696Q9H7X3 374 aa15.14■□□□□ 0.01
ATG4B-206ENST00000405546 SACM1LQ9NTJ5 587 aa15.14■□□□□ 0.01
ATG4B-206ENST00000405546 SIP14410 1827 aa15.14■□□□□ 0.01
ATG4B-206ENST00000405546 DOCK3Q8IZD9 2030 aa15.14■□□□□ 0.01
ATG4B-206ENST00000405546 MBLAC1A4D2B0 266 aaPredicted RBP15.14■□□□□ 0.01
ATG4B-206ENST00000405546 F8W810 466 aa15.14■□□□□ 0.01
ATG4B-206ENST00000405546 LSM1O15116 133 aaKnown RBP15.14■□□□□ 0.01
ATG4B-206ENST00000405546 KCNH1O95259 989 aa15.14■□□□□ 0.01
ATG4B-206ENST00000405546 MPOP05164 745 aa15.14■□□□□ 0.01
ATG4B-206ENST00000405546 NPY2RP49146 381 aa15.14■□□□□ 0.01
ATG4B-206ENST00000405546 XIAPP98170 497 aa15.14■□□□□ 0.01
ATG4B-206ENST00000405546 ITGADQ13349 1161 aa15.14■□□□□ 0.01
ATG4B-206ENST00000405546 INSCQ1MX18 579 aa15.14■□□□□ 0.01
ATG4B-206ENST00000405546 GK5Q6ZS86 529 aa15.14■□□□□ 0.01
ATG4B-206ENST00000405546 TMEM26Q6ZUK4 368 aa15.14■□□□□ 0.01
ATG4B-206ENST00000405546 LDB1Q86U70 411 aaPredicted RBP15.14■□□□□ 0.01
ATG4B-206ENST00000405546 ERI1Q8IV48 349 aaKnown RBP15.14■□□□□ 0.01
ATG4B-206ENST00000405546 CNTD1Q8N815 330 aa15.14■□□□□ 0.01
ATG4B-206ENST00000405546 DDI1Q8WTU0 396 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms