RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 ATXN2Q99700 1313 aaKnown RBP14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 MOXD2PA6NHM9 499 aa14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 NDST3O95803 873 aa14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 GABRR2P28476 465 aa14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 CDC25CP30307 473 aa14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 KIAA0408Q6ZU52 694 aa14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 PYDC1Q8WXC3 89 aa14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 DTNBP1Q96EV8 351 aa14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 BORCS6Q96GS4 357 aa14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 PPP1R16AQ96I34 528 aa14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 CDH19Q9H159 772 aa14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 CHKBQ9Y259 395 aa14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 Q9Y3F1 56 aa14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 CICQ96RK0 1608 aaPredicted RBP14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 MATN3O15232 486 aa14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 EFCAB14O75071 495 aa14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 LAG3P18627 525 aa14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 TACR2P21452 398 aa14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 IRX1P78414 480 aaPredicted RBP14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 RSPH1Q8WYR4 309 aa14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 RNF145Q96MT1 663 aa14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 BCO2Q9BYV7 579 aa14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 LRMDAQ9H2I8 198 aa14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 COPG2Q9UBF2 871 aa14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 TBC1D3BA6NDS4 549 aa14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 AZIN1O14977 448 aa14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 HNRNPLP14866 589 aaKnown RBP eCLIP14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 CTNNB1P35222 781 aa14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 LIMK2P53671 638 aa14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 PSME3P61289 254 aa14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 IRGCQ6NXR0 463 aa14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 MAGEC3Q8TD91 643 aa14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 FUBP3Q96I24 572 aaKnown RBP eCLIP14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 PPP3R2Q96LZ3 170 aa14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 C7orf26Q96N11 449 aa14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 EIF2B3Q9NR50 452 aaKnown RBP14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 PNPOQ9NVS9 261 aa14.31□□□□□ -0.12
PCDHGA11-201ENST00000398587 GPR15P49685 360 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 GDF10P55107 478 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 USP4Q13107 963 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 HNRNPDQ14103 355 aaKnown RBP14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 VARS2Q5ST30 1063 aaKnown RBP14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 OTUD3Q5T2D3 398 aaPredicted RBP14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 GPRIN3Q6ZVF9 776 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 CYP4Z1Q86W10 505 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 RBFAQ8N0V3 343 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 SPATA6LQ8N4H0 392 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 ACTRT2Q8TDY3 377 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 ELMO1Q92556 727 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 NTAN1Q96AB6 310 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 C9orf16Q9BUW7 83 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 SNX6Q9UNH7 406 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 ULK1O75385 1050 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 TGDSO95455 350 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 ACADMP11310 421 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 HGFP14210 728 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 PPP2R1BP30154 601 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 MC4RP32245 332 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 PFKPQ01813 784 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 UBAP2LQ14157 1087 aaKnown RBP14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 CA9Q16790 459 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 PAGE2BQ5JRK9 111 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 SH3PXD2AQ5TCZ1 1133 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 CLNKQ7Z7G1 428 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 ALYREFQ86V81 257 aaKnown RBP14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 SLAIN1Q8ND83 568 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 MFSD3Q96ES6 412 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 NR1H4Q96RI1 486 aaPredicted RBP14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 COPS8Q99627 209 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 IGSF9Q9P2J2 1179 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 LEF1Q9UJU2 399 aaPredicted RBP14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 DOT1LQ8TEK3 1739 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 PDE4DIPQ5VU43 2346 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 KCNU1A8MYU2 1149 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 CLOCKO15516 846 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 ENTPD5O75356 428 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 CFHP08603 1231 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 TIGD5Q53EQ6 642 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 SYT12Q8IV01 421 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 RTL3Q8N8U3 475 aaKnown RBP14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 ZSCAN18Q8TBC5 510 aaPredicted RBP14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 CD99L2Q8TCZ2 262 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 BBS2Q9BXC9 721 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 CDV3Q9UKY7 258 aaKnown RBP14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 HBS1LQ9Y450 684 aaKnown RBP14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 MTF2Q9Y483 593 aaPredicted RBP14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 AHDC1Q5TGY3 1603 aaPredicted RBP14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 MAGEC1O60732 1142 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 RPP40O75818 363 aaKnown RBP14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 ZMPSTE24O75844 475 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 IL1R2P27930 398 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 CYP2A13Q16696 494 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 UPF1Q92900 1129 aaKnown RBP eCLIP14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 MARK4Q96L34 752 aa14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 KIAA1522Q9P206 1035 aaPredicted RBP14.3□□□□□ -0.12
PCDHGA11-201ENST00000398587 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.29□□□□□ -0.12
PCDHGA11-201ENST00000398587 ACSL4O60488 711 aa14.29□□□□□ -0.12
PCDHGA11-201ENST00000398587 OTCP00480 354 aa14.29□□□□□ -0.12
PCDHGA11-201ENST00000398587 C1RP00736 705 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms