RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 LBX1P52954 281 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 LYPLAL1Q5VWZ2 237 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 ZNF470Q6ECI4 717 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 C3orf67Q6ZVT6 689 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 TXNRD3Q86VQ6 643 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 PRSS58Q8IYP2 241 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 ZCCHC7Q8N3Z6 543 aaKnown RBP11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 APOPT1Q96IL0 206 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 ZFRQ96KR1 1074 aaKnown RBP11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 SLC4A5Q9BY07 1137 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 TNKS2Q9H2K2 1166 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 CLN6Q9NWW5 311 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 COG5Q9UP83 839 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 MATN4O95460 622 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 CDC42P60953 191 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 C1QBPQ07021 282 aaKnown RBP11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 SPIRE1Q08AE8 756 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 INO80DQ53TQ3 878 aaPredicted RBP11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 RASSF6Q6ZTQ3 369 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 PACS2Q86VP3 889 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 C4orf19Q8IY42 314 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 TRPV3Q8NET8 790 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 OR6Y1Q8NGX8 325 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 TM6SF2Q9BZW4 377 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 RNF121Q9H920 327 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 PEX12O00623 359 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 SASH3O75995 380 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 HSD3B1P14060 373 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 CDH3P22223 829 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 TGFBR2P37173 567 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 TAS2R50P59544 299 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 MINDY4Q4G0A6 757 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 SPANXN2Q5MJ10 180 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 USB1Q9BQ65 265 aaKnown RBP11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 C2orf49Q9BVC5 232 aaPredicted RBP11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 DEC1Q9P2X7 70 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 PSME2Q9UL46 239 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 SLIT1O75093 1534 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 CLOCKO15516 846 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 MAPTP10636 758 aaKnown RBP11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 EPORP19235 508 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 RPL4P36578 427 aaKnown RBP11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 EIF2B2P49770 351 aaKnown RBP11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 SGCBQ16585 318 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 ILDR1Q86SU0 546 aaPredicted RBP11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 SMYD1Q8NB12 490 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 SYT17Q9BSW7 474 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 NOL6Q9H6R4 1146 aaKnown RBP11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 CDHR5Q9HBB8 845 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 THAP1Q9NVV9 213 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 PHF11Q9UIL8 331 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 OTOL1A6NHN0 477 aaPredicted RBP11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 F8VZ95 297 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 GLUD2P49448 558 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 INTS11Q5TA45 600 aaKnown RBP11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 STK32CQ86UX6 486 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 GPR152Q8TDT2 470 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 TRAPPC9Q96Q05 1148 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 CAB39LQ9H9S4 337 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 ANGPT4Q9Y264 503 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 MYRFQ9Y2G1 1151 aa11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 TNPO3Q9Y5L0 923 aaKnown RBP11.13□□□□□ -0.63
CACNA1C-215ENST00000399637 MAT2AP31153 395 aaKnown RBP11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 ELK3P41970 407 aa11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 ANTXR2P58335 489 aa11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 PPP1R15BQ5SWA1 713 aa11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 METTL21CQ5VZV1 264 aa11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 RAP1GAP2Q684P5 730 aa11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 ZFP1Q6P2D0 407 aa11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 ZC3H7AQ8IWR0 971 aaKnown RBP11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 ABRAQ8N0Z2 381 aa11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 CCDC115Q96NT0 180 aa11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 POLR1EQ9GZS1 481 aaKnown RBP11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 UBE2QL1A1L167 161 aa11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 TSPAN1O60635 241 aa11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 SELPP16109 830 aa11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 YBX3P16989 372 aaKnown RBP eCLIP11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 ZNF268Q14587 947 aaPredicted RBP11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 ZNF410Q86VK4 478 aa11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 NOA1Q8NC60 698 aaKnown RBP11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 OXNAD1Q96HP4 312 aaPredicted RBP11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 SLC38A2Q96QD8 506 aa11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 BTBD10Q9BSF8 475 aa11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 ABCC13Q9NSE7 274 aa11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 TOR4AQ9NXH8 423 aa11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 C15orf38-AP3S2A0A0A6YYH1 394 aa11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 ARL5CA6NH57 179 aa11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 C9J4A7 227 aa11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 ARPINQ7Z6K5 226 aa11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 ADHFE1Q8IWW8 467 aa11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 ZSWIM2Q8NEG5 633 aa11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 RPS6KA6Q9UK32 745 aa11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 VPS4AQ9UN37 437 aa11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 KPNA5O15131 536 aa11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 CLEC3AO75596 197 aa11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 MMP3P08254 477 aa11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 AMPD1P23109 780 aa11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 ACSM2AQ08AH3 577 aa11.12□□□□□ -0.63
CACNA1C-215ENST00000399637 RIN1Q13671 783 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms