RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 SBK3P0C264 359 aa18.04■□□□□ 0.48
SREBF1-204ENST00000395756 MTA1Q13330 715 aa18.04■□□□□ 0.48
SREBF1-204ENST00000395756 ARL13AQ5H913 290 aaPredicted RBP18.04■□□□□ 0.48
SREBF1-204ENST00000395756 CAPRIN2Q6IMN6 1127 aaKnown RBP18.04■□□□□ 0.48
SREBF1-204ENST00000395756 LINGO4Q6UY18 593 aa18.04■□□□□ 0.48
SREBF1-204ENST00000395756 ARRDC2Q8TBH0 407 aa18.04■□□□□ 0.48
SREBF1-204ENST00000395756 EXT2Q93063 718 aa18.04■□□□□ 0.48
SREBF1-204ENST00000395756 NUF2Q9BZD4 464 aa18.04■□□□□ 0.48
SREBF1-204ENST00000395756 TRPC7Q9HCX4 862 aa18.04■□□□□ 0.48
SREBF1-204ENST00000395756 FAM92AA1XBS5 289 aa18.03■□□□□ 0.48
SREBF1-204ENST00000395756 HEATR9A2RTY3 570 aa18.03■□□□□ 0.48
SREBF1-204ENST00000395756 WASH4PA8MWX3 477 aa18.03■□□□□ 0.48
SREBF1-204ENST00000395756 SIN3BO75182 1162 aa18.03■□□□□ 0.48
SREBF1-204ENST00000395756 PIGNO95427 931 aa18.03■□□□□ 0.48
SREBF1-204ENST00000395756 KLKB1P03952 638 aa18.03■□□□□ 0.48
SREBF1-204ENST00000395756 EPHA3P29320 983 aa18.03■□□□□ 0.48
SREBF1-204ENST00000395756 UGP2Q16851 508 aa18.03■□□□□ 0.48
SREBF1-204ENST00000395756 USP41Q3LFD5 358 aa18.03■□□□□ 0.48
SREBF1-204ENST00000395756 TRIM60Q495X7 471 aa18.03■□□□□ 0.48
SREBF1-204ENST00000395756 TSTD2Q5T7W7 516 aa18.03■□□□□ 0.48
SREBF1-204ENST00000395756 NXNQ6DKJ4 435 aa18.03■□□□□ 0.48
SREBF1-204ENST00000395756 OR13C4Q8NGS5 318 aa18.03■□□□□ 0.48
SREBF1-204ENST00000395756 OR13J1Q8NGT2 312 aa18.03■□□□□ 0.48
SREBF1-204ENST00000395756 HEXDCQ8WVB3 486 aa18.03■□□□□ 0.48
SREBF1-204ENST00000395756 PHF21BQ96EK2 531 aa18.03■□□□□ 0.48
SREBF1-204ENST00000395756 OLFM1Q99784 485 aa18.03■□□□□ 0.48
SREBF1-204ENST00000395756 ATP11BQ9Y2G3 1177 aa18.03■□□□□ 0.48
SREBF1-204ENST00000395756 CAPN14A8MX76 684 aa18.03■□□□□ 0.48
SREBF1-204ENST00000395756 SPECC1L-ADORA2AF8WAN1 911 aa18.03■□□□□ 0.48
SREBF1-204ENST00000395756 COL6A1P12109 1028 aa18.03■□□□□ 0.48
SREBF1-204ENST00000395756 HNRNPLP14866 589 aaKnown RBP eCLIP18.03■□□□□ 0.48
SREBF1-204ENST00000395756 TSPAN8P19075 237 aa18.03■□□□□ 0.48
SREBF1-204ENST00000395756 CCND1P24385 295 aa18.03■□□□□ 0.48
SREBF1-204ENST00000395756 ELAVL2Q12926 359 aaKnown RBP18.03■□□□□ 0.48
SREBF1-204ENST00000395756 SLC5A9Q2M3M2 681 aa18.03■□□□□ 0.48
SREBF1-204ENST00000395756 ARMCX6Q7L4S7 300 aa18.03■□□□□ 0.48
SREBF1-204ENST00000395756 LRRC43Q8N309 656 aa18.03■□□□□ 0.48
SREBF1-204ENST00000395756 PHTF2Q8N3S3 785 aa18.03■□□□□ 0.48
SREBF1-204ENST00000395756 DRAXINQ8NBI3 349 aaPredicted RBP18.03■□□□□ 0.48
SREBF1-204ENST00000395756 MARK4Q96L34 752 aa18.03■□□□□ 0.48
SREBF1-204ENST00000395756 CCDC106Q9BWC9 280 aa18.03■□□□□ 0.48
SREBF1-204ENST00000395756 C1QTNF1Q9BXJ1 281 aa18.03■□□□□ 0.48
SREBF1-204ENST00000395756 OXSMQ9NWU1 459 aa18.03■□□□□ 0.48
SREBF1-204ENST00000395756 TMEM233B4DJY2 109 aa18.02■□□□□ 0.48
SREBF1-204ENST00000395756 TBC1D4O60343 1298 aa18.02■□□□□ 0.48
SREBF1-204ENST00000395756 SERPINA6P08185 405 aa18.02■□□□□ 0.48
SREBF1-204ENST00000395756 LRRC8EQ6NSJ5 796 aa18.02■□□□□ 0.48
SREBF1-204ENST00000395756 PIM3Q86V86 326 aa18.02■□□□□ 0.48
SREBF1-204ENST00000395756 SREK1Q8WXA9 508 aaKnown RBP18.02■□□□□ 0.48
SREBF1-204ENST00000395756 RMDN1Q96DB5 314 aa18.02■□□□□ 0.48
SREBF1-204ENST00000395756 DNAJC1Q96KC8 554 aaKnown RBP18.02■□□□□ 0.48
SREBF1-204ENST00000395756 OR52B2Q96RD2 323 aa18.02■□□□□ 0.48
SREBF1-204ENST00000395756 MCMBPQ9BTE3 642 aa18.02■□□□□ 0.48
SREBF1-204ENST00000395756 MRPL9Q9BYD2 267 aaKnown RBP18.02■□□□□ 0.48
SREBF1-204ENST00000395756 UBE2OQ9C0C9 1292 aaKnown RBP18.02■□□□□ 0.48
SREBF1-204ENST00000395756 PRRC2BQ5JSZ5 2229 aaKnown RBP18.02■□□□□ 0.48
SREBF1-204ENST00000395756 IGLV3-10A0A075B6K4 115 aa18.02■□□□□ 0.48
SREBF1-204ENST00000395756 DLX3O60479 287 aa18.02■□□□□ 0.48
SREBF1-204ENST00000395756 ACSL4O60488 711 aa18.02■□□□□ 0.48
SREBF1-204ENST00000395756 CORO1AP31146 461 aaKnown RBP18.02■□□□□ 0.48
SREBF1-204ENST00000395756 RGRP47804 291 aa18.02■□□□□ 0.48
SREBF1-204ENST00000395756 NRG1Q02297 640 aaPredicted RBP18.02■□□□□ 0.48
SREBF1-204ENST00000395756 KRT72Q14CN4 511 aa18.02■□□□□ 0.48
SREBF1-204ENST00000395756 PDCD2Q16342 344 aaPredicted RBP18.02■□□□□ 0.48
SREBF1-204ENST00000395756 LRRC49Q8IUZ0 686 aa18.02■□□□□ 0.48
SREBF1-204ENST00000395756 TMEM151AQ8N4L1 468 aa18.02■□□□□ 0.48
SREBF1-204ENST00000395756 ISL2Q96A47 359 aa18.02■□□□□ 0.48
SREBF1-204ENST00000395756 CLSTN3Q9BQT9 956 aa18.02■□□□□ 0.48
SREBF1-204ENST00000395756 TUBB6Q9BUF5 446 aa18.02■□□□□ 0.48
SREBF1-204ENST00000395756 POLR1EQ9GZS1 481 aaKnown RBP18.02■□□□□ 0.48
SREBF1-204ENST00000395756 TAGLN3Q9UI15 199 aa18.02■□□□□ 0.48
SREBF1-204ENST00000395756 ZNF232Q9UNY5 417 aa18.02■□□□□ 0.48
SREBF1-204ENST00000395756 PTPRDP23468 1912 aa18.02■□□□□ 0.47
SREBF1-204ENST00000395756 ZNF840PA6NDX5 716 aa18.01■□□□□ 0.47
SREBF1-204ENST00000395756 TRAFD1O14545 582 aaPredicted RBP18.01■□□□□ 0.47
SREBF1-204ENST00000395756 PEX11AO75192 247 aa18.01■□□□□ 0.47
SREBF1-204ENST00000395756 CCDC166P0CW27 439 aa18.01■□□□□ 0.47
SREBF1-204ENST00000395756 TUBB3Q13509 450 aa18.01■□□□□ 0.47
SREBF1-204ENST00000395756 TMC7Q7Z402 723 aa18.01■□□□□ 0.47
SREBF1-204ENST00000395756 GPAMQ9HCL2 828 aa18.01■□□□□ 0.47
SREBF1-204ENST00000395756 CHCHD3Q9NX63 227 aaKnown RBP18.01■□□□□ 0.47
SREBF1-204ENST00000395756 NSMCE4AQ9NXX6 385 aa18.01■□□□□ 0.47
SREBF1-204ENST00000395756 ZNF212Q9UDV6 495 aa18.01■□□□□ 0.47
SREBF1-204ENST00000395756 PACSIN3Q9UKS6 424 aa18.01■□□□□ 0.47
SREBF1-204ENST00000395756 PCDHB12Q9Y5F1 795 aa18.01■□□□□ 0.47
SREBF1-204ENST00000395756 DRGXA6NNA5 263 aa18.01■□□□□ 0.47
SREBF1-204ENST00000395756 SERPINB5P36952 375 aa18.01■□□□□ 0.47
SREBF1-204ENST00000395756 CDK18Q07002 472 aa18.01■□□□□ 0.47
SREBF1-204ENST00000395756 HECTD3Q5T447 861 aa18.01■□□□□ 0.47
SREBF1-204ENST00000395756 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.01■□□□□ 0.471e-6■■■■■ 38.3
SREBF1-204ENST00000395756 C2CD4AQ8NCU7 369 aaPredicted RBP18.01■□□□□ 0.47
SREBF1-204ENST00000395756 SPATA17Q96L03 361 aa18.01■□□□□ 0.47
SREBF1-204ENST00000395756 ILKAPQ9H0C8 392 aaPredicted RBP18.01■□□□□ 0.47
SREBF1-204ENST00000395756 ZDHHC2Q9UIJ5 367 aa18.01■□□□□ 0.47
SREBF1-204ENST00000395756 PCDHGC4Q9Y5F7 938 aa18.01■□□□□ 0.47
SREBF1-204ENST00000395756 MYO16Q9Y6X6 1858 aa18.01■□□□□ 0.47
SREBF1-204ENST00000395756 PITPNM1O00562 1244 aa18.01■□□□□ 0.47
SREBF1-204ENST00000395756 PRRG1O14668 218 aa18.01■□□□□ 0.47
SREBF1-204ENST00000395756 JUNP05412 331 aaKnown RBP18.01■□□□□ 0.47
SREBF1-204ENST00000395756 SLC11A2P49281 568 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms