RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 NAPEPLDQ6IQ20 393 aa19.53■□□□□ 0.72
PDLIM2-204ENST00000397760 IPMKQ8NFU5 416 aa19.53■□□□□ 0.72
PDLIM2-204ENST00000397760 OR52K1Q8NGK4 314 aa19.53■□□□□ 0.72
PDLIM2-204ENST00000397760 MYLIPQ8WY64 445 aa19.53■□□□□ 0.72
PDLIM2-204ENST00000397760 WDR83Q9BRX9 315 aaKnown RBP19.53■□□□□ 0.72
PDLIM2-204ENST00000397760 HPS4Q9NQG7 708 aa19.53■□□□□ 0.72
PDLIM2-204ENST00000397760 PIH1D1Q9NWS0 290 aaKnown RBP19.53■□□□□ 0.72
PDLIM2-204ENST00000397760 TRIM24O15164 1050 aa19.52■□□□□ 0.72
PDLIM2-204ENST00000397760 ELK3P41970 407 aa19.52■□□□□ 0.72
PDLIM2-204ENST00000397760 DMC1Q14565 340 aa19.52■□□□□ 0.72
PDLIM2-204ENST00000397760 HHATQ5VTY9 493 aa19.52■□□□□ 0.72
PDLIM2-204ENST00000397760 ALG1LQ6GMV1 187 aa19.52■□□□□ 0.72
PDLIM2-204ENST00000397760 AGGF1Q8N302 714 aaeCLIP19.52■□□□□ 0.72
PDLIM2-204ENST00000397760 FBXO36Q8NEA4 188 aa19.52■□□□□ 0.72
PDLIM2-204ENST00000397760 RMDN2Q96LZ7 410 aa19.52■□□□□ 0.72
PDLIM2-204ENST00000397760 RAB3IPQ96QF0 476 aaPredicted RBP19.52■□□□□ 0.72
PDLIM2-204ENST00000397760 TBL1YQ9BQ87 522 aa19.52■□□□□ 0.72
PDLIM2-204ENST00000397760 APOL2Q9BQE5 337 aa19.52■□□□□ 0.72
PDLIM2-204ENST00000397760 VPS45Q9NRW7 570 aa19.52■□□□□ 0.72
PDLIM2-204ENST00000397760 BAIAP2L1Q9UHR4 511 aa19.52■□□□□ 0.72
PDLIM2-204ENST00000397760 FCF1Q9Y324 198 aaKnown RBP19.52■□□□□ 0.72
PDLIM2-204ENST00000397760 MYO18AQ92614 2054 aaKnown RBP19.52■□□□□ 0.71
PDLIM2-204ENST00000397760 OTOL1A6NHN0 477 aaPredicted RBP19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 K7ERQ8 282 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 ECI2O75521 394 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 GJB3O75712 270 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 SP100P23497 879 aaPredicted RBP19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 RPA3P35244 121 aaPredicted RBP19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 CTSOP43234 321 aaPredicted RBP19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 RGRP47804 291 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 DGKGP49619 791 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 SESN2P58004 480 aaPredicted RBP19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 MGAT5Q09328 741 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 PCSK7Q16549 785 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 KDELC1Q6UW63 502 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 C3orf62Q6ZUJ4 267 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 MTSS1LQ765P7 747 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 Q7L0L9 218 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 KIAA0907Q7Z7F0 614 aaPredicted RBP19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 LINC00523Q86TU6 105 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 DNAAF3Q8N9W5 541 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 TADA1Q96BN2 335 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 EXOC2Q96KP1 924 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 MRGPRX2Q96LB1 330 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 CDX2Q99626 313 aaPredicted RBP19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 RPP25Q9BUL9 199 aaKnown RBP19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 FICDQ9BVA6 458 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 FSD1LQ9BXM9 530 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 CASS4Q9NQ75 786 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 EPS15L1Q9UBC2 864 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 CHMP2BQ9UQN3 213 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 TEX264Q9Y6I9 313 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 GRXCR2A6NFK2 248 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 SPAG7O75391 227 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 WFS1O76024 890 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 CISD3P0C7P0 127 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 KCNA5P22460 613 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 SERPINH1P50454 418 aaKnown RBP19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 SCNN1BP51168 640 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 WNT3AP56704 352 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 RHOAP61586 193 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 IHHQ14623 411 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 SKIV2LQ15477 1246 aaKnown RBP19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 KDELC2Q7Z4H8 507 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 ADIPOR2Q86V24 386 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 C12orf40Q86WS4 652 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 RNF135Q8IUD6 432 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 IGDCC3Q8IVU1 814 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 PALM2Q8IXS6 379 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 AHI1Q8N157 1196 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 LRRC39Q96DD0 335 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 RPL10LQ96L21 214 aaKnown RBP19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 SIGLEC10Q96LC7 697 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 PAIP2Q9BPZ3 127 aaKnown RBP19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 VPS11Q9H270 941 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 UBE2ZQ9H832 354 aaPredicted RBP19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 LHX3Q9UBR4 397 aa19.51■□□□□ 0.71
PDLIM2-204ENST00000397760 CXorf51AA0A1B0GTR3 108 aa19.5■□□□□ 0.71
PDLIM2-204ENST00000397760 TULP3O75386 442 aa19.5■□□□□ 0.71
PDLIM2-204ENST00000397760 FAM155BO75949 473 aa19.5■□□□□ 0.71
PDLIM2-204ENST00000397760 CR2P20023 1033 aa19.5■□□□□ 0.71
PDLIM2-204ENST00000397760 CCND1P24385 295 aa19.5■□□□□ 0.71
PDLIM2-204ENST00000397760 ADRA1AP35348 466 aa19.5■□□□□ 0.71
PDLIM2-204ENST00000397760 SULT2A1Q06520 285 aa19.5■□□□□ 0.71
PDLIM2-204ENST00000397760 SF3A3Q12874 501 aaKnown RBP eCLIP19.5■□□□□ 0.71
PDLIM2-204ENST00000397760 DNAJC3Q13217 504 aa19.5■□□□□ 0.71
PDLIM2-204ENST00000397760 RUNX3Q13761 415 aa19.5■□□□□ 0.71
PDLIM2-204ENST00000397760 METTL3Q86U44 580 aaKnown RBP19.5■□□□□ 0.71
PDLIM2-204ENST00000397760 ETFBKMTQ8IXQ9 262 aa19.5■□□□□ 0.71
PDLIM2-204ENST00000397760 MPP5Q8N3R9 675 aa19.5■□□□□ 0.71
PDLIM2-204ENST00000397760 CPA6Q8N4T0 437 aa19.5■□□□□ 0.71
PDLIM2-204ENST00000397760 MZB1Q8WU39 189 aa19.5■□□□□ 0.71
PDLIM2-204ENST00000397760 INPP5DQ92835 1189 aa19.5■□□□□ 0.71
PDLIM2-204ENST00000397760 TMEM237Q96Q45 408 aa19.5■□□□□ 0.71
PDLIM2-204ENST00000397760 LRRC37BQ96QE4 947 aa19.5■□□□□ 0.71
PDLIM2-204ENST00000397760 CYTH2Q99418 400 aa19.5■□□□□ 0.71
PDLIM2-204ENST00000397760 PAFAH2Q99487 392 aa19.5■□□□□ 0.71
PDLIM2-204ENST00000397760 TRMT61BQ9BVS5 477 aaKnown RBP19.5■□□□□ 0.71
PDLIM2-204ENST00000397760 SCUBE2Q9NQ36 999 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms