RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 PSMD5Q16401 504 aa18.5■□□□□ 0.55
CHRFAM7A-202ENST00000397827 SNX32Q86XE0 403 aa18.5■□□□□ 0.55
CHRFAM7A-202ENST00000397827 CATSPER2Q96P56 530 aa18.5■□□□□ 0.55
CHRFAM7A-202ENST00000397827 GMIPQ9P107 970 aa18.5■□□□□ 0.55
CHRFAM7A-202ENST00000397827 DNAJB4Q9UDY4 337 aa18.5■□□□□ 0.55
CHRFAM7A-202ENST00000397827 FNDC1Q4ZHG4 1894 aaPredicted RBP18.5■□□□□ 0.55
CHRFAM7A-202ENST00000397827 COL6A2P12110 1019 aa18.5■□□□□ 0.55
CHRFAM7A-202ENST00000397827 NUDT2P50583 147 aa18.5■□□□□ 0.55
CHRFAM7A-202ENST00000397827 CSHL1Q14406 222 aa18.5■□□□□ 0.55
CHRFAM7A-202ENST00000397827 EML3Q32P44 896 aa18.5■□□□□ 0.55
CHRFAM7A-202ENST00000397827 KDELC1Q6UW63 502 aa18.5■□□□□ 0.55
CHRFAM7A-202ENST00000397827 MON1AQ86VX9 555 aa18.5■□□□□ 0.55
CHRFAM7A-202ENST00000397827 NUP93Q8N1F7 819 aa18.5■□□□□ 0.55
CHRFAM7A-202ENST00000397827 TXNDC5Q8NBS9 432 aaKnown RBP18.5■□□□□ 0.55
CHRFAM7A-202ENST00000397827 SLC12A2P55011 1212 aa18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 TBX4P57082 545 aa18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 DSC2Q02487 901 aa18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 MS4A13Q5J8X5 152 aa18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 CLLU1OSQ5K130 101 aa18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 KIAA0930Q6ICG6 404 aaPredicted RBP18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 GLB1LQ6UWU2 654 aa18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 LDB1Q86U70 411 aaPredicted RBP18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 MIB1Q86YT6 1006 aa18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 FBXW8Q8N3Y1 598 aa18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 ATAD1Q8NBU5 361 aa18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 PTCD2Q8WV60 388 aaKnown RBP18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 OLFM1Q99784 485 aa18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 RTKNQ9BST9 563 aa18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 FAM192AQ9GZU8 254 aa18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 TBC1D13Q9NVG8 400 aa18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 TLR6Q9Y2C9 796 aa18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 FIS1Q9Y3D6 152 aa18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 CPB1P15086 417 aa18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 ELNP15502 786 aa18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 FCGRTP55899 365 aa18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 CAP1Q01518 475 aa18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 ASPHQ12797 758 aa18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 RPS27LQ71UM5 84 aaKnown RBP18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 PSMG2Q969U7 264 aa18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 SLC39A13Q96H72 371 aa18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 B3GALT6Q96L58 329 aa18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 SLX1AQ9BQ83 275 aa18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 SLC25A51Q9H1U9 297 aa18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 MRPL46Q9H2W6 279 aaKnown RBP18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 POMKQ9H5K3 350 aa18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 MRM3Q9HC36 420 aaKnown RBP18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 CYP4F12Q9HCS2 524 aa18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 MIA3Q5JRA6 1907 aa18.49■□□□□ 0.55
CHRFAM7A-202ENST00000397827 HMBSP08397 361 aa18.48■□□□□ 0.55
CHRFAM7A-202ENST00000397827 HNRNPLP14866 589 aaKnown RBP eCLIP18.48■□□□□ 0.55
CHRFAM7A-202ENST00000397827 CRABP2P29373 138 aa18.48■□□□□ 0.55
CHRFAM7A-202ENST00000397827 PRDX6P30041 224 aa18.48■□□□□ 0.55
CHRFAM7A-202ENST00000397827 TRIM71Q2Q1W2 868 aaKnown RBP18.48■□□□□ 0.55
CHRFAM7A-202ENST00000397827 CCSAPQ6IQ19 270 aaPredicted RBP18.48■□□□□ 0.55
CHRFAM7A-202ENST00000397827 PTAR1Q7Z6K3 402 aaPredicted RBP18.48■□□□□ 0.55
CHRFAM7A-202ENST00000397827 CIR1Q86X95 450 aaPredicted RBP18.48■□□□□ 0.55
CHRFAM7A-202ENST00000397827 CCDC117Q8IWD4 279 aaPredicted RBP18.48■□□□□ 0.55
CHRFAM7A-202ENST00000397827 SCML2Q9UQR0 700 aa18.48■□□□□ 0.55
CHRFAM7A-202ENST00000397827 ARHGEF37A1IGU5 675 aa18.48■□□□□ 0.55
CHRFAM7A-202ENST00000397827 GJB3O75712 270 aa18.48■□□□□ 0.55
CHRFAM7A-202ENST00000397827 RPLP2P05387 115 aaKnown RBP18.48■□□□□ 0.55
CHRFAM7A-202ENST00000397827 DSG1Q02413 1049 aa18.48■□□□□ 0.55
CHRFAM7A-202ENST00000397827 HNRNPDQ14103 355 aaKnown RBP18.48■□□□□ 0.55
CHRFAM7A-202ENST00000397827 AAGABQ6PD74 315 aa18.48■□□□□ 0.55
CHRFAM7A-202ENST00000397827 ACAD11Q709F0 780 aa18.48■□□□□ 0.55
CHRFAM7A-202ENST00000397827 KLHDC9Q8NEP7 349 aa18.48■□□□□ 0.55
CHRFAM7A-202ENST00000397827 IMP4Q96G21 291 aaKnown RBP18.48■□□□□ 0.55
CHRFAM7A-202ENST00000397827 C1orf74Q96LT6 269 aa18.48■□□□□ 0.55
CHRFAM7A-202ENST00000397827 DDX50Q9BQ39 737 aaKnown RBP18.48■□□□□ 0.55
CHRFAM7A-202ENST00000397827 CDYLQ9Y232 598 aa18.48■□□□□ 0.55
CHRFAM7A-202ENST00000397827 MAGEA13PA6NCF6 341 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 HNRNPRO43390 633 aaKnown RBP18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 BUD23O43709 281 aaKnown RBP18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 SLC10A3P09131 477 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 ETFBP38117 255 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 RENBPP51606 427 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 MTTPP55157 894 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 ARPP19P56211 112 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 NSUN2Q08J23 767 aaKnown RBP eCLIP18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 CDC16Q13042 620 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 SH2D4BQ5SQS7 431 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 MARC1Q5VT66 337 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 LPCAT4Q643R3 524 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 DHDDSQ86SQ9 333 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 ZNF683Q8IZ20 524 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 IGSF8Q969P0 613 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 ZYG11BQ9C0D3 744 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 ADAMTS6Q9UKP5 1117 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 HEATR9A2RTY3 570 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 OAZ2O95190 189 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 SPATA31D3P0C874 917 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 THRAP10827 490 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 PRKAR2AP13861 404 aaKnown RBP18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 ETS2P15036 469 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 KCNA5P22460 613 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 SERPINH1P50454 418 aaKnown RBP18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 PLK1P53350 603 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 PRKAA2P54646 552 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 FAM219BQ5XKK7 198 aa18.47■□□□□ 0.55
CHRFAM7A-202ENST00000397827 RAP1GAP2Q684P5 730 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms