RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 TICAM1Q8IUC6 712 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 SCAMP5Q8TAC9 235 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 SPPL2BQ8TCT7 592 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 ASB9Q96DX5 294 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 EPB41L1Q9H4G0 881 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 UBAP1Q9NZ09 502 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 SFMBT1Q9UHJ3 866 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 APPL1Q9UKG1 709 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 LZTS1Q9Y250 596 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 GIT1Q9Y2X7 761 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.2□□□□□ -0.3
PRAME-201ENST00000398741 TRPV2Q9Y5S1 764 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 CEP350Q5VT06 3117 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 SHROOM3Q8TF72 1996 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 A8MT66 165 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 AURKAO14965 403 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 B3GAT3O94766 335 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 RBP1P09455 135 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 CTSHP09668 335 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 CLCN5P51795 746 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 WNT3AP56704 352 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 PFKPQ01813 784 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 MAP2K5Q13163 448 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 IRF5Q13568 498 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 MAP7Q14244 749 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 FAM171BQ6P995 826 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 ISLR2Q6UXK2 745 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 BEND5Q7L4P6 421 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 PTPN18Q99952 460 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 MRPS26Q9BYN8 205 aaKnown RBP13.2□□□□□ -0.3
PRAME-201ENST00000398741 GPBP1L1Q9HC44 474 aaPredicted RBP13.2□□□□□ -0.3
PRAME-201ENST00000398741 NDFIP2Q9NV92 336 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 TMLHEQ9NVH6 421 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 FLRT1Q9NZU1 646 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.2□□□□□ -0.3
PRAME-201ENST00000398741 SUCOQ9UBS9 1254 aaKnown RBP13.2□□□□□ -0.3
PRAME-201ENST00000398741 PCDHGA7Q9Y5G6 932 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 PSMD12O00232 456 aaPredicted RBP13.19□□□□□ -0.3
PRAME-201ENST00000398741 OR6B1O95007 311 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 RTN3O95197 1032 aaPredicted RBP13.19□□□□□ -0.3
PRAME-201ENST00000398741 FAM58BPP0C7Q3 252 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 CCDC166P0CW27 439 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 BRCC3P46736 316 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 PLK1P53350 603 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 HUNKP57058 714 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 ITKQ08881 620 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 FSCN1Q16658 493 aaKnown RBP13.19□□□□□ -0.3
PRAME-201ENST00000398741 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.19□□□□□ -0.3
PRAME-201ENST00000398741 AGKQ53H12 422 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 NOMO2Q5JPE7 1267 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 C6orf52Q5T4I8 152 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 MANEALQ5VSG8 457 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 REP15Q6BDI9 236 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 SLC22A9Q8IVM8 553 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 AHI1Q8N157 1196 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 CASP10Q92851 521 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 EME1Q96AY2 570 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 PHF21BQ96EK2 531 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 ZFRQ96KR1 1074 aaKnown RBP13.19□□□□□ -0.3
PRAME-201ENST00000398741 PRICKLE1Q96MT3 831 aaPredicted RBP13.19□□□□□ -0.3
PRAME-201ENST00000398741 OLFM1Q99784 485 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 UNC93B1Q9H1C4 597 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 SMOC2Q9H3U7 446 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 MEAF6Q9HAF1 191 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 CCDC167Q9P0B6 97 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 IPO11Q9UI26 975 aaKnown RBP13.19□□□□□ -0.3
PRAME-201ENST00000398741 CCDC160A6NGH7 325 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 E9PAM4 449 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 RNASEH2AO75792 299 aaKnown RBP13.19□□□□□ -0.3
PRAME-201ENST00000398741 RGS2P41220 211 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 SERPINH1P50454 418 aaKnown RBP13.19□□□□□ -0.3
PRAME-201ENST00000398741 TSPY1Q01534 308 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 LSAMPQ13449 338 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 TRIM25Q14258 630 aaKnown RBP13.19□□□□□ -0.3
PRAME-201ENST00000398741 SLC5A9Q2M3M2 681 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 ZNF789Q5FWF6 425 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 AGMOQ6ZNB7 445 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 CHSY3Q70JA7 882 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 LRRC49Q8IUZ0 686 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 RTL3Q8N8U3 475 aaKnown RBP13.19□□□□□ -0.3
PRAME-201ENST00000398741 HASPINQ8TF76 798 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 ATP6V1E2Q96A05 226 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 NMD3Q96D46 503 aaKnown RBP13.19□□□□□ -0.3
PRAME-201ENST00000398741 DGCR14Q96DF8 476 aaKnown RBP13.19□□□□□ -0.3
PRAME-201ENST00000398741 CACNA2D2Q9NY47 1150 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 PLK2Q9NYY3 685 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 MPP6Q9NZW5 540 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 CPA4Q9UI42 421 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 AP4S1Q9Y587 144 aa13.19□□□□□ -0.3
PRAME-201ENST00000398741 E7ENX8 843 aa13.18□□□□□ -0.3
PRAME-201ENST00000398741 STAMBPO95630 424 aa13.18□□□□□ -0.3
PRAME-201ENST00000398741 POMCP01189 267 aa13.18□□□□□ -0.3
PRAME-201ENST00000398741 MYCNP04198 464 aaPredicted RBP13.18□□□□□ -0.3
PRAME-201ENST00000398741 KCNA5P22460 613 aa13.18□□□□□ -0.3
PRAME-201ENST00000398741 GRIK1P39086 918 aa13.18□□□□□ -0.3
PRAME-201ENST00000398741 LEPRP48357 1165 aaKnown RBP13.18□□□□□ -0.3
PRAME-201ENST00000398741 CLCN2P51788 898 aa13.18□□□□□ -0.3
PRAME-201ENST00000398741 SLC5A3P53794 718 aa13.18□□□□□ -0.3
PRAME-201ENST00000398741 C1QTNF8P60827 252 aa13.18□□□□□ -0.3
PRAME-201ENST00000398741 PURAQ00577 322 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms