RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 NOMO1Q15155 1222 aa21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 ALG1LQ6GMV1 187 aa21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 NEK5Q6P3R8 708 aa21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 HORMAD1Q86X24 394 aa21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 C1orf216Q8TAB5 229 aa21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 HCAR2Q8TDS4 363 aa21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 UBE2Q2Q8WVN8 375 aa21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 ECHDC3Q96DC8 303 aa21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 QKIQ96PU8 341 aaKnown RBP eCLIP21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 EBF2Q9HAK2 575 aa21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 PCDHGC4Q9Y5F7 938 aa21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 CACNA1EQ15878 2313 aa21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 UPK3BL1B0FP48 263 aa21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 UPK3BL2E5RIL1 263 aa21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 TRAFD1O14545 582 aaPredicted RBP21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 AREL1O15033 823 aa21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 ZSCAN12O43309 604 aa21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 SOCS5O75159 536 aa21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 OTUD4Q01804 1114 aaKnown RBP21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 TRAF2Q12933 501 aa21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 RPS6KA1Q15418 735 aa21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 UGP2Q16851 508 aa21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 FAM182AQ5T1J6 154 aa21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 SEL1L3Q68CR1 1132 aa21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 SLC23A3Q6PIS1 610 aa21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 PRPF39Q86UA1 669 aaKnown RBP21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 CNTD1Q8N815 330 aa21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 ACTL9Q8TC94 416 aa21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 PDCD6IPQ8WUM4 868 aaKnown RBP21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 TM9SF3Q9HD45 589 aa21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 ZFR2Q9UPR6 939 aaKnown RBP21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 ATP8A1Q9Y2Q0 1164 aa21.38■■□□□ 1.01
TSPAN4-206ENST00000397408 LAMA1P25391 3075 aa21.37■■□□□ 1.01
TSPAN4-206ENST00000397408 CFAP54Q96N23 3096 aa21.37■■□□□ 1.01
TSPAN4-206ENST00000397408 TRPM6Q9BX84 2022 aa21.37■■□□□ 1.01
TSPAN4-206ENST00000397408 PLXNA2O75051 1894 aa21.37■■□□□ 1.01
TSPAN4-206ENST00000397408 TSPAN6O43657 245 aa21.37■■□□□ 1.01
TSPAN4-206ENST00000397408 FOXD2O60548 495 aaPredicted RBP21.37■■□□□ 1.01
TSPAN4-206ENST00000397408 PRKCGP05129 697 aa21.37■■□□□ 1.01
TSPAN4-206ENST00000397408 SERPINF2P08697 491 aa21.37■■□□□ 1.01
TSPAN4-206ENST00000397408 ITIH2P19823 946 aa21.37■■□□□ 1.01
TSPAN4-206ENST00000397408 IRX4P78413 519 aa21.37■■□□□ 1.01
TSPAN4-206ENST00000397408 AASDHQ4L235 1098 aaPredicted RBP21.37■■□□□ 1.01
TSPAN4-206ENST00000397408 SETMARQ53H47 684 aaPredicted RBP21.37■■□□□ 1.01
TSPAN4-206ENST00000397408 SEL1L2Q5TEA6 688 aa21.37■■□□□ 1.01
TSPAN4-206ENST00000397408 KIAA1161Q6NSJ0 714 aa21.37■■□□□ 1.01
TSPAN4-206ENST00000397408 REXO1L1PQ8IX06 675 aa21.37■■□□□ 1.01
TSPAN4-206ENST00000397408 KLK6Q92876 244 aa21.37■■□□□ 1.01
TSPAN4-206ENST00000397408 SLC6A18Q96N87 628 aa21.37■■□□□ 1.01
TSPAN4-206ENST00000397408 NUSAP1Q9BXS6 441 aaKnown RBP21.37■■□□□ 1.01
TSPAN4-206ENST00000397408 CAPN10Q9HC96 672 aa21.37■■□□□ 1.01
TSPAN4-206ENST00000397408 PCDH12Q9NPG4 1184 aa21.37■■□□□ 1.01
TSPAN4-206ENST00000397408 FSCN3Q9NQT6 498 aa21.37■■□□□ 1.01
TSPAN4-206ENST00000397408 SLC6A14Q9UN76 642 aa21.37■■□□□ 1.01
TSPAN4-206ENST00000397408 DOCK9Q9BZ29 2069 aa21.36■■□□□ 1.01
TSPAN4-206ENST00000397408 LNP1A1A4G5 178 aa21.36■■□□□ 1.01
TSPAN4-206ENST00000397408 HACD1B0YJ81 288 aa21.36■■□□□ 1.01
TSPAN4-206ENST00000397408 PRR5-ARHGAP8B1AHC4 643 aa21.36■■□□□ 1.01
TSPAN4-206ENST00000397408 H7C0C1 242 aa21.36■■□□□ 1.01
TSPAN4-206ENST00000397408 HTRA2O43464 458 aaPredicted RBP21.36■■□□□ 1.01
TSPAN4-206ENST00000397408 PRLRP16471 622 aa21.36■■□□□ 1.01
TSPAN4-206ENST00000397408 PTPN3P26045 913 aa21.36■■□□□ 1.01
TSPAN4-206ENST00000397408 ATP5OP48047 213 aa21.36■■□□□ 1.01
TSPAN4-206ENST00000397408 SUOXP51687 545 aa21.36■■□□□ 1.01
TSPAN4-206ENST00000397408 RPS21P63220 83 aaKnown RBP21.36■■□□□ 1.01
TSPAN4-206ENST00000397408 NIPAL4Q0D2K0 466 aa21.36■■□□□ 1.01
TSPAN4-206ENST00000397408 ELP6Q0PNE2 266 aa21.36■■□□□ 1.01
TSPAN4-206ENST00000397408 XRCC4Q13426 336 aa21.36■■□□□ 1.01
TSPAN4-206ENST00000397408 ZNF284Q2VY69 593 aa21.36■■□□□ 1.01
TSPAN4-206ENST00000397408 TMEM259Q4ZIN3 620 aa21.36■■□□□ 1.01
TSPAN4-206ENST00000397408 SLC45A4Q5BKX6 768 aa21.36■■□□□ 1.01
TSPAN4-206ENST00000397408 ARRDC2Q8TBH0 407 aa21.36■■□□□ 1.01
TSPAN4-206ENST00000397408 FEM1CQ96JP0 617 aa21.36■■□□□ 1.01
TSPAN4-206ENST00000397408 SERAC1Q96JX3 654 aa21.36■■□□□ 1.01
TSPAN4-206ENST00000397408 AGAP3Q96P47 875 aa21.36■■□□□ 1.01
TSPAN4-206ENST00000397408 FAM118BQ9BPY3 351 aa21.36■■□□□ 1.01
TSPAN4-206ENST00000397408 RXFP3Q9NSD7 469 aa21.36■■□□□ 1.01
TSPAN4-206ENST00000397408 TRMT1Q9NXH9 659 aaKnown RBP21.36■■□□□ 1.01
TSPAN4-206ENST00000397408 GOLGA6L9A6NEM1 432 aa21.35■■□□□ 1.01
TSPAN4-206ENST00000397408 MTSS1O43312 755 aa21.35■■□□□ 1.01
TSPAN4-206ENST00000397408 CPP00450 1065 aa21.35■■□□□ 1.01
TSPAN4-206ENST00000397408 CES1P23141 567 aa21.35■■□□□ 1.01
TSPAN4-206ENST00000397408 NUDT1P36639 197 aa21.35■■□□□ 1.01
TSPAN4-206ENST00000397408 AFF3P51826 1226 aaKnown RBP21.35■■□□□ 1.01
TSPAN4-206ENST00000397408 LMNB2Q03252 620 aa21.35■■□□□ 1.01
TSPAN4-206ENST00000397408 NAPEPLDQ6IQ20 393 aa21.35■■□□□ 1.01
TSPAN4-206ENST00000397408 ERAP2Q6P179 960 aa21.35■■□□□ 1.01
TSPAN4-206ENST00000397408 LAYNQ6UX15 382 aa21.35■■□□□ 1.01
TSPAN4-206ENST00000397408 EDEM2Q9BV94 578 aa21.35■■□□□ 1.01
TSPAN4-206ENST00000397408 AASDHPPTQ9NRN7 309 aa21.35■■□□□ 1.01
TSPAN4-206ENST00000397408 DMTF1Q9Y222 760 aa21.35■■□□□ 1.01
TSPAN4-206ENST00000397408 PCDHB9Q9Y5E1 797 aa21.35■■□□□ 1.01
TSPAN4-206ENST00000397408 RAI2Q9Y5P3 530 aa21.35■■□□□ 1.01
TSPAN4-206ENST00000397408 CEP250Q9BV73 2442 aa21.34■■□□□ 1.01
TSPAN4-206ENST00000397408 A0A1W2PQ67 120 aa21.34■■□□□ 1.01
TSPAN4-206ENST00000397408 KCNK3O14649 394 aa21.34■■□□□ 1.01
TSPAN4-206ENST00000397408 SLC31A1O15431 190 aa21.34■■□□□ 1.01
TSPAN4-206ENST00000397408 MMP12P39900 470 aa21.34■■□□□ 1.01
TSPAN4-206ENST00000397408 CSNK1EP49674 416 aaKnown RBP21.34■■□□□ 1.01
TSPAN4-206ENST00000397408 EIF3EP60228 445 aaKnown RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms