RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 C1orf74Q96LT6 269 aa4.06□□□□□ -1.76
HMGB1P17-201ENST00000403495 SORCS2Q96PQ0 1159 aa4.06□□□□□ -1.76
HMGB1P17-201ENST00000403495 SRSF8Q9BRL6 282 aaKnown RBP4.06□□□□□ -1.76
HMGB1P17-201ENST00000403495 H2AFJQ9BTM1 129 aa4.06□□□□□ -1.76
HMGB1P17-201ENST00000403495 PLEKHA4Q9H4M7 779 aa4.06□□□□□ -1.76
HMGB1P17-201ENST00000403495 SYNCQ9H7C4 482 aa4.06□□□□□ -1.76
HMGB1P17-201ENST00000403495 KAT14Q9H8E8 782 aa4.06□□□□□ -1.76
HMGB1P17-201ENST00000403495 DDX4Q9NQI0 724 aaKnown RBP4.06□□□□□ -1.76
HMGB1P17-201ENST00000403495 RRP7BPQ9NSQ0 103 aa4.06□□□□□ -1.76
HMGB1P17-201ENST00000403495 SEL1LQ9UBV2 794 aa4.06□□□□□ -1.76
HMGB1P17-201ENST00000403495 HAO1Q9UJM8 370 aa4.06□□□□□ -1.76
HMGB1P17-201ENST00000403495 CARD8Q9Y2G2 431 aa4.06□□□□□ -1.76
HMGB1P17-201ENST00000403495 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P17-201ENST00000403495 LYVE1Q9Y5Y7 322 aa4.06□□□□□ -1.76
HMGB1P17-201ENST00000403495 COX11Q9Y6N1 276 aa4.06□□□□□ -1.76
HMGB1P17-201ENST00000403495 A3GALT2U3KPV4 340 aa4.06□□□□□ -1.76
HMGB1P17-201ENST00000403495 A0A096LPK6 155 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 A0A1W2PQ09 198 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 CGB1A6NKQ9 187 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 MYO1GB0I1T2 1018 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 E5RJQ4 531 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 MASP2O00187 686 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 EBAG9O00559 213 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 PRPF4O43172 522 aaKnown RBP eCLIP4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 KLK8O60259 260 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 TLR2O60603 784 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 STARD3NLO95772 234 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 MT-CYBP00156 380 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 PRR35P0CG20 571 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 PTPN2P17706 415 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 CERS1P27544 350 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 SHMT1P34896 483 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 KRT20P35900 424 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 UBA7P41226 1012 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 NHLH1Q02575 133 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 SRSF4Q08170 494 aaKnown RBP4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 GOLGA8DPQ0D2H9 430 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 MTX1Q13505 466 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 ARHGEF6Q15052 776 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 SOWAHAQ2M3V2 549 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 DUSP28Q4G0W2 176 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 CXorf66Q5JRM2 361 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 EPHA10Q5JZY3 1008 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 CFAP58Q5T655 872 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 KIAA0930Q6ICG6 404 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 CPLX2Q6PUV4 134 aaKnown RBP4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 CHST9Q7L1S5 443 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 GALNT5Q7Z7M9 940 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 ANKRD13BQ86YJ7 626 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 SLC35F3Q8IY50 421 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 OR8H2Q8N162 312 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 ZCCHC9Q8N567 271 aaKnown RBP4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 SLC44A5Q8NCS7 719 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 ERGIC1Q969X5 290 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 NSUN4Q96CB9 384 aaKnown RBP4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 RNF183Q96D59 192 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 ZG16BQ96DA0 208 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 WDR83Q9BRX9 315 aaKnown RBP4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 STRA6Q9BX79 667 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 C1QTNF5Q9BXJ0 243 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 PRSS22Q9GZN4 317 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 CCDC68Q9H2F9 335 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 TMPRSS5Q9H3S3 457 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 SPATS2LQ9NUQ6 558 aaKnown RBP4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 NSMCE4AQ9NXX6 385 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 NDRG3Q9UGV2 375 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 RPS6KA6Q9UK32 745 aa4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 AAR2Q9Y312 384 aaKnown RBP4.05□□□□□ -1.76
HMGB1P17-201ENST00000403495 A0A0U1RQF3 1178 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 TMEM272A0A1B0GTI8 110 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 C17orf102A2RUQ5 167 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 FAM90A8PA6NJQ4 464 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 B4DLN1 442 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 USP17L23D6RBM5 183 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 H3BQ06 376 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 ATG13O75143 517 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 NDUFB8O95169 186 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 OR2C1O95371 312 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 TUBBP07437 444 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 FAM90A13PP0C7W8 464 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 FAM90A24PP0C7X0 464 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 CSH1P0DML2 217 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 CSH2P0DML3 217 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 CBSLP0DN79 551 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 IRF1P10914 325 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 ETFAP13804 333 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 CDAP32320 146 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 DCTDP32321 178 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 PTGER1P34995 402 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 CBSP35520 551 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 AVPR1AP37288 418 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 GPR12P47775 334 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 CDH8P55286 799 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 SORDQ00796 357 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 CSTF3Q12996 717 aaKnown RBP4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 CHAF1BQ13112 559 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 LPIN1Q14693 890 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 INPP5JQ15735 1006 aaPredicted RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms