RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 LYSMD4Q5XG99 296 aa25.58■■□□□ 1.69
TMEM55B-202ENST00000398020 LAIR1Q6GTX8 287 aa25.58■■□□□ 1.69
TMEM55B-202ENST00000398020 BRAT1Q6PJG6 821 aa25.58■■□□□ 1.69
TMEM55B-202ENST00000398020 SPATA22Q8NHS9 363 aa25.58■■□□□ 1.69
TMEM55B-202ENST00000398020 USP29Q9HBJ7 922 aa25.58■■□□□ 1.69
TMEM55B-202ENST00000398020 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.58■■□□□ 1.69
TMEM55B-202ENST00000398020 ZBTB32Q9Y2Y4 487 aaPredicted RBP25.58■■□□□ 1.69
TMEM55B-202ENST00000398020 FADS3Q9Y5Q0 445 aa25.58■■□□□ 1.69
TMEM55B-202ENST00000398020 TSPAN11A1L157 253 aa25.58■■□□□ 1.68
TMEM55B-202ENST00000398020 METTL12A8MUP2 240 aa25.58■■□□□ 1.68
TMEM55B-202ENST00000398020 ZNF185O15231 689 aa25.58■■□□□ 1.68
TMEM55B-202ENST00000398020 HTRA2O43464 458 aaPredicted RBP25.58■■□□□ 1.68
TMEM55B-202ENST00000398020 LIASO43766 372 aa25.58■■□□□ 1.68
TMEM55B-202ENST00000398020 SOCS5O75159 536 aa25.58■■□□□ 1.68
TMEM55B-202ENST00000398020 PCDH8O95206 1070 aa25.58■■□□□ 1.68
TMEM55B-202ENST00000398020 NFKB1P19838 968 aa25.58■■□□□ 1.68
TMEM55B-202ENST00000398020 CES1P23141 567 aa25.58■■□□□ 1.68
TMEM55B-202ENST00000398020 SPDYCQ5MJ68 293 aa25.58■■□□□ 1.68
TMEM55B-202ENST00000398020 KIAA0895LQ68EN5 471 aa25.58■■□□□ 1.68
TMEM55B-202ENST00000398020 FAM71DQ8N9W8 422 aa25.58■■□□□ 1.68
TMEM55B-202ENST00000398020 FOXJ1Q92949 421 aa25.58■■□□□ 1.68
TMEM55B-202ENST00000398020 IMP4Q96G21 291 aaKnown RBP25.58■■□□□ 1.68
TMEM55B-202ENST00000398020 FERMT1Q9BQL6 677 aa25.58■■□□□ 1.68
TMEM55B-202ENST00000398020 UBP1Q9NZI7 540 aa25.58■■□□□ 1.68
TMEM55B-202ENST00000398020 NEMP1O14524 444 aa25.57■■□□□ 1.68
TMEM55B-202ENST00000398020 IGHV4-34P06331 123 aa25.57■■□□□ 1.68
TMEM55B-202ENST00000398020 PDHA1P08559 390 aa25.57■■□□□ 1.68
TMEM55B-202ENST00000398020 MAT2AP31153 395 aaKnown RBP25.57■■□□□ 1.68
TMEM55B-202ENST00000398020 SKOR1P84550 965 aa25.57■■□□□ 1.68
TMEM55B-202ENST00000398020 CCDC6Q16204 474 aa25.57■■□□□ 1.68
TMEM55B-202ENST00000398020 ASCL5Q7RTU5 278 aa25.57■■□□□ 1.68
TMEM55B-202ENST00000398020 PRPF39Q86UA1 669 aaKnown RBP25.57■■□□□ 1.68
TMEM55B-202ENST00000398020 RGL4Q8IZJ4 473 aa25.57■■□□□ 1.68
TMEM55B-202ENST00000398020 RASGEF1CQ8N431 466 aa25.57■■□□□ 1.68
TMEM55B-202ENST00000398020 HCAR2Q8TDS4 363 aa25.57■■□□□ 1.68
TMEM55B-202ENST00000398020 VAT1Q99536 393 aa25.57■■□□□ 1.68
TMEM55B-202ENST00000398020 NAPGQ99747 312 aaPredicted RBP25.57■■□□□ 1.68
TMEM55B-202ENST00000398020 SLC25A51Q9H1U9 297 aa25.57■■□□□ 1.68
TMEM55B-202ENST00000398020 KDM4CQ9H3R0 1056 aa25.57■■□□□ 1.68
TMEM55B-202ENST00000398020 PCDH12Q9NPG4 1184 aa25.57■■□□□ 1.68
TMEM55B-202ENST00000398020 TNRC6BQ9UPQ9 1833 aaKnown RBP25.56■■□□□ 1.68
TMEM55B-202ENST00000398020 UPK3BL1B0FP48 263 aa25.56■■□□□ 1.68
TMEM55B-202ENST00000398020 UPK3BL2E5RIL1 263 aa25.56■■□□□ 1.68
TMEM55B-202ENST00000398020 RNGTTO60942 597 aaKnown RBP25.56■■□□□ 1.68
TMEM55B-202ENST00000398020 MT-CYBP00156 380 aaPredicted RBP25.56■■□□□ 1.68
TMEM55B-202ENST00000398020 GDF10P55107 478 aa25.56■■□□□ 1.68
TMEM55B-202ENST00000398020 CYP2U1Q7Z449 544 aa25.56■■□□□ 1.68
TMEM55B-202ENST00000398020 CCDC110Q8TBZ0 833 aa25.56■■□□□ 1.68
TMEM55B-202ENST00000398020 PIGKQ92643 395 aa25.56■■□□□ 1.68
TMEM55B-202ENST00000398020 RAB7BQ96AH8 199 aa25.56■■□□□ 1.68
TMEM55B-202ENST00000398020 TDRD1Q9BXT4 1180 aaKnown RBP25.56■■□□□ 1.68
TMEM55B-202ENST00000398020 ARRDC1-AS1Q9H2J1 176 aa25.56■■□□□ 1.68
TMEM55B-202ENST00000398020 PREBQ9HCU5 417 aa25.56■■□□□ 1.68
TMEM55B-202ENST00000398020 TMEM74BQ9NUR3 256 aa25.56■■□□□ 1.68
TMEM55B-202ENST00000398020 EIF2B4Q9UI10 523 aaKnown RBP25.56■■□□□ 1.68
TMEM55B-202ENST00000398020 CHKBQ9Y259 395 aa25.56■■□□□ 1.68
TMEM55B-202ENST00000398020 AREL1O15033 823 aa25.55■■□□□ 1.68
TMEM55B-202ENST00000398020 PGLSO95336 258 aa25.55■■□□□ 1.68
TMEM55B-202ENST00000398020 CPP00450 1065 aa25.55■■□□□ 1.68
TMEM55B-202ENST00000398020 ANKRD20A2Q5SQ80 823 aa25.55■■□□□ 1.68
TMEM55B-202ENST00000398020 ARMC12Q5T9G4 340 aa25.55■■□□□ 1.68
TMEM55B-202ENST00000398020 ANKRD20A1Q5TYW2 823 aa25.55■■□□□ 1.68
TMEM55B-202ENST00000398020 ANKRD20A3Q5VUR7 823 aa25.55■■□□□ 1.68
TMEM55B-202ENST00000398020 SEL1L3Q68CR1 1132 aa25.55■■□□□ 1.68
TMEM55B-202ENST00000398020 KDELC2Q7Z4H8 507 aa25.55■■□□□ 1.68
TMEM55B-202ENST00000398020 KLK6Q92876 244 aa25.55■■□□□ 1.68
TMEM55B-202ENST00000398020 MIR1-1HGQ9H1L0 117 aa25.55■■□□□ 1.68
TMEM55B-202ENST00000398020 PCED1AQ9H1Q7 454 aa25.55■■□□□ 1.68
TMEM55B-202ENST00000398020 RSPH14Q9UHP6 348 aa25.55■■□□□ 1.68
TMEM55B-202ENST00000398020 TRHDEQ9UKU6 1024 aa25.55■■□□□ 1.68
TMEM55B-202ENST00000398020 SLCO1B1Q9Y6L6 691 aa25.55■■□□□ 1.68
TMEM55B-202ENST00000398020 A0A1W2PQU0 124 aa25.55■■□□□ 1.68
TMEM55B-202ENST00000398020 CTAGE9A4FU28 777 aa25.55■■□□□ 1.68
TMEM55B-202ENST00000398020 STK10O94804 968 aaKnown RBP25.55■■□□□ 1.68
TMEM55B-202ENST00000398020 EPN2O95208 641 aa25.55■■□□□ 1.68
TMEM55B-202ENST00000398020 PTPRRQ15256 657 aa25.55■■□□□ 1.68
TMEM55B-202ENST00000398020 OASLQ15646 514 aaKnown RBP25.55■■□□□ 1.68
TMEM55B-202ENST00000398020 PCSK7Q16549 785 aa25.55■■□□□ 1.68
TMEM55B-202ENST00000398020 HS1BP3Q53T59 392 aa25.55■■□□□ 1.68
TMEM55B-202ENST00000398020 SYCP2LQ5T4T6 812 aa25.55■■□□□ 1.68
TMEM55B-202ENST00000398020 MAIP1Q8WWC4 291 aa25.55■■□□□ 1.68
TMEM55B-202ENST00000398020 WRAP53Q9BUR4 548 aaKnown RBP25.55■■□□□ 1.68
TMEM55B-202ENST00000398020 AP1M1Q9BXS5 423 aa25.55■■□□□ 1.68
TMEM55B-202ENST00000398020 EBF2Q9HAK2 575 aa25.55■■□□□ 1.68
TMEM55B-202ENST00000398020 NCDNQ9UBB6 729 aa25.55■■□□□ 1.68
TMEM55B-202ENST00000398020 GMEB2Q9UKD1 530 aa25.55■■□□□ 1.68
TMEM55B-202ENST00000398020 ZFR2Q9UPR6 939 aaKnown RBP25.55■■□□□ 1.68
TMEM55B-202ENST00000398020 ZNF148Q9UQR1 794 aa25.55■■□□□ 1.68
TMEM55B-202ENST00000398020 ZKSCAN5Q9Y2L8 839 aa25.55■■□□□ 1.68
TMEM55B-202ENST00000398020 DOCK9Q9BZ29 2069 aa25.54■■□□□ 1.68
TMEM55B-202ENST00000398020 OTOGLQ3ZCN5 2332 aa25.54■■□□□ 1.68
TMEM55B-202ENST00000398020 A8MX80 341 aa25.54■■□□□ 1.68
TMEM55B-202ENST00000398020 AP1G1O43747 822 aa25.54■■□□□ 1.68
TMEM55B-202ENST00000398020 POLR2LP62875 67 aaKnown RBP25.54■■□□□ 1.68
TMEM55B-202ENST00000398020 FAM193AP78312 1265 aa25.54■■□□□ 1.68
TMEM55B-202ENST00000398020 LOXL4Q96JB6 756 aa25.54■■□□□ 1.68
TMEM55B-202ENST00000398020 SMIM14Q96QK8 99 aa25.54■■□□□ 1.68
TMEM55B-202ENST00000398020 FRMD8P1Q9BZ68 369 aaPredicted RBP25.54■■□□□ 1.68
TMEM55B-202ENST00000398020 C10orf142B7Z368 130 aa25.53■■□□□ 1.68
TMEM55B-202ENST00000398020 PGRMC1O00264 195 aaKnown RBP25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms