RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 ARHGEF26Q96DR7 871 aa9.39□□□□□ -0.91
NUP43-204ENST00000403890 PSMB7Q99436 277 aa9.39□□□□□ -0.91
NUP43-204ENST00000403890 INTS2Q9H0H0 1204 aaKnown RBP9.39□□□□□ -0.91
NUP43-204ENST00000403890 MBNL1Q9NR56 388 aaKnown RBP9.39□□□□□ -0.91
NUP43-204ENST00000403890 SLC39A1Q9NY26 324 aa9.39□□□□□ -0.91
NUP43-204ENST00000403890 PILRAQ9UKJ1 303 aa9.39□□□□□ -0.91
NUP43-204ENST00000403890 TRAF3IP3Q9Y228 551 aa9.39□□□□□ -0.91
NUP43-204ENST00000403890 KCTD3Q9Y597 815 aa9.39□□□□□ -0.91
NUP43-204ENST00000403890 KCNMB2Q9Y691 235 aa9.39□□□□□ -0.91
NUP43-204ENST00000403890 SPENQ96T58 3664 aaKnown RBP9.38□□□□□ -0.91
NUP43-204ENST00000403890 IGHV5-10-1A0A0J9YXX1 117 aa9.38□□□□□ -0.91
NUP43-204ENST00000403890 C16orf96A6NNT2 1141 aa9.38□□□□□ -0.91
NUP43-204ENST00000403890 M0QYV0 167 aa9.38□□□□□ -0.91
NUP43-204ENST00000403890 B4GAT1O43505 415 aa9.38□□□□□ -0.91
NUP43-204ENST00000403890 ZNF821O75541 412 aaPredicted RBP9.38□□□□□ -0.91
NUP43-204ENST00000403890 IGLV3-25P01717 112 aa9.38□□□□□ -0.91
NUP43-204ENST00000403890 NR2F2P24468 414 aa9.38□□□□□ -0.91
NUP43-204ENST00000403890 HTR1BP28222 390 aa9.38□□□□□ -0.91
NUP43-204ENST00000403890 CCR1P32246 355 aa9.38□□□□□ -0.91
NUP43-204ENST00000403890 PSMC2P35998 433 aaKnown RBP9.38□□□□□ -0.91
NUP43-204ENST00000403890 ABL2P42684 1182 aa9.38□□□□□ -0.91
NUP43-204ENST00000403890 MXI1P50539 228 aa9.38□□□□□ -0.91
NUP43-204ENST00000403890 DNA2P51530 1060 aa9.38□□□□□ -0.91
NUP43-204ENST00000403890 IRAK1P51617 712 aa9.38□□□□□ -0.91
NUP43-204ENST00000403890 SRP54P61011 504 aaKnown RBP9.38□□□□□ -0.91
NUP43-204ENST00000403890 EIF4EBP2Q13542 120 aaPredicted RBP9.38□□□□□ -0.91
NUP43-204ENST00000403890 TRA2AQ13595 282 aaKnown RBP eCLIP9.38□□□□□ -0.91
NUP43-204ENST00000403890 CUL2Q13617 745 aa9.38□□□□□ -0.91
NUP43-204ENST00000403890 HLTFQ14527 1009 aaKnown RBP eCLIP9.38□□□□□ -0.91
NUP43-204ENST00000403890 CLPPQ16740 277 aaPredicted RBP9.38□□□□□ -0.91
NUP43-204ENST00000403890 EIF2S3LQ2VIR3 472 aaKnown RBP9.38□□□□□ -0.91
NUP43-204ENST00000403890 EDRF1Q3B7T1 1238 aa9.38□□□□□ -0.91
NUP43-204ENST00000403890 CARD16Q5EG05 197 aa9.38□□□□□ -0.91
NUP43-204ENST00000403890 DCAF12Q5T6F0 453 aa9.38□□□□□ -0.91
NUP43-204ENST00000403890 LCE2CQ5TA81 110 aa9.38□□□□□ -0.91
NUP43-204ENST00000403890 C16orf46Q6P387 395 aa9.38□□□□□ -0.91
NUP43-204ENST00000403890 ENPP7Q6UWV6 458 aa9.38□□□□□ -0.91
NUP43-204ENST00000403890 UNC5BQ8IZJ1 945 aa9.38□□□□□ -0.91
NUP43-204ENST00000403890 NLGN4XQ8N0W4 816 aa9.38□□□□□ -0.91
NUP43-204ENST00000403890 SLC34A3Q8N130 599 aa9.38□□□□□ -0.91
NUP43-204ENST00000403890 NLGN4YQ8NFZ3 816 aaPredicted RBP9.38□□□□□ -0.91
NUP43-204ENST00000403890 USP28Q96RU2 1077 aa9.38□□□□□ -0.91
NUP43-204ENST00000403890 RBM15Q96T37 977 aaKnown RBP eCLIP9.38□□□□□ -0.914e-6■■■■□ 20
NUP43-204ENST00000403890 CEP44Q9C0F1 390 aa9.38□□□□□ -0.91
NUP43-204ENST00000403890 EXOC1Q9NV70 894 aa9.38□□□□□ -0.91
NUP43-204ENST00000403890 DKK3Q9UBP4 350 aa9.38□□□□□ -0.91
NUP43-204ENST00000403890 VANGL2Q9ULK5 521 aa9.38□□□□□ -0.91
NUP43-204ENST00000403890 ITM2BQ9Y287 266 aa9.38□□□□□ -0.91
NUP43-204ENST00000403890 NAV3Q8IVL0 2385 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 LOC101059948A0A1B0GTJ6 334 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 POLR2DO15514 142 aaKnown RBP9.37□□□□□ -0.91
NUP43-204ENST00000403890 ZW10O43264 779 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 MMP20O60882 483 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 TM7SF2O76062 418 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 TNFP01375 233 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 RHOCP08134 193 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 PAEPP09466 180 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 ALDH4A1P30038 563 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 CSTF2P33240 577 aaKnown RBP eCLIP9.37□□□□□ -0.91
NUP43-204ENST00000403890 CCNHP51946 323 aaPredicted RBP9.37□□□□□ -0.91
NUP43-204ENST00000403890 CDH4P55283 916 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 OR1D5P58170 312 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 RAB15P59190 212 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 MCCD1P59942 119 aaPredicted RBP9.37□□□□□ -0.91
NUP43-204ENST00000403890 YWHAZP63104 245 aaKnown RBP9.37□□□□□ -0.91
NUP43-204ENST00000403890 SLC20A2Q08357 652 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 ABHD18Q0P651 414 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 MTA1Q13330 715 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 STK38Q15208 465 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 STILQ15468 1287 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 ZNF805Q5CZA5 627 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 ATP1A1-AS1Q5TC04 95 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 KDELC2Q7Z4H8 507 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 TAF8Q7Z7C8 310 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 PCDH20Q8N6Y1 951 aaKnown RBP9.37□□□□□ -0.91
NUP43-204ENST00000403890 DCAF4L2Q8NA75 395 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 TP53I13Q8NBR0 393 aaPredicted RBP9.37□□□□□ -0.91
NUP43-204ENST00000403890 ATL2Q8NHH9 583 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 PRR7Q8TB68 274 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 STARD8Q92502 1023 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 CCDC74BQ96LY2 380 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 NUDT22Q9BRQ3 303 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 SPRY4Q9C004 299 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 DPEP2Q9H4A9 486 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 POPDC2Q9HBU9 364 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 ST7Q9NRC1 585 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 MAP4K5Q9Y4K4 846 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 PCNX1Q96RV3 2341 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 NF1P21359 2839 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 APCP25054 2843 aa9.37□□□□□ -0.91
NUP43-204ENST00000403890 HIVEP1P15822 2718 aa9.36□□□□□ -0.91
NUP43-204ENST00000403890 A0A0D9SEW6 157 aa9.36□□□□□ -0.91
NUP43-204ENST00000403890 B4DGG1 531 aa9.36□□□□□ -0.91
NUP43-204ENST00000403890 B4E171 279 aa9.36□□□□□ -0.91
NUP43-204ENST00000403890 AREL1O15033 823 aa9.36□□□□□ -0.91
NUP43-204ENST00000403890 KLRC4O43908 158 aa9.36□□□□□ -0.91
NUP43-204ENST00000403890 STX10O60499 249 aa9.36□□□□□ -0.91
NUP43-204ENST00000403890 LDLRP01130 860 aa9.36□□□□□ -0.91
NUP43-204ENST00000403890 CCNYL3P0C7X3 344 aa9.36□□□□□ -0.91
NUP43-204ENST00000403890 RPL13P26373 211 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms