RNA–Protein interactions for RNA: ENST00000402383.3

VIM2P-201, Transcript of vimentin 2, pseudogene, humanhuman

BASIC

Gene VIM2P, Length 1,294 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM2P-201ENST00000402383 ZNF143P52747 638 aaPredicted RBP6.72□□□□□ -1.33
VIM2P-201ENST00000402383 COPB1P53618 953 aaKnown RBP6.72□□□□□ -1.33
VIM2P-201ENST00000402383 YBEYP58557 167 aaPredicted RBP6.72□□□□□ -1.33
VIM2P-201ENST00000402383 GPLD1P80108 840 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 ARF5P84085 180 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 GNA12Q03113 381 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 SRSF11Q05519 484 aaKnown RBP6.72□□□□□ -1.33
VIM2P-201ENST00000402383 NME3Q13232 169 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 RAPGEF1Q13905 1077 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 CLEC16AQ2KHT3 1053 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 ZNF284Q2VY69 593 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 ARL13BQ3SXY8 428 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.72□□□□□ -1.33
VIM2P-201ENST00000402383 FKBP15Q5T1M5 1219 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 KIAA1161Q6NSJ0 714 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 C22orf39Q6P5X5 142 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 ERN2Q76MJ5 926 aaKnown RBP6.72□□□□□ -1.33
VIM2P-201ENST00000402383 MON1BQ7L1V2 547 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 IRF2BP2Q7Z5L9 587 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 HORMAD1Q86X24 394 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 UMODL1-AS1Q8N2C9 162 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 CHCHD4Q8N4Q1 142 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 FAM181AQ8N9Y4 354 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 DENND6BQ8NEG7 585 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 OR14C36Q8NHC7 312 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 FNIP1Q8TF40 1166 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 TBATAQ96M53 351 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 EDEM3Q9BZQ6 932 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 TRIM5Q9C035 493 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 MIR1-1HGQ9H1L0 117 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 KCNF1Q9H3M0 494 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 USP29Q9HBJ7 922 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 GDF3Q9NR23 364 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 LATS2Q9NRM7 1088 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 KLHL11Q9NVR0 708 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 FANCLQ9NW38 375 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 DONSONQ9NYP3 566 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 OR12D3Q9UGF7 316 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 PRDM4Q9UKN5 801 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 BTBD3Q9Y2F9 522 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 ZNF462Q96JM2 2506 aa6.72□□□□□ -1.33
VIM2P-201ENST00000402383 ZFC3H1O60293 1989 aaKnown RBP6.71□□□□□ -1.33
VIM2P-201ENST00000402383 TBC1D3DA0A087WVF3 549 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 TBC1D3IA0A087WXS9 549 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 TBC1D3EA0A087X179 549 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 TBC1D3KA0A087X1G2 549 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 UQCRHLA0A096LP55 91 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 A0A0D9SEW6 157 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 A0A1W2PQC6 194 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 TBC1D3FA6NER0 549 aaPredicted RBP6.71□□□□□ -1.34
VIM2P-201ENST00000402383 TBC1D3LB9A6J9 549 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 TAF4O00268 1085 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 WNT9AO14904 365 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 AREL1O15033 823 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 CBFA2T2O43439 604 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 SMAD6O43541 496 aaKnown RBP6.71□□□□□ -1.34
VIM2P-201ENST00000402383 NRDCO43847 1150 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 RTN2O75298 545 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 GHRHP01286 108 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 UQCRHP07919 91 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 ATXN1LP0C7T5 689 aaKnown RBP6.71□□□□□ -1.34
VIM2P-201ENST00000402383 CCDC172P0C7W6 258 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 TBC1D3HP0C7X1 549 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 KRT3P12035 628 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 GZMAP12544 262 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 ATP1A3P13637 1013 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 ACPPP15309 386 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 ACP1P24666 158 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 OR1E1P30953 314 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 SDC4P31431 198 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 RFC1P35251 1148 aaPredicted RBP6.71□□□□□ -1.34
VIM2P-201ENST00000402383 ADH7P40394 386 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 PRKCIP41743 596 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 ZNF135P52742 658 aaPredicted RBP6.71□□□□□ -1.34
VIM2P-201ENST00000402383 HDAC4P56524 1084 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 C21orf59P57076 290 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 POLR2FP61218 127 aaKnown RBP6.71□□□□□ -1.34
VIM2P-201ENST00000402383 PPP2CBP62714 309 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 PPP2CAP67775 309 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 PCSK7Q16549 785 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 FIGNQ5HY92 759 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 LCE2CQ5TA81 110 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 NAA35Q5VZE5 725 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 TBC1D3GQ6DHY5 549 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 TBC1D3CQ6IPX1 549 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.71□□□□□ -1.34
VIM2P-201ENST00000402383 CIR1Q86X95 450 aaPredicted RBP6.71□□□□□ -1.34
VIM2P-201ENST00000402383 SPATS2Q86XZ4 545 aaKnown RBP6.71□□□□□ -1.34
VIM2P-201ENST00000402383 PSTKQ8IV42 348 aaKnown RBP6.71□□□□□ -1.34
VIM2P-201ENST00000402383 GALNT12Q8IXK2 581 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 TBC1D3Q8IZP1 549 aaPredicted RBP6.71□□□□□ -1.34
VIM2P-201ENST00000402383 GOLGA6L1Q8N7Z2 621 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 ANKRD20A12PQ8NF67 263 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 FBF1Q8TES7 1133 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 SETD7Q8WTS6 366 aaKnown RBP6.71□□□□□ -1.34
VIM2P-201ENST00000402383 SLC20A1Q8WUM9 679 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 RXFP2Q8WXD0 754 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 CPA5Q8WXQ8 436 aa6.71□□□□□ -1.34
VIM2P-201ENST00000402383 ARHGEF2Q92974 986 aaKnown RBP6.71□□□□□ -1.34
VIM2P-201ENST00000402383 ERLEC1Q96DZ1 483 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms