RNA–Protein interactions for RNA: ENST00000402554.7

NDEL1-203, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-203ENST00000402554 TIFABQ6ZNK6 161 aa13.23□□□□□ -0.29
NDEL1-203ENST00000402554 SETD3Q86TU7 594 aaPredicted RBP13.23□□□□□ -0.29
NDEL1-203ENST00000402554 SPATS2Q86XZ4 545 aaKnown RBP13.23□□□□□ -0.29
NDEL1-203ENST00000402554 BBS5Q8N3I7 341 aa13.23□□□□□ -0.29
NDEL1-203ENST00000402554 PGBD5Q8N414 524 aa13.23□□□□□ -0.29
NDEL1-203ENST00000402554 TTC8Q8TAM2 541 aa13.23□□□□□ -0.29
NDEL1-203ENST00000402554 PTCD2Q8WV60 388 aaKnown RBP13.23□□□□□ -0.29
NDEL1-203ENST00000402554 PBXIP1Q96AQ6 731 aa13.23□□□□□ -0.29
NDEL1-203ENST00000402554 SPON2Q9BUD6 331 aa13.23□□□□□ -0.29
NDEL1-203ENST00000402554 TRMT61BQ9BVS5 477 aaKnown RBP13.23□□□□□ -0.29
NDEL1-203ENST00000402554 BRD9Q9H8M2 597 aa13.23□□□□□ -0.29
NDEL1-203ENST00000402554 PDFQ9HBH1 243 aa13.23□□□□□ -0.29
NDEL1-203ENST00000402554 SLC2A4RGQ9NR83 387 aa13.23□□□□□ -0.29
NDEL1-203ENST00000402554 C20orf96Q9NUD7 363 aaPredicted RBP13.23□□□□□ -0.29
NDEL1-203ENST00000402554 HAUS2Q9NVX0 235 aa13.23□□□□□ -0.29
NDEL1-203ENST00000402554 IL1RAPL1Q9NZN1 696 aa13.23□□□□□ -0.29
NDEL1-203ENST00000402554 CPQQ9Y646 472 aa13.23□□□□□ -0.29
NDEL1-203ENST00000402554 KDELR3O43731 214 aa13.22□□□□□ -0.29
NDEL1-203ENST00000402554 MMP2P08253 660 aa13.22□□□□□ -0.29
NDEL1-203ENST00000402554 NMBRP28336 390 aa13.22□□□□□ -0.29
NDEL1-203ENST00000402554 HOXD9P28356 352 aaPredicted RBP13.22□□□□□ -0.29
NDEL1-203ENST00000402554 FOXN2P32314 431 aa13.22□□□□□ -0.29
NDEL1-203ENST00000402554 GP5P40197 560 aa13.22□□□□□ -0.29
NDEL1-203ENST00000402554 CCNFP41002 786 aa13.22□□□□□ -0.29
NDEL1-203ENST00000402554 ZXDBP98169 803 aa13.22□□□□□ -0.29
NDEL1-203ENST00000402554 SMAD1Q15797 465 aaKnown RBP13.22□□□□□ -0.29
NDEL1-203ENST00000402554 PDK4Q16654 411 aa13.22□□□□□ -0.29
NDEL1-203ENST00000402554 GRTP1Q5TC63 336 aa13.22□□□□□ -0.29
NDEL1-203ENST00000402554 MICALCLQ6ZW33 695 aa13.22□□□□□ -0.29
NDEL1-203ENST00000402554 KDELC2Q7Z4H8 507 aa13.22□□□□□ -0.29
NDEL1-203ENST00000402554 KCNMB4Q86W47 210 aa13.22□□□□□ -0.29
NDEL1-203ENST00000402554 MFSD6LQ8IWD5 586 aa13.22□□□□□ -0.29
NDEL1-203ENST00000402554 YAF2Q8IY57 180 aa13.22□□□□□ -0.29
NDEL1-203ENST00000402554 CACNA2D3Q8IZS8 1091 aa13.22□□□□□ -0.29
NDEL1-203ENST00000402554 FLCNQ8NFG4 579 aa13.22□□□□□ -0.29
NDEL1-203ENST00000402554 ARRDC2Q8TBH0 407 aa13.22□□□□□ -0.29
NDEL1-203ENST00000402554 SEC16BQ96JE7 1060 aa13.22□□□□□ -0.29
NDEL1-203ENST00000402554 CPNE1Q99829 537 aa13.22□□□□□ -0.29
NDEL1-203ENST00000402554 POLR1EQ9GZS1 481 aaKnown RBP13.22□□□□□ -0.29
NDEL1-203ENST00000402554 IQCGQ9H095 443 aaKnown RBP13.22□□□□□ -0.29
NDEL1-203ENST00000402554 ARNT2Q9HBZ2 717 aa13.22□□□□□ -0.29
NDEL1-203ENST00000402554 MRM3Q9HC36 420 aaKnown RBP13.22□□□□□ -0.29
NDEL1-203ENST00000402554 ARHGEF3Q9NR81 526 aa13.22□□□□□ -0.29
NDEL1-203ENST00000402554 SLC17A7Q9P2U7 560 aa13.22□□□□□ -0.29
NDEL1-203ENST00000402554 RAPGEFL1Q9UHV5 662 aa13.22□□□□□ -0.29
NDEL1-203ENST00000402554 TBC1D30Q9Y2I9 924 aa13.22□□□□□ -0.29
NDEL1-203ENST00000402554 PSAT1Q9Y617 370 aa13.22□□□□□ -0.29
NDEL1-203ENST00000402554 PRR33A8MZF0 331 aa13.21□□□□□ -0.29
NDEL1-203ENST00000402554 TAC1P20366 129 aa13.21□□□□□ -0.29
NDEL1-203ENST00000402554 ADRA1DP25100 572 aa13.21□□□□□ -0.29
NDEL1-203ENST00000402554 HSP90AA5PQ58FG0 334 aa13.21□□□□□ -0.29
NDEL1-203ENST00000402554 ARMC3Q5W041 872 aa13.21□□□□□ -0.29
NDEL1-203ENST00000402554 PDPK2PQ6A1A2 396 aa13.21□□□□□ -0.29
NDEL1-203ENST00000402554 OR52K2Q8NGK3 314 aa13.21□□□□□ -0.29
NDEL1-203ENST00000402554 BPIFB1Q8TDL5 484 aa13.21□□□□□ -0.29
NDEL1-203ENST00000402554 TADA1Q96BN2 335 aa13.21□□□□□ -0.29
NDEL1-203ENST00000402554 MFSD1Q9H3U5 465 aa13.21□□□□□ -0.29
NDEL1-203ENST00000402554 ATP13A1Q9HD20 1204 aa13.21□□□□□ -0.29
NDEL1-203ENST00000402554 HEBP1Q9NRV9 189 aa13.21□□□□□ -0.29
NDEL1-203ENST00000402554 TDP1Q9NUW8 608 aa13.21□□□□□ -0.29
NDEL1-203ENST00000402554 FGFR1OP2Q9NVK5 253 aa13.21□□□□□ -0.29
NDEL1-203ENST00000402554 MKS1Q9NXB0 559 aa13.21□□□□□ -0.29
NDEL1-203ENST00000402554 UBA2Q9UBT2 640 aaPredicted RBP13.21□□□□□ -0.29
NDEL1-203ENST00000402554 GGA2Q9UJY4 613 aa13.21□□□□□ -0.29
NDEL1-203ENST00000402554 LSM7Q9UK45 103 aaKnown RBP13.21□□□□□ -0.29
NDEL1-203ENST00000402554 GRID1Q9ULK0 1009 aa13.21□□□□□ -0.29
NDEL1-203ENST00000402554 TCAF1Q9Y4C2 921 aa13.21□□□□□ -0.29
NDEL1-203ENST00000402554 TYW5A2RUC4 315 aaKnown RBP13.21□□□□□ -0.3
NDEL1-203ENST00000402554 GREM1O60565 184 aa13.21□□□□□ -0.3
NDEL1-203ENST00000402554 ITGA2BP08514 1039 aa13.21□□□□□ -0.3
NDEL1-203ENST00000402554 CD72P21854 359 aa13.21□□□□□ -0.3
NDEL1-203ENST00000402554 CHRNA4P43681 627 aa13.21□□□□□ -0.3
NDEL1-203ENST00000402554 NUMBP49757 651 aa13.21□□□□□ -0.3
NDEL1-203ENST00000402554 TEDDM1Q5T9Z0 273 aa13.21□□□□□ -0.3
NDEL1-203ENST00000402554 CWF19L1Q69YN2 538 aaKnown RBP13.21□□□□□ -0.3
NDEL1-203ENST00000402554 TRIM68Q6AZZ1 485 aa13.21□□□□□ -0.3
NDEL1-203ENST00000402554 Q6ZNB5 142 aa13.21□□□□□ -0.3
NDEL1-203ENST00000402554 RGS9BPQ6ZS82 235 aa13.21□□□□□ -0.3
NDEL1-203ENST00000402554 PIGWQ7Z7B1 504 aa13.21□□□□□ -0.3
NDEL1-203ENST00000402554 STRA8Q7Z7C7 330 aa13.21□□□□□ -0.3
NDEL1-203ENST00000402554 SLC25A41Q8N5S1 370 aa13.21□□□□□ -0.3
NDEL1-203ENST00000402554 CELF5Q8N6W0 485 aaKnown RBP13.21□□□□□ -0.3
NDEL1-203ENST00000402554 HJURPQ8NCD3 748 aaPredicted RBP13.21□□□□□ -0.3
NDEL1-203ENST00000402554 LRRC8CQ8TDW0 803 aa13.21□□□□□ -0.3
NDEL1-203ENST00000402554 SRPK1Q96SB4 655 aaKnown RBP13.21□□□□□ -0.3
NDEL1-203ENST00000402554 SEMA3CQ99985 751 aa13.21□□□□□ -0.3
NDEL1-203ENST00000402554 ELAC2Q9BQ52 826 aaKnown RBP13.21□□□□□ -0.3
NDEL1-203ENST00000402554 SEPT3Q9UH03 358 aa13.21□□□□□ -0.3
NDEL1-203ENST00000402554 CHD5Q8TDI0 1954 aa13.2□□□□□ -0.3
NDEL1-203ENST00000402554 TTC24A2A3L6 582 aaPredicted RBP13.2□□□□□ -0.3
NDEL1-203ENST00000402554 CCDC78A2IDD5 438 aa13.2□□□□□ -0.3
NDEL1-203ENST00000402554 ARNTLO00327 626 aa13.2□□□□□ -0.3
NDEL1-203ENST00000402554 TBL1XO60907 577 aa13.2□□□□□ -0.3
NDEL1-203ENST00000402554 SPRP35270 261 aaPredicted RBP13.2□□□□□ -0.3
NDEL1-203ENST00000402554 SOX9P48436 509 aa13.2□□□□□ -0.3
NDEL1-203ENST00000402554 SERPINH1P50454 418 aaKnown RBP13.2□□□□□ -0.3
NDEL1-203ENST00000402554 SLC7A9P82251 487 aa13.2□□□□□ -0.3
NDEL1-203ENST00000402554 PDE1BQ01064 536 aa13.2□□□□□ -0.3
NDEL1-203ENST00000402554 FCHO2Q0JRZ9 810 aa13.2□□□□□ -0.3
NDEL1-203ENST00000402554 USP4Q13107 963 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms