RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 TRAPPC9Q96Q05 1148 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 GORASP1Q9BQQ3 440 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 RGS18Q9NS28 235 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 UXTQ9UBK9 157 aaPredicted RBP12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 AP4S1Q9Y587 144 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 MYADML2A6NDP7 307 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 TRPC5OSA6NMA1 111 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 GIPC1O14908 333 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 RNASEH2AO75792 299 aaKnown RBP12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 LINC00032P0C843 101 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 PRSS56P0CW18 603 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 CHRM3P20309 590 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 ATP5F1P24539 256 aaPredicted RBP12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 GRIA2P42262 883 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 DPP6P42658 865 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 CPT1AP50416 773 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 SLC5A3P53794 718 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 GALNT2Q10471 571 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 VPS26BQ4G0F5 336 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 ZBTB49Q6ZSB9 765 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 MFN1Q8IWA4 741 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 ZNF786Q8N393 782 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 ATAD1Q8NBU5 361 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 DNAJB14Q8TBM8 379 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 CNDP1Q96KN2 507 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 KCNA7Q96RP8 456 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 PARK7Q99497 189 aaKnown RBP12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 SEPT5Q99719 369 aaPredicted RBP12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 OLFM1Q99784 485 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 COQ10BQ9H8M1 238 aa12.76□□□□□ -0.37
PPP4R1-202ENST00000400555 BNIP3LO60238 219 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 CNTN5O94779 1100 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 KPNA2P52292 529 aaKnown RBP12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 FOXD4Q12950 439 aaPredicted RBP12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 LAMB3Q13751 1172 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 PGM2L1Q6PCE3 622 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 ALKAL1Q6UXT8 129 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 MFSD6LQ8IWD5 586 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 PSMG2Q969U7 264 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 SLC2A13Q96QE2 648 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 SEPHS2Q99611 448 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 DCUN1D5Q9BTE7 237 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 UPF3AQ9H1J1 476 aaKnown RBP12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 AGO3Q9H9G7 860 aaKnown RBP12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 RHBDL2Q9NX52 303 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 PDLIM1O00151 329 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 PFDN1O60925 122 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 SRP72O76094 671 aaKnown RBP12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 F2P00734 622 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 KCNE1P15382 129 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 STX5Q13190 355 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 ZNF235Q14590 738 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 LRRC23Q53EV4 343 aaPredicted RBP12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 DCLRE1AQ6PJP8 1040 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 KBTBD6Q86V97 674 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 ARHGAP18Q8N392 663 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 PTGR2Q8N8N7 351 aaPredicted RBP12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 SNRNP27Q8WVK2 155 aaKnown RBP12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 ANKRD49Q8WVL7 239 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 KLHL32Q96NJ5 620 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 TCAF1Q9Y4C2 921 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 ASB3Q9Y575 518 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 ACTL7AQ9Y615 435 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 LTBP3Q9NS15 1303 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 HEATR9A2RTY3 570 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 ANGPT2O15123 496 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 CLIC3O95833 236 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 FAM58BPP0C7Q3 252 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 C1QTNF8P60827 252 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 NADK2Q4G0N4 442 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 FAM91A1Q658Y4 838 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 LILRA2Q8N149 483 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 TNFRSF12AQ9NP84 129 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 UBAP1Q9NZ09 502 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 CDH9Q9ULB4 789 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 TRAF6Q9Y4K3 522 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 MGAMO43451 1857 aa12.75□□□□□ -0.37
PPP4R1-202ENST00000400555 AXLP30530 894 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 SERPINH1P50454 418 aaKnown RBP12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 CDKL1Q00532 357 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 MGAT5BQ3V5L5 792 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 STXBP5Q5T5C0 1151 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 LRRC43Q8N309 656 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 STYXQ8WUJ0 223 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 HMCESQ96FZ2 354 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 FAM193BQ96PV7 902 aaPredicted RBP12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 VAT1Q99536 393 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 MRPL57Q9BQC6 102 aaKnown RBP12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 EML4Q9HC35 981 aaKnown RBP12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 TRIP12Q14669 1992 aaPredicted RBP12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 RLFQ13129 1914 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 H3BNX3 289 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 SPATA31D3P0C874 917 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 EEF1B2P24534 225 aaKnown RBP12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 FMO4P31512 558 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 ARSDP51689 593 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 HECTD2Q5U5R9 776 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 METTL21CQ5VZV1 264 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 SPATA31D4Q6ZUB0 917 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 CYS1Q717R9 158 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms