RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 C22orf39Q6P5X5 142 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 PKN3Q6P5Z2 889 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 NCEH1Q6PIU2 408 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 MICALCLQ6ZW33 695 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 RASSF3Q86WH2 238 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 SRRM1Q8IYB3 904 aaKnown RBP3.74□□□□□ -1.81
RTN4-208ENST00000404909 CYP4X1Q8N118 509 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 CPA6Q8N4T0 437 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 OTUD6BQ8N6M0 293 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 OR2AP1Q8NGE2 309 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 CDKL2Q92772 493 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 NXPE3Q969Y0 559 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 E2F7Q96AV8 911 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 FEM1CQ96JP0 617 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 NECTIN4Q96NY8 510 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 SLC2A11Q9BYW1 496 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 UGT1A7Q9HAW7 530 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 UGT1A10Q9HAW8 530 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 UGT1A8Q9HAW9 530 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 SMYD2Q9NRG4 433 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 OBP2AQ9NY56 170 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 FAM53CQ9NYF3 392 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 TXNDC16Q9P2K2 825 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 SOX13Q9UN79 622 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 ERVW-1Q9UQF0 538 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 HS3ST2Q9Y278 367 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 KCTD3Q9Y597 815 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 ARL5AQ9Y689 179 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 FAM169AQ9Y6X4 670 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 ATG2BQ96BY7 2078 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 FAM237BA0A1B0GVD1 139 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 LOC285095A0A1B0GVY8 99 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 HEATR9A2RTY3 570 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 GOLGA8CPA6NN73 597 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 A8MX80 341 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 HMGB1P1B2RPK0 211 aaPredicted RBP3.74□□□□□ -1.81
RTN4-208ENST00000404909 USP1O94782 785 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 VAPBO95292 243 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 NDST3O95803 873 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 FGF1P05230 155 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 DLDP09622 509 aaKnown RBP3.74□□□□□ -1.81
RTN4-208ENST00000404909 CISD3P0C7P0 127 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 CTPS1P17812 591 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 HLA-DPA1P20036 260 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 CA4P22748 312 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 ADRA1DP25100 572 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 GCAP28676 217 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 GJA4P35212 333 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 ABL2P42684 1182 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 CCNHP51946 323 aaPredicted RBP3.74□□□□□ -1.81
RTN4-208ENST00000404909 ST8SIA6P61647 398 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 SEMG2Q02383 582 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 DMC1Q14565 340 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 PTPRCAPQ14761 206 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 AAK1Q2M2I8 961 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 POM121L1PQ3SYA9 428 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 DPY19L3Q6ZPD9 716 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 CROCCP2Q86T23 111 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 METTL3Q86U44 580 aaKnown RBP3.74□□□□□ -1.81
RTN4-208ENST00000404909 TMEM135Q86UB9 458 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 KCNMB4Q86W47 210 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 KLHDC8BQ8IXV7 354 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 FAM76AQ8TAV0 307 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 ELSPBP1Q96BH3 223 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 CERS2Q96G23 380 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 ATXN7L3BQ96GX2 97 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 AGAP2Q99490 1192 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 ADGRE3Q9BY15 652 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 ATP13A3Q9H7F0 1226 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 IARS2Q9NSE4 1012 aaKnown RBP3.74□□□□□ -1.81
RTN4-208ENST00000404909 ELOVL2Q9NXB9 296 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.74□□□□□ -1.819e-9■■■■■ 42.6
RTN4-208ENST00000404909 PSMC3IPQ9P2W1 217 aaPredicted RBP3.74□□□□□ -1.81
RTN4-208ENST00000404909 LIMD1Q9UGP4 676 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 SLC8A2Q9UPR5 921 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 TCAF1Q9Y4C2 921 aa3.74□□□□□ -1.81
RTN4-208ENST00000404909 ZCWPW2A0A1B0GU75 182 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 ANTXRLA6NF34 631 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 ANKRD66B4E2M5 251 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 AURKAO14965 403 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 PRLP01236 227 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 EPOP01588 193 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 UGT2B4P06133 528 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 ALPIP09923 528 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 HLA-EP13747 358 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 FOSL2P15408 326 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 CREB1P16220 341 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 TSHRP16473 764 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 NR1D1P20393 614 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 ABCG1P45844 678 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 AP1S1P61966 158 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 BMPR2Q13873 1038 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 MYLK3Q32MK0 819 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 ITPRIPL2Q3MIP1 535 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 FNDC3BQ53EP0 1204 aaKnown RBP3.73□□□□□ -1.81
RTN4-208ENST00000404909 LRRC73Q5JTD7 316 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 SPANXN3Q5MJ09 141 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 ARMC12Q5T9G4 340 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 MROH9Q5TGP6 573 aa3.73□□□□□ -1.81
RTN4-208ENST00000404909 STEAP4Q687X5 459 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms