RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 PCCBP05166 539 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 MAXP61244 160 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 SAMD11Q96NU1 681 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 NDNQ99608 321 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 PTPRJQ12913 1337 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 DDX3XO00571 662 aaKnown RBP eCLIP14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 FFAR3O14843 346 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 GPR42O15529 346 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 ARL2P36404 184 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 POLD2P49005 469 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 MBTD1Q05BQ5 628 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 ECHDC2Q86YB7 292 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 BADQ92934 168 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 KAT5Q92993 513 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 NMD3Q96D46 503 aaKnown RBP14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 REXO4Q9GZR2 422 aaKnown RBP14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 C6orf62Q9GZU0 229 aaPredicted RBP14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 CHST7Q9NS84 486 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 ALKBH4Q9NXW9 302 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 MRPL39Q9NYK5 338 aaKnown RBP14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 PDE2AO00408 941 aaPredicted RBP14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 TRIM24O15164 1050 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 TLR5O60602 858 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 RNASEH2AO75792 299 aaKnown RBP14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 CATP04040 527 aaKnown RBP14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 ELFN1P0C7U0 828 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 COPZ1P61923 177 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 IFI35P80217 286 aaPredicted RBP14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 CCDC92Q53HC0 331 aaPredicted RBP14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 FAM35AQ86V20 835 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 SLC9A7Q96T83 725 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 IMP3Q9NV31 184 aaKnown RBP14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 ARHGAP28Q9P2N2 729 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 FGF10O15520 208 aaPredicted RBP14.33□□□□□ -0.11
PCDHA11-201ENST00000398640 EPN2O95208 641 aa14.33□□□□□ -0.11
PCDHA11-201ENST00000398640 CYP1A1P04798 512 aaPredicted RBP14.33□□□□□ -0.11
PCDHA11-201ENST00000398640 KDELR1P24390 212 aa14.33□□□□□ -0.11
PCDHA11-201ENST00000398640 R3HCC1LQ7Z5L2 792 aaKnown RBP14.33□□□□□ -0.11
PCDHA11-201ENST00000398640 CACTIN-AS1Q8N1I8 211 aa14.33□□□□□ -0.11
PCDHA11-201ENST00000398640 SELENOMQ8WWX9 145 aa14.33□□□□□ -0.11
PCDHA11-201ENST00000398640 TRIM8Q9BZR9 551 aa14.33□□□□□ -0.11
PCDHA11-201ENST00000398640 COQ6Q9Y2Z9 468 aa14.33□□□□□ -0.11
PCDHA11-201ENST00000398640 STRCQ7RTU9 1775 aa14.33□□□□□ -0.11
PCDHA11-201ENST00000398640 SMIM31A0A1B0GVY4 71 aa14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 HIST1H2ABP04908 130 aa14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 JAK1P23458 1154 aa14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 CASP5P51878 434 aa14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 ZNF135P52742 658 aaPredicted RBP14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 AP5B1Q2VPB7 878 aa14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 RSBN1Q5VWQ0 802 aaPredicted RBP14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 HIST3H2AQ7L7L0 130 aa14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 STK32CQ86UX6 486 aa14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 C2orf73Q8N5S3 287 aaPredicted RBP14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 HIST1H2ACQ93077 130 aa14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 RASGRP1O95267 797 aa14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 CLCNKBP51801 687 aa14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 ANKRD52Q8NB46 1076 aa14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 OR14C36Q8NHC7 312 aa14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 SLC35C1Q96A29 364 aa14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 HSFY1Q96LI6 401 aa14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 OLFM1Q99784 485 aa14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 THAP1Q9NVV9 213 aa14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 PTGES3LE9PB15 166 aa14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 DCXO43602 365 aa14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 SLC35G4P0C7Q5 338 aa14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 VSTM1Q6UX27 236 aa14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 SNX32Q86XE0 403 aa14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 IZUMO1Q8IYV9 350 aa14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 ZNF384Q8TF68 577 aa14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 OXNAD1Q96HP4 312 aaPredicted RBP14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 SCN11AQ9UI33 1791 aa14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 ADGRA3Q8IWK6 1321 aa14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 TSPAN8P19075 237 aa14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 CNGA2Q16280 664 aa14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 LRRC74BQ6ZQY2 392 aa14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 ZC3H7AQ8IWR0 971 aaKnown RBP14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 PRCCQ92733 491 aaPredicted RBP14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 REXO5Q96IC2 774 aaKnown RBP14.33□□□□□ -0.12
PCDHA11-201ENST00000398640 BTAF1O14981 1849 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 OR6B1O95007 311 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 C22orf31O95567 290 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 UQCRBP14927 111 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 PTPN4P29074 926 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 IRF8Q02556 426 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 RGS1Q08116 209 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 NEDD8Q15843 81 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 ZNF57Q68EA5 555 aaPredicted RBP14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 GPR156Q8NFN8 814 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 ITFG1Q8TB96 612 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 S100A13Q99584 98 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 MRPL45Q9BRJ2 306 aaKnown RBP14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 ZFP14Q9HCL3 533 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 DUS2Q9NX74 493 aaKnown RBP14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 CLIC5Q9NZA1 410 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 GUCY1B2O75343 617 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 EPHX1P07099 455 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 C8AP07357 584 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 MYL12AP19105 171 aa14.32□□□□□ -0.12
PCDHA11-201ENST00000398640 KPNB1Q14974 876 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms