RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 CCDC13Q8IYE1 715 aa9.55□□□□□ -0.88
NEDD9-203ENST00000397378 SLC34A3Q8N130 599 aa9.55□□□□□ -0.88
NEDD9-203ENST00000397378 OR6C4Q8NGE1 309 aa9.55□□□□□ -0.88
NEDD9-203ENST00000397378 PCDH19Q8TAB3 1148 aa9.55□□□□□ -0.88
NEDD9-203ENST00000397378 SCG3Q8WXD2 468 aaKnown RBP9.55□□□□□ -0.88
NEDD9-203ENST00000397378 SNX21Q969T3 373 aa9.55□□□□□ -0.88
NEDD9-203ENST00000397378 KIAA1143Q96AT1 154 aaPredicted RBP9.55□□□□□ -0.88
NEDD9-203ENST00000397378 CENPTQ96BT3 561 aa9.55□□□□□ -0.88
NEDD9-203ENST00000397378 CCDC34Q96HJ3 373 aa9.55□□□□□ -0.88
NEDD9-203ENST00000397378 CEP63Q96MT8 703 aa9.55□□□□□ -0.88
NEDD9-203ENST00000397378 HAPLN3Q96S86 360 aa9.55□□□□□ -0.88
NEDD9-203ENST00000397378 B3GNT4Q9C0J1 378 aa9.55□□□□□ -0.88
NEDD9-203ENST00000397378 SIK2Q9H0K1 926 aa9.55□□□□□ -0.88
NEDD9-203ENST00000397378 GPN2Q9H9Y4 310 aaPredicted RBP9.55□□□□□ -0.88
NEDD9-203ENST00000397378 RMND1Q9NWS8 449 aa9.55□□□□□ -0.88
NEDD9-203ENST00000397378 ARHGEF38Q9NXL2 777 aa9.55□□□□□ -0.88
NEDD9-203ENST00000397378 ERRFI1Q9UJM3 462 aaPredicted RBP9.55□□□□□ -0.88
NEDD9-203ENST00000397378 PNMA8BQ9ULN7 279 aaPredicted RBP9.55□□□□□ -0.88
NEDD9-203ENST00000397378 CSMD2Q7Z408 3487 aa9.55□□□□□ -0.88
NEDD9-203ENST00000397378 IGLV3-10A0A075B6K4 115 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 CXorf51AA0A1B0GTR3 108 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 ILVBLA1L0T0 632 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 TRIM49BA6NDI0 452 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 HNRNPRO43390 633 aaKnown RBP9.54□□□□□ -0.88
NEDD9-203ENST00000397378 DIAPH2O60879 1101 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 ZMPSTE24O75844 475 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 LDLRP01130 860 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 CELA2BP08218 269 aaPredicted RBP9.54□□□□□ -0.88
NEDD9-203ENST00000397378 ALPIP09923 528 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 KRT5P13647 590 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 GNA15P30679 374 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 IGFALSP35858 605 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 ABL2P42684 1182 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 BLKP51451 505 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 ARSDP51689 593 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 CCNHP51946 323 aaPredicted RBP9.54□□□□□ -0.88
NEDD9-203ENST00000397378 COPB1P53618 953 aaKnown RBP9.54□□□□□ -0.88
NEDD9-203ENST00000397378 KRT85P78386 507 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 PPARDQ03181 441 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 NME3Q13232 169 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 ELOCQ15369 112 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 CARD16Q5EG05 197 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 EFHC2Q5JST6 749 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 ACBD5Q5T8D3 534 aaPredicted RBP9.54□□□□□ -0.88
NEDD9-203ENST00000397378 ATP1A1-AS1Q5TC04 95 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 TCTN3Q6NUS6 607 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 LRRC31Q6UY01 552 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 MACC1Q6ZN28 852 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 FSTL5Q8N475 847 aaPredicted RBP9.54□□□□□ -0.88
NEDD9-203ENST00000397378 EHBP1Q8NDI1 1231 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 PMEPA1Q969W9 287 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 ISG20Q96AZ6 181 aaKnown RBP9.54□□□□□ -0.88
NEDD9-203ENST00000397378 ARHGEF26Q96DR7 871 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 C1orf74Q96LT6 269 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 GSDMAQ96QA5 445 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 TAAR9Q96RI9 348 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 CPXM1Q96SM3 734 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 GTPBP4Q9BZE4 634 aaKnown RBP9.54□□□□□ -0.88
NEDD9-203ENST00000397378 INTS2Q9H0H0 1204 aaKnown RBP9.54□□□□□ -0.88
NEDD9-203ENST00000397378 SEMA6CQ9H3T2 930 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 RRN3Q9NYV6 651 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 MAP10Q9P2G4 905 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 ITGB1BP2Q9UKP3 347 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 NF1P21359 2839 aa9.54□□□□□ -0.88
NEDD9-203ENST00000397378 RP1L1Q8IWN7 2480 aaPredicted RBP9.54□□□□□ -0.88
NEDD9-203ENST00000397378 C16orf96A6NNT2 1141 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 I6L893 689 aaPredicted RBP9.53□□□□□ -0.88
NEDD9-203ENST00000397378 NEMP1O14524 444 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 AREL1O15033 823 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 THAP12O43422 761 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 DAB1O75553 588 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 GRAP2O75791 330 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 ENDOD1O94919 500 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 ADCY5O95622 1261 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 CTSEP14091 401 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 TCN2P20062 427 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 OR1E1P30953 314 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 EIF4A3P38919 411 aaKnown RBP9.53□□□□□ -0.88
NEDD9-203ENST00000397378 CXCR3P49682 368 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 PEX5P50542 639 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 ARF5P84085 180 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 PNOCQ13519 176 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 ARHGAP44Q17R89 818 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 ZNF805Q5CZA5 627 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 ARTNQ5T4W7 220 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 OTUD1Q5VV17 481 aaPredicted RBP9.53□□□□□ -0.88
NEDD9-203ENST00000397378 OLFML1Q6UWY5 402 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 C11orf57Q6ZUT1 292 aaPredicted RBP9.53□□□□□ -0.88
NEDD9-203ENST00000397378 SLC26A9Q7LBE3 791 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 TFAP2DQ7Z6R9 452 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 SLITRK4Q8IW52 837 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 WDTC1Q8N5D0 677 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 RCBTB1Q8NDN9 531 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 ZNF397Q8NF99 534 aaPredicted RBP9.53□□□□□ -0.88
NEDD9-203ENST00000397378 OR7D4Q8NG98 312 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 PGAP3Q96FM1 320 aaPredicted RBP9.53□□□□□ -0.88
NEDD9-203ENST00000397378 TCTN2Q96GX1 697 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 NPY6RQ99463 290 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 C1QTNF7Q9BXJ2 289 aa9.53□□□□□ -0.88
NEDD9-203ENST00000397378 TKTL2Q9H0I9 626 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms