RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 ARRB2P32121 409 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 CHRNA4P43681 627 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 PRAMEP78395 509 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 NSUN2Q08J23 767 aaKnown RBP eCLIP17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 MRNIPQ6NTE8 343 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 RSPO2Q6UXX9 243 aaPredicted RBP17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 ZNF783Q6ZMS7 281 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 TMC7Q7Z402 723 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 RNF168Q8IYW5 571 aaPredicted RBP17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 SLC25A41Q8N5S1 370 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 OR13J1Q8NGT2 312 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 UBXN10Q96LJ8 280 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 PSKH2Q96QS6 385 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 TRMOQ9BU70 441 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 CWH43Q9H720 699 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 EML4Q9HC35 981 aaKnown RBP17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 STX18Q9P2W9 335 aaKnown RBP17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 VWA7Q9Y334 891 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 ILVBLA1L0T0 632 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 DLX3O60479 287 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 ENTPD5O75356 428 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 LATS1O95835 1130 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 ATXN1LP0C7T5 689 aaKnown RBP17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 THRAP10827 490 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 MXRA7P84157 204 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 SATB1Q01826 763 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 GNA12Q03113 381 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 SMAD1Q15797 465 aaKnown RBP17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 ARL13AQ5H913 290 aaPredicted RBP17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 NADSYN1Q6IA69 706 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 FAM45BPQ6NSW5 357 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 CEP97Q8IW35 865 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 LGI2Q8N0V4 545 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 CPSF7Q8N684 471 aaKnown RBP17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 GPATCH11Q8N954 259 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 FAM45AQ8TCE6 357 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 GPR152Q8TDT2 470 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 NXNL1Q96CM4 212 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 TRMT2BQ96GJ1 504 aaKnown RBP17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 KLHL5Q96PQ7 755 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 SEMA3CQ99985 751 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 MGME1Q9BQP7 344 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 CRISPLD1Q9H336 500 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 ATXN3LQ9H3M9 355 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 CCSER2Q9H7U1 834 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 GPAMQ9HCL2 828 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 BATF3Q9NR55 127 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 XPR1Q9UBH6 696 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 CCDC189A1A4V9 331 aa17.83■□□□□ 0.44
HLA-DQB1-204ENST00000399084 TK2O00142 265 aa17.83■□□□□ 0.44
HLA-DQB1-204ENST00000399084 LDB2O43679 373 aa17.83■□□□□ 0.44
HLA-DQB1-204ENST00000399084 KDELR3O43731 214 aa17.83■□□□□ 0.44
HLA-DQB1-204ENST00000399084 LUC7L3O95232 432 aaKnown RBP17.83■□□□□ 0.44
HLA-DQB1-204ENST00000399084 NDST3O95803 873 aa17.83■□□□□ 0.44
HLA-DQB1-204ENST00000399084 ATF6P18850 670 aa17.83■□□□□ 0.44
HLA-DQB1-204ENST00000399084 OGNP20774 298 aaKnown RBP17.83■□□□□ 0.44
HLA-DQB1-204ENST00000399084 SAT1P21673 171 aa17.83■□□□□ 0.44
HLA-DQB1-204ENST00000399084 PSMA3P25788 255 aa17.83■□□□□ 0.44
HLA-DQB1-204ENST00000399084 CPOXP36551 454 aa17.83■□□□□ 0.44
HLA-DQB1-204ENST00000399084 ABCG1P45844 678 aa17.83■□□□□ 0.44
HLA-DQB1-204ENST00000399084 NAGLUP54802 743 aa17.83■□□□□ 0.44
HLA-DQB1-204ENST00000399084 UBAP2LQ14157 1087 aaKnown RBP17.83■□□□□ 0.44
HLA-DQB1-204ENST00000399084 KHDC1Q4VXA5 237 aaKnown RBP17.83■□□□□ 0.44
HLA-DQB1-204ENST00000399084 TLDC1Q6P9B6 456 aa17.83■□□□□ 0.44
HLA-DQB1-204ENST00000399084 AAGABQ6PD74 315 aa17.83■□□□□ 0.44
HLA-DQB1-204ENST00000399084 SDCCAG8Q86SQ7 713 aaPredicted RBP17.83■□□□□ 0.44
HLA-DQB1-204ENST00000399084 PGBD5Q8N414 524 aa17.83■□□□□ 0.44
HLA-DQB1-204ENST00000399084 GIMAP7Q8NHV1 300 aa17.83■□□□□ 0.44
HLA-DQB1-204ENST00000399084 ZNF461Q8TAF7 563 aa17.83■□□□□ 0.44
HLA-DQB1-204ENST00000399084 NACA2Q9H009 215 aa17.83■□□□□ 0.44
HLA-DQB1-204ENST00000399084 TRPM5Q9NZQ8 1165 aa17.83■□□□□ 0.44
HLA-DQB1-204ENST00000399084 ARHGAP26Q9UNA1 814 aa17.83■□□□□ 0.44
HLA-DQB1-204ENST00000399084 ZNF840PA6NDX5 716 aa17.82■□□□□ 0.44
HLA-DQB1-204ENST00000399084 FKBP6O75344 327 aa17.82■□□□□ 0.44
HLA-DQB1-204ENST00000399084 PIGNO95427 931 aa17.82■□□□□ 0.44
HLA-DQB1-204ENST00000399084 PSMG1O95456 288 aa17.82■□□□□ 0.44
HLA-DQB1-204ENST00000399084 CRTAMO95727 393 aa17.82■□□□□ 0.44
HLA-DQB1-204ENST00000399084 GLP2RO95838 553 aa17.82■□□□□ 0.44
HLA-DQB1-204ENST00000399084 S1PR4O95977 384 aa17.82■□□□□ 0.44
HLA-DQB1-204ENST00000399084 NCF2P19878 526 aaPredicted RBP17.82■□□□□ 0.44
HLA-DQB1-204ENST00000399084 ACTR3P61158 418 aa17.82■□□□□ 0.44
HLA-DQB1-204ENST00000399084 NAA20P61599 178 aa17.82■□□□□ 0.44
HLA-DQB1-204ENST00000399084 SLC34A1Q06495 639 aa17.82■□□□□ 0.44
HLA-DQB1-204ENST00000399084 NAA25Q14CX7 972 aa17.82■□□□□ 0.44
HLA-DQB1-204ENST00000399084 ANKRD33Q7Z3H0 272 aa17.82■□□□□ 0.44
HLA-DQB1-204ENST00000399084 MFSD6LQ8IWD5 586 aa17.82■□□□□ 0.44
HLA-DQB1-204ENST00000399084 ULK2Q8IYT8 1036 aa17.82■□□□□ 0.44
HLA-DQB1-204ENST00000399084 ZNF512Q96ME7 567 aaPredicted RBP17.82■□□□□ 0.44
HLA-DQB1-204ENST00000399084 TCF12Q99081 682 aa17.82■□□□□ 0.44
HLA-DQB1-204ENST00000399084 RTKNQ9BST9 563 aa17.82■□□□□ 0.44
HLA-DQB1-204ENST00000399084 NDE1Q9NXR1 346 aa17.82■□□□□ 0.44
HLA-DQB1-204ENST00000399084 NKX1-2Q9UD57 310 aaPredicted RBP17.82■□□□□ 0.44
HLA-DQB1-204ENST00000399084 MIA3Q5JRA6 1907 aa17.82■□□□□ 0.44
HLA-DQB1-204ENST00000399084 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 CCDC78A2IDD5 438 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 SOAT2O75908 522 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 ABLIM3O94929 683 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 HMBSP08397 361 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 MAXP61244 160 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms