RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 GBA3Q9H227 469 aa11.19□□□□□ -0.62
CSGALNACT1-202ENST00000397998 NDFIP2Q9NV92 336 aa11.19□□□□□ -0.62
CSGALNACT1-202ENST00000397998 TBC1D13Q9NVG8 400 aa11.19□□□□□ -0.62
CSGALNACT1-202ENST00000397998 TRNAU1APQ9NX07 287 aaKnown RBP11.19□□□□□ -0.62
CSGALNACT1-202ENST00000397998 CNOT6Q9ULM6 557 aaKnown RBP11.19□□□□□ -0.62
CSGALNACT1-202ENST00000397998 ANKRD12Q6UB98 2062 aa11.19□□□□□ -0.62
CSGALNACT1-202ENST00000397998 CASTOR2A6NHX0 329 aa11.19□□□□□ -0.62
CSGALNACT1-202ENST00000397998 GOLGA8CPA6NN73 597 aa11.19□□□□□ -0.62
CSGALNACT1-202ENST00000397998 SYNCRIPO60506 623 aaKnown RBP11.19□□□□□ -0.62
CSGALNACT1-202ENST00000397998 SOAT2O75908 522 aa11.19□□□□□ -0.62
CSGALNACT1-202ENST00000397998 AHSGP02765 367 aa11.19□□□□□ -0.62
CSGALNACT1-202ENST00000397998 DNAJB2P25686 324 aa11.19□□□□□ -0.62
CSGALNACT1-202ENST00000397998 YWHAQP27348 245 aa11.19□□□□□ -0.62
CSGALNACT1-202ENST00000397998 SLC7A1P30825 629 aa11.19□□□□□ -0.62
CSGALNACT1-202ENST00000397998 GRM5P41594 1212 aa11.19□□□□□ -0.62
CSGALNACT1-202ENST00000397998 IL5RAQ01344 420 aa11.19□□□□□ -0.62
CSGALNACT1-202ENST00000397998 RHDQ02161 417 aa11.19□□□□□ -0.62
CSGALNACT1-202ENST00000397998 MYBPC3Q14896 1274 aa11.19□□□□□ -0.62
CSGALNACT1-202ENST00000397998 TARBP2Q15633 366 aaKnown RBP11.19□□□□□ -0.62
CSGALNACT1-202ENST00000397998 C9orf57Q5W0N0 161 aa11.19□□□□□ -0.62
CSGALNACT1-202ENST00000397998 ANGPTL8Q6UXH0 198 aa11.19□□□□□ -0.62
CSGALNACT1-202ENST00000397998 SFRP1Q8N474 314 aa11.19□□□□□ -0.62
CSGALNACT1-202ENST00000397998 SLC10A4Q96EP9 437 aa11.19□□□□□ -0.62
CSGALNACT1-202ENST00000397998 C1orf50Q9BV19 199 aa11.19□□□□□ -0.62
CSGALNACT1-202ENST00000397998 VPS45Q9NRW7 570 aa11.19□□□□□ -0.62
CSGALNACT1-202ENST00000397998 UBAP1Q9NZ09 502 aa11.19□□□□□ -0.62
CSGALNACT1-202ENST00000397998 PHF24Q9UPV7 400 aa11.19□□□□□ -0.62
CSGALNACT1-202ENST00000397998 PENKP01210 267 aaPredicted RBP11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 PIRTP0C851 137 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 CDH3P22223 829 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 DGCR6Q14129 220 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 NR6A1Q15406 480 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 MARC1Q5VT66 337 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 ANKS6Q68DC2 871 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 TRNP1Q6NT89 227 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 MIB1Q86YT6 1006 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 FAM126BQ8IXS8 530 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 CLYBLQ8N0X4 340 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 LRRC52Q8N7C0 313 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 FBXO30Q8TB52 745 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.18□□□□□ -0.622e-7■■■■■ 62.8
CSGALNACT1-202ENST00000397998 DUSP16Q9BY84 665 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 DDX28Q9NUL7 540 aaKnown RBP11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 LMCD1Q9NZU5 365 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 LIMD1Q9UGP4 676 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 SMCHD1A6NHR9 2005 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 A0A0J9YVX5 310 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 COL6A2P12110 1019 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 NCK1P16333 377 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 UGT1A6P19224 532 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 BDNFP23560 247 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 GLUD2P49448 558 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 CDKL1Q00532 357 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 NIPAL4Q0D2K0 466 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 BNIP3Q12983 259 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 SNAPC2Q13487 334 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 POLD3Q15054 466 aaPredicted RBP11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 FAM98BQ52LJ0 330 aaKnown RBP11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 GPR158Q5T848 1215 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 EGFLAMQ63HQ2 1017 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 TIGD7Q6NT04 549 aaPredicted RBP11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 PGM2L1Q6PCE3 622 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 ZC3HC1Q86WB0 502 aaKnown RBP11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 ZDHHC13Q8IUH4 622 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 CEP19Q96LK0 163 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 PPP1R2P1Q96PQ5 205 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 TBCDQ9BTW9 1192 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 EIF2AQ9BY44 585 aaKnown RBP11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 PRDM16Q9HAZ2 1276 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 AFF4Q9UHB7 1163 aaKnown RBP11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 VWA7Q9Y334 891 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 TNPO2O14787 897 aaKnown RBP11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 SPTLC1O15269 473 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 SNAP91O60641 907 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 LRIG2O94898 1065 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 PSMB9P28065 219 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 CHRNA4P43681 627 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 SERPINH1P50454 418 aaKnown RBP11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 DAB2P98082 770 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 MYBPC1Q00872 1141 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 SFSWAPQ12872 951 aaKnown RBP11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 TSTA3Q13630 321 aaPredicted RBP11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 ITGA7Q13683 1181 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 VGLL4Q14135 290 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 ZNF423Q2M1K9 1284 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 TIGD2Q4W5G0 525 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 TMTC4Q5T4D3 741 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 ZNF280DQ6N043 979 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 LBX2Q6XYB7 198 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 ITFG1Q8TB96 612 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 CASP10Q92851 521 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 HDAC10Q969S8 669 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 EMID1Q96A84 441 aaPredicted RBP11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 C19orf60Q96EN9 201 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 SENP8Q96LD8 212 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 FAM193BQ96PV7 902 aaPredicted RBP11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 HAPLN3Q96S86 360 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 RUBCNLQ9H714 662 aa11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 FBRSL1Q9HCM7 1045 aaKnown RBP11.18□□□□□ -0.62
CSGALNACT1-202ENST00000397998 DGKBQ9Y6T7 804 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms