RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 SLC25A41Q8N5S1 370 aa19.65■□□□□ 0.74
PDLIM2-205ENST00000397761 TERB1Q8NA31 727 aa19.65■□□□□ 0.74
PDLIM2-205ENST00000397761 FRS2Q8WU20 508 aa19.65■□□□□ 0.74
PDLIM2-205ENST00000397761 SPOCK2Q92563 424 aa19.65■□□□□ 0.74
PDLIM2-205ENST00000397761 ARL8AQ96BM9 186 aa19.65■□□□□ 0.74
PDLIM2-205ENST00000397761 TUBGCP5Q96RT8 1024 aa19.65■□□□□ 0.74
PDLIM2-205ENST00000397761 CPEB1Q9BZB8 566 aaKnown RBP19.65■□□□□ 0.74
PDLIM2-205ENST00000397761 ELOVL2Q9NXB9 296 aa19.65■□□□□ 0.74
PDLIM2-205ENST00000397761 LGALS13Q9UHV8 139 aa19.65■□□□□ 0.74
PDLIM2-205ENST00000397761 SLC24A2Q9UI40 661 aa19.65■□□□□ 0.74
PDLIM2-205ENST00000397761 TCAF1Q9Y4C2 921 aa19.65■□□□□ 0.74
PDLIM2-205ENST00000397761 RPS6KL1Q9Y6S9 549 aa19.65■□□□□ 0.74
PDLIM2-205ENST00000397761 UNC80Q8N2C7 3258 aa19.65■□□□□ 0.74
PDLIM2-205ENST00000397761 XIRP2A4UGR9 3374 aa19.65■□□□□ 0.74
PDLIM2-205ENST00000397761 F5P12259 2224 aa19.65■□□□□ 0.74
PDLIM2-205ENST00000397761 CUL9Q8IWT3 2517 aa19.64■□□□□ 0.73
PDLIM2-205ENST00000397761 GOLGA6L10A6NI86 522 aa19.64■□□□□ 0.73
PDLIM2-205ENST00000397761 FAM159BA6NKW6 160 aa19.64■□□□□ 0.73
PDLIM2-205ENST00000397761 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.64■□□□□ 0.73
PDLIM2-205ENST00000397761 TRAFD1O14545 582 aaPredicted RBP19.64■□□□□ 0.73
PDLIM2-205ENST00000397761 POU6F1Q14863 301 aa19.64■□□□□ 0.73
PDLIM2-205ENST00000397761 CARD16Q5EG05 197 aa19.64■□□□□ 0.73
PDLIM2-205ENST00000397761 AGBL2Q5U5Z8 902 aa19.64■□□□□ 0.73
PDLIM2-205ENST00000397761 RIBC1Q8N443 379 aaPredicted RBP19.64■□□□□ 0.73
PDLIM2-205ENST00000397761 NXPE3Q969Y0 559 aa19.64■□□□□ 0.73
PDLIM2-205ENST00000397761 ZBTB9Q96C00 473 aa19.64■□□□□ 0.73
PDLIM2-205ENST00000397761 FCRL3Q96P31 734 aaPredicted RBP19.64■□□□□ 0.73
PDLIM2-205ENST00000397761 TNKS2Q9H2K2 1166 aa19.64■□□□□ 0.73
PDLIM2-205ENST00000397761 TRPV5Q9NQA5 729 aa19.64■□□□□ 0.73
PDLIM2-205ENST00000397761 CHRAC1Q9NRG0 131 aa19.64■□□□□ 0.73
PDLIM2-205ENST00000397761 VPS18Q9P253 973 aa19.64■□□□□ 0.73
PDLIM2-205ENST00000397761 EVLQ9UI08 416 aaPredicted RBP19.64■□□□□ 0.73
PDLIM2-205ENST00000397761 CHKBQ9Y259 395 aa19.64■□□□□ 0.73
PDLIM2-205ENST00000397761 PCDHGC4Q9Y5F7 938 aa19.64■□□□□ 0.73
PDLIM2-205ENST00000397761 HEATR9A2RTY3 570 aa19.63■□□□□ 0.73
PDLIM2-205ENST00000397761 MROH6A6NGR9 719 aa19.63■□□□□ 0.73
PDLIM2-205ENST00000397761 C2CD4DB7Z1M9 353 aa19.63■□□□□ 0.73
PDLIM2-205ENST00000397761 WASH3PC4AMC7 463 aa19.63■□□□□ 0.73
PDLIM2-205ENST00000397761 GOLGA8KD6RF30 607 aa19.63■□□□□ 0.73
PDLIM2-205ENST00000397761 CDH16O75309 829 aa19.63■□□□□ 0.73
PDLIM2-205ENST00000397761 PAPSS2O95340 614 aaPredicted RBP19.63■□□□□ 0.73
PDLIM2-205ENST00000397761 PDHA1P08559 390 aa19.63■□□□□ 0.73
PDLIM2-205ENST00000397761 RPL26P61254 145 aaKnown RBP19.63■□□□□ 0.73
PDLIM2-205ENST00000397761 MYLK3Q32MK0 819 aa19.63■□□□□ 0.73
PDLIM2-205ENST00000397761 KBTBD12Q3ZCT8 623 aa19.63■□□□□ 0.73
PDLIM2-205ENST00000397761 TTMPQ5BVD1 217 aa19.63■□□□□ 0.73
PDLIM2-205ENST00000397761 TRMT10BQ6PF06 316 aaKnown RBP19.63■□□□□ 0.73
PDLIM2-205ENST00000397761 GOLGA6L1Q8N7Z2 621 aa19.63■□□□□ 0.73
PDLIM2-205ENST00000397761 PPHLN1Q8NEY8 458 aaKnown RBP19.63■□□□□ 0.73
PDLIM2-205ENST00000397761 CYB5D2Q8WUJ1 264 aa19.63■□□□□ 0.73
PDLIM2-205ENST00000397761 SORCS1Q8WY21 1168 aa19.63■□□□□ 0.73
PDLIM2-205ENST00000397761 ADGRE3Q9BY15 652 aa19.63■□□□□ 0.73
PDLIM2-205ENST00000397761 TREX1Q9NSU2 369 aa19.63■□□□□ 0.73
PDLIM2-205ENST00000397761 RPL26L1Q9UNX3 145 aaKnown RBP19.63■□□□□ 0.73
PDLIM2-205ENST00000397761 PGLSO95336 258 aa19.62■□□□□ 0.73
PDLIM2-205ENST00000397761 POP4O95707 220 aaKnown RBP19.62■□□□□ 0.73
PDLIM2-205ENST00000397761 NMBRP28336 390 aa19.62■□□□□ 0.73
PDLIM2-205ENST00000397761 NNMTP40261 264 aa19.62■□□□□ 0.73
PDLIM2-205ENST00000397761 KDSRQ06136 332 aa19.62■□□□□ 0.73
PDLIM2-205ENST00000397761 GALNT3Q14435 633 aa19.62■□□□□ 0.73
PDLIM2-205ENST00000397761 GRM3Q14832 879 aa19.62■□□□□ 0.73
PDLIM2-205ENST00000397761 CCDC85BQ15834 202 aaPredicted RBP19.62■□□□□ 0.73
PDLIM2-205ENST00000397761 NLRP9Q7RTR0 991 aa19.62■□□□□ 0.73
PDLIM2-205ENST00000397761 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.62■□□□□ 0.73
PDLIM2-205ENST00000397761 OR2A12Q8NGT7 310 aa19.62■□□□□ 0.73
PDLIM2-205ENST00000397761 PEX13Q92968 403 aa19.62■□□□□ 0.73
PDLIM2-205ENST00000397761 ZNF669Q96BR6 464 aaPredicted RBP19.62■□□□□ 0.73
PDLIM2-205ENST00000397761 MFSD3Q96ES6 412 aa19.62■□□□□ 0.73
PDLIM2-205ENST00000397761 ATP6V1G3Q96LB4 118 aa19.62■□□□□ 0.73
PDLIM2-205ENST00000397761 CIPCQ9C0C6 399 aa19.62■□□□□ 0.73
PDLIM2-205ENST00000397761 ATP13A3Q9H7F0 1226 aa19.62■□□□□ 0.73
PDLIM2-205ENST00000397761 BRD9Q9H8M2 597 aa19.62■□□□□ 0.73
PDLIM2-205ENST00000397761 OGFRQ9NZT2 677 aa19.62■□□□□ 0.73
PDLIM2-205ENST00000397761 RIMKLBQ9ULI2 386 aa19.62■□□□□ 0.73
PDLIM2-205ENST00000397761 SPTBN5Q9NRC6 3674 aaKnown RBP19.62■□□□□ 0.73
PDLIM2-205ENST00000397761 ANKRD66B4E2M5 251 aa19.61■□□□□ 0.73
PDLIM2-205ENST00000397761 LDB2O43679 373 aa19.61■□□□□ 0.73
PDLIM2-205ENST00000397761 PSMA3P25788 255 aa19.61■□□□□ 0.73
PDLIM2-205ENST00000397761 CCNHP51946 323 aaPredicted RBP19.61■□□□□ 0.73
PDLIM2-205ENST00000397761 LAMB3Q13751 1172 aa19.61■□□□□ 0.73
PDLIM2-205ENST00000397761 EFTUD2Q15029 972 aaKnown RBP eCLIP19.61■□□□□ 0.736e-8■■■■□ 20.2
PDLIM2-205ENST00000397761 SMAD2Q15796 467 aaKnown RBP19.61■□□□□ 0.73
PDLIM2-205ENST00000397761 AAK1Q2M2I8 961 aa19.61■□□□□ 0.73
PDLIM2-205ENST00000397761 PREPLQ4J6C6 727 aaPredicted RBP19.61■□□□□ 0.73
PDLIM2-205ENST00000397761 NAIF1Q69YI7 327 aaPredicted RBP19.61■□□□□ 0.73
PDLIM2-205ENST00000397761 ADGRD1Q6QNK2 874 aa19.61■□□□□ 0.73
PDLIM2-205ENST00000397761 DPY19L3Q6ZPD9 716 aa19.61■□□□□ 0.73
PDLIM2-205ENST00000397761 CAMK1DQ8IU85 385 aa19.61■□□□□ 0.73
PDLIM2-205ENST00000397761 KRT222Q8N1A0 295 aa19.61■□□□□ 0.73
PDLIM2-205ENST00000397761 PLCD3Q8N3E9 789 aa19.61■□□□□ 0.73
PDLIM2-205ENST00000397761 BRSK1Q8TDC3 778 aa19.61■□□□□ 0.73
PDLIM2-205ENST00000397761 SLC44A1Q8WWI5 657 aa19.61■□□□□ 0.73
PDLIM2-205ENST00000397761 TLCD1Q96CP7 247 aa19.61■□□□□ 0.73
PDLIM2-205ENST00000397761 ECHDC3Q96DC8 303 aa19.61■□□□□ 0.73
PDLIM2-205ENST00000397761 CERS2Q96G23 380 aa19.61■□□□□ 0.73
PDLIM2-205ENST00000397761 ZNF778Q96MU6 729 aa19.61■□□□□ 0.73
PDLIM2-205ENST00000397761 PHF7Q9BWX1 381 aaPredicted RBP19.61■□□□□ 0.73
PDLIM2-205ENST00000397761 SMYD2Q9NRG4 433 aa19.61■□□□□ 0.73
PDLIM2-205ENST00000397761 TLDC2A0PJX2 215 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 TTC34A8MYJ7 566 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms