RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 SNX9Q9Y5X1 595 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 CPQQ9Y646 472 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 CENPFP49454 3210 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 PDPK1O15530 556 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 RFPL2O75678 378 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 APOA4P06727 396 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 SNRPAP09012 282 aaKnown RBP8.49□□□□□ -1.05
NDE1-202ENST00000396355 TMEM253P0C7T8 217 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 COX4I1P13073 169 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 YWHABP31946 246 aaKnown RBP8.49□□□□□ -1.05
NDE1-202ENST00000396355 TRIM32Q13049 653 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 INPP5AQ14642 412 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 SKIV2LQ15477 1246 aaKnown RBP8.49□□□□□ -1.05
NDE1-202ENST00000396355 UAP1L1Q3KQV9 507 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 KLHL12Q53G59 568 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 SHQ1Q6PI26 577 aaKnown RBP8.49□□□□□ -1.05
NDE1-202ENST00000396355 ARSKQ6UWY0 536 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 ZNF555Q8NEP9 628 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 SHKBP1Q8TBC3 707 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 KCNN1Q92952 543 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 MS4A4AQ96JQ5 239 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 PCDHAC1Q9H158 963 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 SERHL2Q9H4I8 314 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 ABI2Q9NYB9 513 aaPredicted RBP8.49□□□□□ -1.05
NDE1-202ENST00000396355 EGFL7Q9UHF1 273 aa8.49□□□□□ -1.05
NDE1-202ENST00000396355 OAS1P00973 400 aaKnown RBP8.48□□□□□ -1.05
NDE1-202ENST00000396355 PROS1P07225 676 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 XRCC1P18887 633 aaPredicted RBP8.48□□□□□ -1.05
NDE1-202ENST00000396355 NPEPPSP55786 919 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 P2RX3P56373 397 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 FKBP1AP62942 108 aaKnown RBP8.48□□□□□ -1.05
NDE1-202ENST00000396355 PRKCQQ04759 706 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 FPGSQ05932 587 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 MTERF2Q49AM1 385 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 AASDHQ4L235 1098 aaPredicted RBP8.48□□□□□ -1.05
NDE1-202ENST00000396355 FASTKD1Q53R41 847 aaKnown RBP8.48□□□□□ -1.05
NDE1-202ENST00000396355 DENND5AQ6IQ26 1287 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 ZFP1Q6P2D0 407 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 DPY19L3Q6ZPD9 716 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 ENKURQ8TC29 256 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 S100ZQ8WXG8 99 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 AGPAT1Q99943 283 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 CBWD1Q9BRT8 395 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 TXLNGYQ9BZA5 131 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 DHX35Q9H5Z1 703 aaKnown RBP8.48□□□□□ -1.05
NDE1-202ENST00000396355 PNPOQ9NVS9 261 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 GABRQQ9UN88 632 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 TMX2Q9Y320 296 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 TRPM7Q96QT4 1865 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 APRTP07741 180 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 CD19P15391 556 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 PIGFQ07326 219 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 MMRN1Q13201 1228 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 MOGSQ13724 837 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 RAB39AQ14964 217 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 TBCCQ15814 346 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 XKR9Q5GH70 373 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 RNF135Q8IUD6 432 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 SPARTQ8N0X7 666 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 CDKL2Q92772 493 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 HEXIM2Q96MH2 286 aaKnown RBP8.48□□□□□ -1.05
NDE1-202ENST00000396355 ZNF577Q9BSK1 485 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 TRIM45Q9H8W5 580 aaPredicted RBP8.48□□□□□ -1.05
NDE1-202ENST00000396355 RDH8Q9NYR8 311 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 CRNNQ9UBG3 495 aaPredicted RBP8.48□□□□□ -1.05
NDE1-202ENST00000396355 CORINQ9Y5Q5 1042 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 COL2A1P02458 1487 aaPredicted RBP8.48□□□□□ -1.05
NDE1-202ENST00000396355 CROCCQ5TZA2 2017 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 SYNJ2BP-COX16A0A087WUM0 186 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 SIGLEC16A6NMB1 481 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 PLK4O00444 970 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 APOL1O14791 398 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 GSTA4O15217 222 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 DYRK3O43781 588 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 ENTPD3O75355 529 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 KDM4BO94953 1096 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 GGPS1O95749 300 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 DDCP20711 480 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 GRK3P35626 688 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 CDKL1Q00532 357 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 KRR1Q13601 381 aaKnown RBP8.48□□□□□ -1.05
NDE1-202ENST00000396355 ADGRE1Q14246 886 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 DMC1Q14565 340 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 STILQ15468 1287 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 STXBP2Q15833 593 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 CCDC142Q17RM4 750 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 SPDYCQ5MJ68 293 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 MFSD14CQ5VZR4 134 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 GPR180Q86V85 440 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 CAND1Q86VP6 1230 aaKnown RBP8.48□□□□□ -1.05
NDE1-202ENST00000396355 ANKRD13BQ86YJ7 626 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 HERC6Q8IVU3 1022 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 TIGD4Q8IY51 512 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 PCYOX1LQ8NBM8 494 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 CHURC1Q8WUH1 139 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 CPA5Q8WXQ8 436 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 NCLNQ969V3 563 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 SMAD5Q99717 465 aaKnown RBP8.48□□□□□ -1.05
NDE1-202ENST00000396355 NPAS2Q99743 824 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 TARS2Q9BW92 718 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms